Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15088 Sequoiadendron giganteum HOM05D006408 ORTHO05D008038 1.4e-196 689.5 353 100.0
Gohir.D02G078200 Gossypium hirsutum HOM05D006408 ORTHO05D008038 4.5e-83 312.4 220 64.1
Gorai.005G087700 Gossypium raimondii HOM05D006408 ORTHO05D008038 4.5e-83 312.4 220 64.1
Nitab4.5_0001168g0170 Nicotiana tabacum HOM05D006408 ORTHO05D008038 5.9e-83 312.0 285 56.1
Peaxi162Scf00066g00222 Petunia axillaris HOM05D006408 ORTHO05D008038 7.7e-83 311.6 251 59.8
QL09p032485 Quercus lobata HOM05D006408 ORTHO05D008038 2.2e-82 310.1 219 62.6
Thecc.08G133100 Theobroma cacao HOM05D006408 ORTHO05D008038 3.8e-82 309.3 220 63.6
FvH4_2g27850 Fragaria vesca HOM05D006408 ORTHO05D008038 6.5e-82 308.5 220 63.2
FAN24G2159 Fragaria x ananassa HOM05D006408 ORTHO05D008038 6.5e-82 308.5 220 63.2
FAN27G1901 Fragaria x ananassa HOM05D006408 ORTHO05D008038 6.5e-82 308.5 220 63.2
THA.LOC104814021 Tarenaya hassleriana HOM05D006408 ORTHO05D008038 1.1e-81 307.8 220 61.8
CDE06G0572 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 1.9e-81 307.0 225 64.0
CARHR021960 Cardamine hirsuta HOM05D006408 ORTHO05D008038 2.5e-81 306.6 220 62.3
FAN15G0171 Fragaria x ananassa HOM05D006408 ORTHO05D008038 2.5e-81 306.6 220 62.7
Prupe.1G489500 Prunus persica HOM05D006408 ORTHO05D008038 2.5e-81 306.6 220 62.3
Cc10_g13760 Coffea canephora HOM05D006408 ORTHO05D008038 4.2e-81 305.8 220 63.2
Cpa.g.sc26.317 Carica papaya HOM05D006408 ORTHO05D008038 5.5e-81 305.4 220 61.4
Cfa018129 Carpinus fangiana HOM05D006408 ORTHO05D008038 7.2e-81 305.1 220 61.8
FAN20G2488 Fragaria x ananassa HOM05D006408 ORTHO05D008038 7.2e-81 305.1 220 62.7
MD08G1159400 Malus domestica HOM05D006408 ORTHO05D008038 7.2e-81 305.1 220 62.3
CANSAT25G1301 Cannabis sativa HOM05D006408 ORTHO05D008038 9.4e-81 304.7 225 59.6
Carub.0001s2103 Capsella rubella HOM05D006408 ORTHO05D008038 9.4e-81 304.7 220 61.8
AL1G34740 Arabidopsis lyrata HOM05D006408 ORTHO05D008038 1.6e-80 303.9 220 61.8
DCAR_003587 Daucus carota HOM05D006408 ORTHO05D008038 1.6e-80 303.9 245 56.7
Sp1g19130 Schrenkiella parvula HOM05D006408 ORTHO05D008038 1.6e-80 303.9 220 61.8
MELO3C010512.2 Cucumis melo HOM05D006408 ORTHO05D008038 2.1e-80 303.5 271 54.6
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 2.1e-80 303.5 245 58.0
Migut.N03260 Erythranthe guttata HOM05D006408 ORTHO05D008038 3.6e-80 302.8 219 63.5
RcHm_v2.0_Chr6g0296711 Rosa chinensis HOM05D006408 ORTHO05D008038 3.6e-80 302.8 219 62.6
GSVIVG01008807001 Vitis vinifera HOM05D006408 ORTHO05D008038 3.6e-80 302.8 220 62.3
CAN.G288.5 Capsicum annuum HOM05D006408 ORTHO05D008038 6.1e-80 302.0 253 56.9
CsaV3_4G028270 Cucumis sativus L. HOM05D006408 ORTHO05D008038 6.1e-80 302.0 271 54.2
AT1G21600 Arabidopsis thaliana HOM05D006408 ORTHO05D008038 7.9e-80 301.6 220 60.9
PSO017G3385 Papaver somniferum HOM05D006408 ORTHO05D008038 7.9e-80 301.6 287 52.6
TAR628G0457 Trochodendron aralioides HOM05D006408 ORTHO05D008038 7.9e-80 301.6 285 52.3
HanXRQChr02g0045521 Helianthus annuus HOM05D006408 ORTHO05D008038 1.0e-79 301.2 248 56.0
Eucgr.A00239 Eucalyptus grandis HOM05D006408 ORTHO05D008038 1.4e-79 300.8 233 60.1
PGSC0003DMG400028061 Solanum tuberosum HOM05D006408 ORTHO05D008038 1.4e-79 300.8 219 62.6
CiPaw.16G022700 Carya illinoinensis HOM05D006408 ORTHO05D008038 1.8e-79 300.4 272 53.7
MBI03_g48069_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 1.8e-79 300.4 253 57.3
MSTRG.22398 Avicennia marina HOM05D006408 ORTHO05D008038 2.3e-79 300.1 234 60.3
ClCG11G015980 Citrullus lanatus HOM05D006408 ORTHO05D008038 2.3e-79 300.1 269 53.9
Oeu047179.2 Olea europaea HOM05D006408 ORTHO05D008038 2.3e-79 300.1 225 60.4
VMungo1309G0712 Vigna mungo HOM05D006408 ORTHO05D008038 2.3e-79 300.1 225 60.4
Actinidia15213 Actinidia chinensis HOM05D006408 ORTHO05D008038 3.0e-79 299.7 229 59.0
PSO170G2303 Papaver somniferum HOM05D006408 ORTHO05D008038 3.0e-79 299.7 286 52.8
BcaB07g32155 Brassica carinata HOM05D006408 ORTHO05D008038 5.1e-79 298.9 220 60.9
Solyc04g057870.3 Solanum lycopersicum HOM05D006408 ORTHO05D008038 5.1e-79 298.9 257 56.0
Aqoxy5G02393 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 6.7e-79 298.5 332 47.6
BcaC05g26077 Brassica carinata HOM05D006408 ORTHO05D008038 6.7e-79 298.5 220 60.9
A06p17690 Brassica napus HOM05D006408 ORTHO05D008038 6.7e-79 298.5 220 60.9
BraA06t24861Z Brassica rapa HOM05D006408 ORTHO05D008038 6.7e-79 298.5 220 60.9
C05p20590 Brassica napus HOM05D006408 ORTHO05D008038 1.5e-78 297.4 220 60.9
BolC5t30757H Brassica oleracea HOM05D006408 ORTHO05D008038 1.5e-78 297.4 220 60.9
CSS0036755 Camellia sinensis var. sinensis HOM05D006408 ORTHO05D008038 1.5e-78 297.4 225 60.4
Potri.002G078900 Populus trichocarpa HOM05D006408 ORTHO05D008038 1.5e-78 297.4 271 53.9
PGR083G0137 Punica granatum HOM05D006408 ORTHO05D008038 2.0e-78 297.0 249 56.6
Sopen04g025710 Solanum pennellii HOM05D006408 ORTHO05D008038 2.0e-78 297.0 257 55.6
unitig_52.g17545 Utricularia gibba HOM05D006408 ORTHO05D008038 2.6e-78 296.6 219 60.3
ATR0568G086 Amborella trichopoda HOM05D006408 ORTHO05D008038 3.3e-78 296.2 281 52.7
Glyma.04G087000 Glycine max HOM05D006408 ORTHO05D008038 5.7e-78 295.4 220 60.0
Lj4A682G50 Lonicera japonica HOM05D006408 ORTHO05D008038 5.7e-78 295.4 227 59.0
Phvul.009G129900 Phaseolus vulgaris HOM05D006408 ORTHO05D008038 7.4e-78 295.0 225 59.6
Ca_16607_v3 Cicer arietinum L. HOM05D006408 ORTHO05D008038 9.7e-78 294.7 225 60.0
Lj1g0002290 Lotus japonicus HOM05D006408 ORTHO05D008038 1.7e-77 293.9 220 60.9
Hma1.2p1_1121F.1_g259280 Hydrangea macrophylla HOM05D006408 ORTHO05D008038 2.2e-77 293.5 245 56.3
Lalb_Chr08g0241101 Lupinus albus HOM05D006408 ORTHO05D008038 2.2e-77 293.5 309 48.2
Nn1g08961 Nelumbo nucifera HOM05D006408 ORTHO05D008038 2.2e-77 293.5 322 48.8
Aa31LG7G5580 Aethionema arabicum HOM05D006408 ORTHO05D008038 3.7e-77 292.7 241 56.4
EL10Ac1g01346 Beta vulgaris HOM05D006408 ORTHO05D008038 3.7e-77 292.7 220 58.6
Sed0021255 Sechium edule HOM05D006408 ORTHO05D008038 4.8e-77 292.4 220 60.9
Lsat_1_v5_gn_1_7780 Lactuca sativa HOM05D006408 ORTHO05D008038 8.2e-77 291.6 213 61.0
Glyma.06G117500 Glycine max HOM05D006408 ORTHO05D008038 1.1e-76 291.2 225 58.7
CDE04G0676 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 1.4e-76 290.8 215 62.8
Medtr3g088605 Medicago truncatula HOM05D006408 ORTHO05D008038 1.8e-76 290.4 238 57.6
Manes.02G168400 Manihot esculenta HOM05D006408 ORTHO05D008038 2.4e-76 290.0 252 54.8
HPP92_009911 Vanilla planifolia HOM05D006408 ORTHO05D008038 9.1e-76 288.1 225 58.7
TPR.G28811 Trifolium pratense HOM05D006408 ORTHO05D008038 1.5e-75 287.3 238 57.6
Psat5g084760 Pisum sativum HOM05D006408 ORTHO05D008038 4.5e-75 285.8 246 56.1
Atru.chr13.1568 Acer truncatum HOM05D006408 ORTHO05D008038 1.3e-74 284.3 225 58.2
arahy.Tifrunner.gnm1.ann1.227FW7 Arachis hypogaea HOM05D006408 ORTHO05D008038 1.7e-74 283.9 220 60.5
arahy.Tifrunner.gnm1.ann1.8X384Y Arachis hypogaea HOM05D006408 ORTHO05D008038 1.7e-74 283.9 220 60.5
Ciclev10001886m.g Citrus clementina HOM05D006408 ORTHO05D008038 1.4e-73 280.8 247 54.3
Os11g0110100 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 1.4e-73 280.8 217 59.9
Os12g0110400 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 4.2e-73 279.3 233 56.7
Zm00001eb195160 Zea mays HOM05D006408 ORTHO05D008038 4.7e-72 275.8 217 58.5
Mapoly0008s0219 Marchantia polymorpha HOM05D006408 ORTHO05D008038 1.8e-71 273.9 246 54.1
Pp3c1_1000 Physcomitrium patens HOM05D006408 ORTHO05D008038 1.5e-70 270.8 275 48.4
A08p28910 Brassica napus HOM05D006408 ORTHO05D008038 3.3e-70 269.6 206 59.7
Gohir.A02G071000 Gossypium hirsutum HOM05D006408 ORTHO05D008038 1.4e-68 264.2 220 56.8
Hund17341 Selenicereus undatus HOM05D006408 ORTHO05D008038 1.8e-68 263.8 179 68.2
Ah.10g032560 Amaranthus hybridus HOM05D006408 ORTHO05D008038 1.8e-63 247.3 248 50.0
BolC8t49731H Brassica oleracea HOM05D006408 ORTHO05D008038 5.7e-62 242.3 338 41.4
SMO146G0302 Selaginella moellendorffii HOM05D006408 ORTHO05D008038 2.2e-61 240.4 208 54.3
SGA_v2.0_scaffold25G11139 Striga asiatica HOM05D006408 ORTHO05D008038 9.1e-60 235.0 254 48.4
Nitab4.5_0003978g0010 Nicotiana tabacum HOM05D006408 ORTHO05D008038 6.5e-58 228.8 160 66.9
Sc26g0002930 Simmondsia chinensis HOM05D006408 ORTHO05D008038 1.5e-57 227.6 154 66.9
Thhalv10007813m.g Eutrema salsugineum HOM05D006408 ORTHO05D008038 4.2e-57 226.1 151 66.9
C08p20930 Brassica napus HOM05D006408 ORTHO05D008038 1.5e-54 217.6 171 57.9
Rhsim06G0091400 Rhododendron simsii HOM05D006408 ORTHO05D008038 2.6e-54 216.9 402 34.3
vmacro20822 Vaccinium macrocarpon HOM05D006408 ORTHO05D008038 3.1e-52 209.9 167 58.1
Duzib093G1884 Durio zibethinus HOM05D006408 ORTHO05D008038 7.7e-51 205.3 220 47.3
AUR62007717 Chenopodium quinoa HOM05D006408 ORTHO05D008038 2.9e-50 203.4 220 46.8
AUR62013426 Chenopodium quinoa HOM05D006408 ORTHO05D008038 8.6e-50 201.8 220 46.4
CsaV3_5G019980 Cucumis sativus L. HOM05D006408 ORTHO05D008038 7.8e-43 178.7 189 47.6
BraA08t34821Z Brassica rapa HOM05D006408 ORTHO05D008038 1.7e-42 177.6 144 56.9
MBI03_g28486_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 5.6e-41 172.6 212 45.3
COL.COLO4_06961 Corchorus olitorius HOM05D006408 ORTHO05D008038 3.6e-40 169.9 112 67.0
SalBow2G2951 Salvia bowleyana HOM05D006408 ORTHO05D008038 4.4e-38 162.9 111 65.8
CsaV3_UNG224650 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.4e-36 157.9 182 46.2
CBR_g40143 Chara braunii HOM05D006408 ORTHO05D008038 7.3e-33 145.6 176 44.3
Sabra02G0061800 Salix brachista HOM05D006408 ORTHO05D008038 2.7e-27 127.1 96 59.4
Dinv14691 Davidia involucrata HOM05D006408 ORTHO05D008038 1.2e-24 118.2 83 61.4
MBI03_g39652_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 1.2e-24 118.2 155 42.6
Aqoxy219s001 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 2.3e-23 114.0 109 50.5
AagrBONN_evm.TU.Sc2ySwM_344.4901 Anthoceros agrestis HOM05D006408 ORTHO05D008038 1.0e-18 98.6 141 39.7
BolC5t30909H Brassica oleracea HOM05D006408 ORTHO05D008038 1.3e-18 98.2 67 64.2
CsaV3_5G018920 Cucumis sativus L. HOM05D006408 ORTHO05D008038 2.1e-16 90.9 111 43.2
Actinidia21278 Actinidia chinensis HOM05D006408 ORTHO05D008038 8.4e-13 79.0 108 38.9
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.5e-09 67.4 43 69.8


User provided reference genes

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