Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15558 Sequoiadendron giganteum HOM05D001013 ORTHO05D004597 3.8e-96 354.8 168 100.0
ECA238G2654 Erigeron canadensis HOM05D001013 ORTHO05D004597 8.0e-30 134.4 82 78.0
Pp3c20_16340 Physcomitrium patens HOM05D001013 ORTHO05D004597 1.0e-29 134.0 82 78.0
Ciclev10014051m.g Citrus clementina HOM05D001013 ORTHO05D004597 6.8e-29 131.3 79 81.0
Lsat_1_v5_gn_2_97521 Lactuca sativa HOM05D001013 ORTHO05D004597 6.8e-29 131.3 82 79.3
ATR0605G208 Amborella trichopoda HOM05D001013 ORTHO05D004597 8.8e-29 131.0 82 75.6
DCAR_002067 Daucus carota HOM05D001013 ORTHO05D004597 8.8e-29 131.0 79 79.7
Lsat_1_v5_gn_2_97481 Lactuca sativa HOM05D001013 ORTHO05D004597 8.8e-29 131.0 80 78.8
AagrBONN_evm.TU.Sc2ySwM_228.138 Anthoceros agrestis HOM05D001013 ORTHO05D004597 2.6e-28 129.4 82 75.6
Migut.D00590 Erythranthe guttata HOM05D001013 ORTHO05D004597 2.6e-28 129.4 82 78.0
ECA238G2169 Erigeron canadensis HOM05D001013 ORTHO05D004597 4.4e-28 128.6 82 76.8
PSO384G0041 Papaver somniferum HOM05D001013 ORTHO05D004597 4.4e-28 128.6 82 74.4
PSO384G2146 Papaver somniferum HOM05D001013 ORTHO05D004597 4.4e-28 128.6 82 74.4
Ah.06g194350 Amaranthus hybridus HOM05D001013 ORTHO05D004597 9.8e-28 127.5 80 78.8
MSTRG.18423 Avicennia marina HOM05D001013 ORTHO05D004597 9.8e-28 127.5 82 76.8
Manes.06G165500 Manihot esculenta HOM05D001013 ORTHO05D004597 1.3e-27 127.1 79 78.5
Solyc11g065920.2 Solanum lycopersicum HOM05D001013 ORTHO05D004597 1.3e-27 127.1 82 75.6
Sopen11g025660 Solanum pennellii HOM05D001013 ORTHO05D004597 1.3e-27 127.1 82 75.6
Atru.chr3.2746 Acer truncatum HOM05D001013 ORTHO05D004597 1.7e-27 126.7 94 67.0
CSS0021836 Camellia sinensis var. sinensis HOM05D001013 ORTHO05D004597 1.7e-27 126.7 82 76.8
Nn2g15465 Nelumbo nucifera HOM05D001013 ORTHO05D004597 1.7e-27 126.7 79 79.7
PGR119G0568 Punica granatum HOM05D001013 ORTHO05D004597 1.7e-27 126.7 79 78.5
SMO351G0580 Selaginella moellendorffii HOM05D001013 ORTHO05D004597 1.7e-27 126.7 82 72.0
TAR633G1179 Trochodendron aralioides HOM05D001013 ORTHO05D004597 1.7e-27 126.7 79 78.5
COL.COLO4_24880 Corchorus olitorius HOM05D001013 ORTHO05D004597 2.2e-27 126.3 79 78.5
GSVIVG01025282001 Vitis vinifera HOM05D001013 ORTHO05D004597 2.2e-27 126.3 80 76.2
EL10Ac4g10268 Beta vulgaris HOM05D001013 ORTHO05D004597 2.8e-27 125.9 80 77.5
EL10Ac4g10284 Beta vulgaris HOM05D001013 ORTHO05D004597 2.8e-27 125.9 80 77.5
Lalb_Chr24g0397071 Lupinus albus HOM05D001013 ORTHO05D004597 2.8e-27 125.9 79 78.5
CAN.G327.12 Capsicum annuum HOM05D001013 ORTHO05D004597 3.7e-27 125.6 82 75.6
Cc07_g19600 Coffea canephora HOM05D001013 ORTHO05D004597 3.7e-27 125.6 80 76.2
MELO3C015199.2 Cucumis melo HOM05D001013 ORTHO05D004597 3.7e-27 125.6 79 77.2
Thecc.09G231300 Theobroma cacao HOM05D001013 ORTHO05D004597 3.7e-27 125.6 79 77.2
Aqoxy1G00274 Aquilegia oxysepala HOM05D001013 ORTHO05D004597 4.8e-27 125.2 79 75.9
MBI01_g42707_MAGBIO Magnolia biondii HOM05D001013 ORTHO05D004597 4.8e-27 125.2 78 76.9
SGA_v2.0_scaffold247G44871 Striga asiatica HOM05D001013 ORTHO05D004597 4.8e-27 125.2 95 68.4
CDE05G3370 Ceratophyllum demersum HOM05D001013 ORTHO05D004597 6.3e-27 124.8 78 78.2
CsaV3_1G042760 Cucumis sativus L. HOM05D001013 ORTHO05D004597 8.3e-27 124.4 79 75.9
Dinv36267 Davidia involucrata HOM05D001013 ORTHO05D004597 8.3e-27 124.4 80 77.5
Gohir.A09G114800 Gossypium hirsutum HOM05D001013 ORTHO05D004597 8.3e-27 124.4 79 75.9
Gohir.D09G111500 Gossypium hirsutum HOM05D001013 ORTHO05D004597 8.3e-27 124.4 79 75.9
Gorai.006G129200 Gossypium raimondii HOM05D001013 ORTHO05D004597 8.3e-27 124.4 79 75.9
Psat5g286360 Pisum sativum HOM05D001013 ORTHO05D004597 8.3e-27 124.4 79 78.5
Rhsim13G0222300 Rhododendron simsii HOM05D001013 ORTHO05D004597 8.3e-27 124.4 80 77.5
RcHm_v2.0_Chr5g0051661 Rosa chinensis HOM05D001013 ORTHO05D004597 8.3e-27 124.4 79 79.7
CBR_g30957 Chara braunii HOM05D001013 ORTHO05D004597 1.1e-26 124.0 82 70.7
ClCG03G013290 Citrullus lanatus HOM05D001013 ORTHO05D004597 1.1e-26 124.0 79 75.9
Peaxi162Scf01427g00007 Petunia axillaris HOM05D001013 ORTHO05D004597 1.1e-26 124.0 82 74.4
CANSAT01G2178 Cannabis sativa HOM05D001013 ORTHO05D004597 1.4e-26 123.6 79 75.9
FAN21G2353 Fragaria x ananassa HOM05D001013 ORTHO05D004597 1.4e-26 123.6 79 78.5
FAN25G2450 Fragaria x ananassa HOM05D001013 ORTHO05D004597 1.4e-26 123.6 79 78.5
Medtr2g098030 Medicago truncatula HOM05D001013 ORTHO05D004597 1.8e-26 123.2 79 78.5
HPP92_023576 Vanilla planifolia HOM05D001013 ORTHO05D004597 1.8e-26 123.2 94 66.0
Ca_01292_v3 Cicer arietinum L. HOM05D001013 ORTHO05D004597 2.4e-26 122.9 79 78.5
Eucgr.J00780 Eucalyptus grandis HOM05D001013 ORTHO05D004597 2.4e-26 122.9 79 77.2
AUR62000107 Chenopodium quinoa HOM05D001013 ORTHO05D004597 3.1e-26 122.5 80 75.0
MD11G1197900 Malus domestica HOM05D001013 ORTHO05D004597 3.1e-26 122.5 79 75.9
EL10Ac4g10161 Beta vulgaris HOM05D001013 ORTHO05D004597 4.1e-26 122.1 74 81.1
MD03G1177200 Malus domestica HOM05D001013 ORTHO05D004597 5.4e-26 121.7 79 75.9
Nitab4.5_0006994g0020 Nicotiana tabacum HOM05D001013 ORTHO05D004597 5.4e-26 121.7 82 73.2
QL01p005011 Quercus lobata HOM05D001013 ORTHO05D004597 5.4e-26 121.7 78 76.9
FvH4_3g29000 Fragaria vesca HOM05D001013 ORTHO05D004597 7.0e-26 121.3 79 77.2
FAN11G2909 Fragaria x ananassa HOM05D001013 ORTHO05D004597 7.0e-26 121.3 79 77.2
MD11G1161000 Malus domestica HOM05D001013 ORTHO05D004597 7.0e-26 121.3 79 74.7
AUR62019282 Chenopodium quinoa HOM05D001013 ORTHO05D004597 9.1e-26 120.9 80 73.8
Eucgr.J00782 Eucalyptus grandis HOM05D001013 ORTHO05D004597 9.1e-26 120.9 79 75.9
Nitab4.5_0001800g0150 Nicotiana tabacum HOM05D001013 ORTHO05D004597 9.1e-26 120.9 82 72.0
Duzib170G0402 Durio zibethinus HOM05D001013 ORTHO05D004597 1.2e-25 120.6 79 75.9
TPR.G6821 Trifolium pratense HOM05D001013 ORTHO05D004597 1.2e-25 120.6 79 77.2
TWI34G0448 Tripterygium wilfordii HOM05D001013 ORTHO05D004597 1.2e-25 120.6 77 75.3
Mapoly0014s0136 Marchantia polymorpha HOM05D001013 ORTHO05D004597 1.6e-25 120.2 82 72.0
Potri.009G054600 Populus trichocarpa HOM05D001013 ORTHO05D004597 1.6e-25 120.2 79 75.9
Hund22038 Selenicereus undatus HOM05D001013 ORTHO05D004597 1.6e-25 120.2 80 75.0
Solyc11g065930.3 Solanum lycopersicum HOM05D001013 ORTHO05D004597 1.6e-25 120.2 82 70.7
Sopen11g025670 Solanum pennellii HOM05D001013 ORTHO05D004597 1.6e-25 120.2 82 70.7
Zm00001eb021020 Zea mays HOM05D001013 ORTHO05D004597 1.6e-25 120.2 79 74.7
AT4G34900 Arabidopsis thaliana HOM05D001013 ORTHO05D004597 2.0e-25 119.8 79 74.7
CiPaw.14G119800 Carya illinoinensis HOM05D001013 ORTHO05D004597 2.7e-25 119.4 79 73.4
Actinidia16323 Actinidia chinensis HOM05D001013 ORTHO05D004597 3.5e-25 119.0 73 78.1
Cfa009756 Carpinus fangiana HOM05D001013 ORTHO05D004597 3.5e-25 119.0 79 74.7
Prupe.4G245700 Prunus persica HOM05D001013 ORTHO05D004597 3.5e-25 119.0 79 74.7
Glyma.15G034000 Glycine max HOM05D001013 ORTHO05D004597 4.5e-25 118.6 79 75.9
Sed0014521 Sechium edule HOM05D001013 ORTHO05D004597 4.5e-25 118.6 79 72.2
THA.LOC104817905 Tarenaya hassleriana HOM05D001013 ORTHO05D004597 4.5e-25 118.6 79 74.7
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 4.5e-25 118.6 89 67.4
C01p03910 Brassica napus HOM05D001013 ORTHO05D004597 5.9e-25 118.2 94 63.8
BolC1t00384H Brassica oleracea HOM05D001013 ORTHO05D004597 5.9e-25 118.2 94 63.8
Sabra09G0039900 Salix brachista HOM05D001013 ORTHO05D004597 5.9e-25 118.2 79 74.7
Sp7g32650 Schrenkiella parvula HOM05D001013 ORTHO05D004597 5.9e-25 118.2 94 64.9
TAR636G2042 Trochodendron aralioides HOM05D001013 ORTHO05D004597 5.9e-25 118.2 80 73.8
Carub.0007s0540 Capsella rubella HOM05D001013 ORTHO05D004597 7.7e-25 117.9 79 73.4
AT4G34890 Arabidopsis thaliana HOM05D001013 ORTHO05D004597 1.0e-24 117.5 79 73.4
arahy.Tifrunner.gnm1.ann1.EX6ZD6 Arachis hypogaea HOM05D001013 ORTHO05D004597 1.0e-24 117.5 79 74.7
BcaNung00646 Brassica carinata HOM05D001013 ORTHO05D004597 1.0e-24 117.5 79 72.2
Lj3g0023347 Lotus japonicus HOM05D001013 ORTHO05D004597 1.0e-24 117.5 79 77.2
TAR622G0681 Trochodendron aralioides HOM05D001013 ORTHO05D004597 1.0e-24 117.5 82 67.1
arahy.Tifrunner.gnm1.ann1.I21QA9 Arachis hypogaea HOM05D001013 ORTHO05D004597 1.3e-24 117.1 79 74.7
A01p03620 Brassica napus HOM05D001013 ORTHO05D004597 1.3e-24 117.1 94 63.8
BraA01t00348Z Brassica rapa HOM05D001013 ORTHO05D004597 1.3e-24 117.1 94 63.8
Haze_23121 Corylus avellana HOM05D001013 ORTHO05D004597 1.7e-24 116.7 79 73.4
Thhalv10024224m.g Eutrema salsugineum HOM05D001013 ORTHO05D004597 1.7e-24 116.7 94 64.9
Lj2A632G19 Lonicera japonica HOM05D001013 ORTHO05D004597 1.7e-24 116.7 83 72.3
CARHR250380 Cardamine hirsuta HOM05D001013 ORTHO05D004597 2.2e-24 116.3 80 75.0
VMungo1080G0609 Vigna mungo HOM05D001013 ORTHO05D004597 2.9e-24 115.9 79 74.7
C09p01710 Brassica napus HOM05D001013 ORTHO05D004597 3.8e-24 115.5 80 73.8
BolC9t53105H Brassica oleracea HOM05D001013 ORTHO05D004597 3.8e-24 115.5 80 73.8
AUR62019283 Chenopodium quinoa HOM05D001013 ORTHO05D004597 3.8e-24 115.5 78 74.4
Phvul.L009543 Phaseolus vulgaris HOM05D001013 ORTHO05D004597 3.8e-24 115.5 79 74.7
CARHR243170 Cardamine hirsuta HOM05D001013 ORTHO05D004597 5.0e-24 115.2 79 70.9
Os03g0429800 Oryza sativa ssp. japonica HOM05D001013 ORTHO05D004597 5.0e-24 115.2 78 74.4
Aa31LG2G15640 Aethionema arabicum HOM05D001013 ORTHO05D004597 8.5e-24 114.4 79 70.9
AL7G16310 Arabidopsis lyrata HOM05D001013 ORTHO05D004597 8.5e-24 114.4 79 70.9
BcaC04g24043 Brassica carinata HOM05D001013 ORTHO05D004597 8.5e-24 114.4 80 73.8
AL6G50970 Arabidopsis lyrata HOM05D001013 ORTHO05D004597 1.1e-23 114.0 80 72.5
BcaB01g02072 Brassica carinata HOM05D001013 ORTHO05D004597 3.2e-23 112.5 80 72.5
unitig_90.g27489 Utricularia gibba HOM05D001013 ORTHO05D004597 4.2e-23 112.1 95 61.1
A09p01610 Brassica napus HOM05D001013 ORTHO05D004597 1.2e-22 110.5 80 70.0
BraA09t35819Z Brassica rapa HOM05D001013 ORTHO05D004597 2.1e-22 109.8 80 70.0
arahy.Tifrunner.gnm1.ann1.V5338L Arachis hypogaea HOM05D001013 ORTHO05D004597 1.4e-21 107.1 76 71.1
Cre12.g545101 Chlamydomonas reinhardtii HOM05D001013 ORTHO05D004597 5.2e-21 105.1 79 58.2
TAR636G1523 Trochodendron aralioides HOM05D001013 ORTHO05D004597 3.7e-19 99.0 90 58.9
PRCOL_00001493 Prasinoderma coloniale HOM05D001013 ORTHO05D004597 1.8e-18 96.7 80 56.2
MCO15G310 Micromonas commoda HOM05D001013 ORTHO05D004597 1.1e-15 87.4 83 54.2
Thecc.09G231200 Theobroma cacao HOM05D018466 ORTHO05D004597 8.0e-14 81.3 64 64.1
A09p01670 Brassica napus HOM05D000125 ORTHO05D000120 1.4e-10 70.5 60 63.3
Carub.0007s3024 Capsella rubella HOM05D001487 ORTHO05D001365 4.1e-10 68.9 53 64.2
SEGI_10057 Sequoiadendron giganteum HOM05D000091 ORTHO05D002116 7.0e-10 68.2 75 48.0
SEGI_27673 Sequoiadendron giganteum HOM05D003387 ORTHO05D005400 1.0e-08 64.3 65 53.8
TAR362G0593 Trochodendron aralioides HOM05D001013 ORTHO05D414574 2.3e-08 63.2 49 61.2
SEGI_11647 Sequoiadendron giganteum HOM05D001499 ORTHO05D001560 3.9e-08 62.4 69 49.3
Cfa025145 Carpinus fangiana HOM05D001013 ORTHO05D004597 6.6e-08 61.6 86 43.0
BcaB01g02071 Brassica carinata HOM05D001013 ORTHO05D004597 2.5e-07 59.7 56 57.1
SEGI_34142 Sequoiadendron giganteum HOM05D000879 ORTHO05D008069 4.3e-07 58.9 58 58.6
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 2.8e-06 56.2 73 41.1
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.8e-06 56.2 46 58.7
PRCOL_00006722 Prasinoderma coloniale HOM05D001013 ORTHO05D004597 3.6e-06 55.8 65 46.2
SMO137G0288 Selaginella moellendorffii HOM05D001013 ORTHO05D001703 8.0e-06 54.7 56 44.6


User provided reference genes

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