Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11035 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 5.1e-34 147.1 72 100.0
SEGI_11307 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 5.1e-34 147.1 72 100.0
Pp3c17_4860 Physcomitrium patens HOM05D000228 ORTHO05D001545 5.8e-30 133.7 72 86.1
Mapoly0051s0017 Marchantia polymorpha HOM05D000228 ORTHO05D001545 2.9e-29 131.3 72 83.3
AagrBONN_evm.TU.Sc2ySwM_362.2196 Anthoceros agrestis HOM05D000228 ORTHO05D001545 3.9e-26 120.9 71 77.5
TAR623G0006 Trochodendron aralioides HOM05D000228 ORTHO05D001545 3.9e-26 120.9 72 76.4
CDE02G3052 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 8.7e-26 119.8 72 76.4
PSO384G5084 Papaver somniferum HOM05D000228 ORTHO05D001545 2.5e-25 118.2 72 76.4
PSO699G0040 Papaver somniferum HOM05D000228 ORTHO05D001545 2.5e-25 118.2 72 76.4
PSO017G3640 Papaver somniferum HOM05D000228 ORTHO05D001545 3.3e-25 117.9 71 73.2
Actinidia03765 Actinidia chinensis HOM05D000228 ORTHO05D001545 4.8e-24 114.0 71 73.2
CSS0025979 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 6.2e-24 113.6 72 73.6
HPP92_005962 Vanilla planifolia HOM05D000228 ORTHO05D001545 1.1e-23 112.8 72 70.8
Migut.A00876 Erythranthe guttata HOM05D000228 ORTHO05D001545 1.4e-23 112.5 72 72.2
GSVIVG01025079001 Vitis vinifera HOM05D000228 ORTHO05D001545 1.4e-23 112.5 72 72.2
Zm00001eb078830 Zea mays HOM05D000228 ORTHO05D001545 1.4e-23 112.5 72 70.8
Migut.C00025 Erythranthe guttata HOM05D000228 ORTHO05D001545 1.8e-23 112.1 72 72.2
Os04g0492300 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D001545 1.8e-23 112.1 72 70.8
CBR_g21008 Chara braunii HOM05D000228 ORTHO05D001545 2.4e-23 111.7 72 76.4
Cc01_g11950 Coffea canephora HOM05D000228 ORTHO05D001545 5.3e-23 110.5 72 72.2
Dinv27602 Davidia involucrata HOM05D000228 ORTHO05D001545 5.3e-23 110.5 72 70.8
Nn2g12369 Nelumbo nucifera HOM05D000228 ORTHO05D001545 5.3e-23 110.5 72 70.8
Solyc11g072730.2 Solanum lycopersicum HOM05D000228 ORTHO05D001545 2.0e-22 108.6 70 72.9
Sopen11g030400 Solanum pennellii HOM05D000228 ORTHO05D001545 2.0e-22 108.6 70 72.9
MSTRG.17722 Avicennia marina HOM05D000228 ORTHO05D001545 2.6e-22 108.2 70 72.9
Lalb_Chr01g0003921 Lupinus albus HOM05D000228 ORTHO05D001545 2.6e-22 108.2 72 70.8
Potri.001G341900 Populus trichocarpa HOM05D000228 ORTHO05D001545 2.6e-22 108.2 72 70.8
CANSAT56G4454 Cannabis sativa HOM05D000228 ORTHO05D001545 3.4e-22 107.8 70 70.0
CAN.G1190.18 Capsicum annuum HOM05D000228 ORTHO05D001545 3.4e-22 107.8 72 73.6
CiPaw.14G074800 Carya illinoinensis HOM05D000228 ORTHO05D001545 3.4e-22 107.8 72 70.8
DCAR_018871 Daucus carota HOM05D000228 ORTHO05D001545 3.4e-22 107.8 72 72.2
Ah.04g153590 Amaranthus hybridus HOM05D000228 ORTHO05D001545 5.8e-22 107.1 72 63.9
Cpa.g.sc7.208 Carica papaya HOM05D000228 ORTHO05D001545 5.8e-22 107.1 72 68.1
CsaV3_1G012790 Cucumis sativus L. HOM05D000228 ORTHO05D001545 5.8e-22 107.1 72 68.1
AUR62006512 Chenopodium quinoa HOM05D000228 ORTHO05D001545 7.6e-22 106.7 72 66.7
Ciclev10027681m.g Citrus clementina HOM05D000228 ORTHO05D001545 7.6e-22 106.7 73 72.6
MELO3C026854.2 Cucumis melo HOM05D000228 ORTHO05D001545 7.6e-22 106.7 72 68.1
Gohir.A03G036100 Gossypium hirsutum HOM05D000228 ORTHO05D001545 7.6e-22 106.7 72 66.7
Gohir.D03G132200 Gossypium hirsutum HOM05D000228 ORTHO05D001545 7.6e-22 106.7 72 66.7
Gorai.003G139100 Gossypium raimondii HOM05D000228 ORTHO05D001545 7.6e-22 106.7 72 66.7
SGA_v2.0_scaffold110G31200 Striga asiatica HOM05D000228 ORTHO05D001545 1.3e-21 105.9 70 70.0
Lj3C239T4 Lonicera japonica HOM05D000228 ORTHO05D001545 1.7e-21 105.5 72 70.8
Aqoxy4G03122 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 2.2e-21 105.1 72 68.1
Aqoxy4G03124 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 2.2e-21 105.1 72 68.1
Thecc.03G012000 Theobroma cacao HOM05D000228 ORTHO05D001545 2.2e-21 105.1 72 65.3
TWI75G1460 Tripterygium wilfordii HOM05D000228 ORTHO05D001545 2.2e-21 105.1 72 65.3
Sc19g0005360 Simmondsia chinensis HOM05D000228 ORTHO05D001545 2.9e-21 104.8 72 72.2
CAN.G84.13 Capsicum annuum HOM05D000228 ORTHO05D001545 3.8e-21 104.4 72 72.2
Manes.17G000400 Manihot esculenta HOM05D000228 ORTHO05D001545 3.8e-21 104.4 72 68.1
Sed0007851 Sechium edule HOM05D000228 ORTHO05D001545 5.0e-21 104.0 72 65.3
CARHR273660 Cardamine hirsuta HOM05D000228 ORTHO05D001545 6.5e-21 103.6 70 64.3
AT5G60040 Arabidopsis thaliana HOM05D000228 ORTHO05D001545 8.4e-21 103.2 72 63.9
ATR0594G163 Amborella trichopoda HOM05D000228 ORTHO05D001545 1.1e-20 102.8 70 67.1
AL8G36630 Arabidopsis lyrata HOM05D000228 ORTHO05D001545 1.9e-20 102.1 72 63.9
Carub.0008s2074 Capsella rubella HOM05D000228 ORTHO05D001545 1.9e-20 102.1 72 63.9
Thhalv10012446m.g Eutrema salsugineum HOM05D000228 ORTHO05D001545 2.5e-20 101.7 72 62.5
MCO05G255 Micromonas commoda HOM05D000228 ORTHO05D001545 2.5e-20 101.7 63 71.4
Sp6g21700 Schrenkiella parvula HOM05D000228 ORTHO05D001545 2.5e-20 101.7 72 63.9
THA.LOC104810826 Tarenaya hassleriana HOM05D000228 ORTHO05D001545 3.2e-20 101.3 72 62.5
Cfa011405 Carpinus fangiana HOM05D000228 ORTHO05D001545 5.5e-20 100.5 72 65.3
Eucgr.J02108 Eucalyptus grandis HOM05D000228 ORTHO05D001545 5.5e-20 100.5 71 69.0
vmacro12980 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 7.1e-20 100.1 71 67.6
COL.COLO4_14804 Corchorus olitorius HOM05D000228 ORTHO05D001545 9.3e-20 99.8 70 64.3
Rhsim01G0223300 Rhododendron simsii HOM05D000228 ORTHO05D001545 2.7e-19 98.2 60 75.0
Oeu041542.1 Olea europaea HOM05D000228 ORTHO05D001545 3.5e-19 97.8 55 81.8
ClCG03G002130 Citrullus lanatus HOM05D000228 ORTHO05D001545 4.6e-19 97.4 68 69.1
HanXRQChr04g0106851 Helianthus annuus HOM05D000228 ORTHO05D001545 4.6e-19 97.4 72 65.3
BcaB05g22610 Brassica carinata HOM05D000228 ORTHO05D001545 7.9e-19 96.7 74 62.2
A02p06630 Brassica napus HOM05D000228 ORTHO05D001545 7.9e-19 96.7 74 62.2
BolC2t07289H Brassica oleracea HOM05D000228 ORTHO05D001545 7.9e-19 96.7 74 62.2
BraA02t05745Z Brassica rapa HOM05D000228 ORTHO05D001545 7.9e-19 96.7 74 62.2
CSS0035598 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 7.9e-19 96.7 57 78.9
PGSC0003DMG402025354 Solanum tuberosum HOM05D000228 ORTHO05D001545 7.9e-19 96.7 55 81.8
Aa31LG1G12200 Aethionema arabicum HOM05D000228 ORTHO05D001545 1.0e-18 96.3 72 61.1
Lj1g0011731 Lotus japonicus HOM05D000228 ORTHO05D001545 1.3e-18 95.9 72 65.3
Nitab4.5_0004839g0020 Nicotiana tabacum HOM05D000228 ORTHO05D001545 1.8e-18 95.5 54 83.3
Atru.chr3.3760 Acer truncatum HOM05D000228 ORTHO05D001545 2.3e-18 95.1 55 80.0
AUR62025018 Chenopodium quinoa HOM05D000228 ORTHO05D001545 2.3e-18 95.1 70 62.9
Nitab4.5_0001885g0030 Nicotiana tabacum HOM05D000228 ORTHO05D001545 3.9e-18 94.4 54 81.5
Peaxi162Scf00616g00511 Petunia axillaris HOM05D000228 ORTHO05D001545 3.9e-18 94.4 54 79.6
PGR119G1503 Punica granatum HOM05D000228 ORTHO05D001545 3.9e-18 94.4 71 63.4
ECA247G0560 Erigeron canadensis HOM05D000228 ORTHO05D001545 6.7e-18 93.6 67 65.7
QL06p007429 Quercus lobata HOM05D000228 ORTHO05D001545 8.7e-18 93.2 59 74.6
EL10Ac3g06609 Beta vulgaris HOM05D000228 ORTHO05D001545 1.1e-17 92.8 55 76.4
COL.COLO4_18403 Corchorus olitorius HOM05D000228 ORTHO05D001545 1.1e-17 92.8 54 77.8
Haze_23976 Corylus avellana HOM05D000228 ORTHO05D001545 1.1e-17 92.8 55 76.4
Nitab4.5_0001885g0040 Nicotiana tabacum HOM05D000228 ORTHO05D001545 2.5e-17 91.7 54 79.6
Cre03.g165750 Chlamydomonas reinhardtii HOM05D000228 ORTHO05D001545 3.3e-17 91.3 72 63.9
arahy.Tifrunner.gnm1.ann1.E1FMMY Arachis hypogaea HOM05D000228 ORTHO05D001545 5.7e-17 90.5 71 60.6
arahy.Tifrunner.gnm1.ann1.ZV3AQA Arachis hypogaea HOM05D000228 ORTHO05D001545 5.7e-17 90.5 71 60.6
Phvul.011G070100 Phaseolus vulgaris HOM05D000228 ORTHO05D001545 9.7e-17 89.7 72 62.5
Nitab4.5_0004015g0070 Nicotiana tabacum HOM05D000228 ORTHO05D001545 1.3e-16 89.4 50 84.0
AUR62035701 Chenopodium quinoa HOM05D000228 ORTHO05D001545 1.6e-16 89.0 72 59.7
FvH4_3g34290 Fragaria vesca HOM05D000228 ORTHO05D001545 1.6e-16 89.0 59 69.5
FAN11G3166 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.6e-16 89.0 59 69.5
FAN16G3688 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.6e-16 89.0 59 69.5
FAN21G2820 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.6e-16 89.0 59 69.5
Ca_19216_v3 Cicer arietinum L. HOM05D000228 ORTHO05D001545 2.8e-16 88.2 71 60.6
ECA233G1127 Erigeron canadensis HOM05D000228 ORTHO05D001545 2.8e-16 88.2 67 62.7
Glyma.11G147317 Glycine max HOM05D000228 ORTHO05D001545 2.8e-16 88.2 72 61.1
Duzib150G0751 Durio zibethinus HOM05D000228 ORTHO05D001545 3.7e-16 87.8 57 70.2
MD03G1106800 Malus domestica HOM05D000228 ORTHO05D001545 4.8e-16 87.4 85 52.9
Prupe.6G089600 Prunus persica HOM05D000228 ORTHO05D001545 6.3e-16 87.0 84 53.6
Aa31LG1G12170 Aethionema arabicum HOM05D000228 ORTHO05D001545 8.2e-16 86.7 64 62.5
Lsat_1_v5_gn_9_21100 Lactuca sativa HOM05D000228 ORTHO05D001545 8.2e-16 86.7 51 76.5
PRCOL_00001662 Prasinoderma coloniale HOM05D000228 ORTHO05D001545 1.1e-15 86.3 60 65.0
Sabra16G0221600 Salix brachista HOM05D000228 ORTHO05D001545 1.1e-15 86.3 54 75.9
HanXRQChr08g0230641 Helianthus annuus HOM05D000228 ORTHO05D001545 1.4e-15 85.9 72 59.7
RcHm_v2.0_Chr5g0061861 Rosa chinensis HOM05D000228 ORTHO05D001545 1.4e-15 85.9 56 71.4
Lsat_1_v5_gn_2_6980 Lactuca sativa HOM05D000228 ORTHO05D001545 1.8e-15 85.5 71 56.3
Medtr4g061700 Medicago truncatula HOM05D000228 ORTHO05D001545 1.8e-15 85.5 71 57.7
Medtr4g061800 Medicago truncatula HOM05D000228 ORTHO05D001545 2.4e-15 85.1 71 56.3
Atru.chr3.3762 Acer truncatum HOM05D000228 ORTHO05D001545 4.1e-15 84.3 65 61.5
TPR.G2993 Trifolium pratense HOM05D000228 ORTHO05D001545 5.3e-15 84.0 71 57.7
EL10Ac1g02243 Beta vulgaris HOM05D000228 ORTHO05D001545 9.0e-15 83.2 55 70.9
Psat7g221400 Pisum sativum HOM05D000228 ORTHO05D001545 1.5e-14 82.4 71 54.9
SHI43201 Sapria himalayana HOM05D000228 ORTHO05D001545 1.5e-14 82.4 52 71.2
Peaxi162Scf00616g00621 Petunia axillaris HOM05D000228 ORTHO05D001545 2.6e-14 81.6 54 66.7
arahy.Tifrunner.gnm1.ann1.NH5KQA Arachis hypogaea HOM05D000228 ORTHO05D001545 1.0e-13 79.7 54 66.7
FvH4_6g15630 Fragaria vesca HOM05D000228 ORTHO05D001545 5.0e-13 77.4 62 59.7
RcHm_v2.0_Chr3g0469301 Rosa chinensis HOM05D000228 ORTHO05D001545 5.0e-13 77.4 53 67.9
FAN14G3914 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.1e-12 76.3 62 58.1
MD09G1157000 Malus domestica HOM05D000228 ORTHO05D001545 1.4e-12 75.9 73 47.9
VMungo1127G0038 Vigna mungo HOM05D000228 ORTHO05D001545 1.4e-12 75.9 55 67.3
Cfa021868 Carpinus fangiana HOM05D000228 ORTHO05D001545 1.9e-12 75.5 52 65.4
FAN02G0259 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.4e-12 73.2 59 55.9
vmacro14494 Vaccinium macrocarpon HOM05D005596 ORTHO05D001545 1.6e-11 72.4 44 72.7
Haze_26119 Corylus avellana HOM05D000228 ORTHO05D001545 3.6e-11 71.2 65 53.8
Thecc.03G011900 Theobroma cacao HOM05D000228 ORTHO05D001545 7.9e-11 70.1 55 58.2
TPR.G8519 Trifolium pratense HOM05D000228 ORTHO05D001545 2.5e-09 65.1 66 48.5
VMungo1127G1152 Vigna mungo HOM05D005386 ORTHO05D006981 2.5e-09 65.1 59 55.9


User provided reference genes

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