Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 2.9e-84 315.1 149 100.0
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.1e-22 110.5 140 40.0
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 4.2e-22 108.6 100 55.0
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 2.7e-21 105.9 128 43.8
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 6.0e-21 104.8 100 52.0
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.0e-20 104.0 88 54.5
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.3e-20 103.6 98 48.0
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.7e-20 103.2 128 43.0
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.7e-20 103.2 88 55.7
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.7e-20 103.2 88 52.3
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.7e-20 103.2 88 52.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 3.9e-20 102.1 88 53.4
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 3.9e-20 102.1 88 54.5
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 5.1e-20 101.7 93 51.6
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 6.6e-20 101.3 93 54.8
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.1e-19 100.5 99 47.5
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 1.9e-19 99.8 88 50.0
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 1.9e-19 99.8 91 52.7
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.9e-19 99.8 93 49.5
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.9e-19 99.8 99 47.5
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.9e-19 99.8 88 53.4
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.9e-19 99.8 88 53.4
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 3.3e-19 99.0 95 47.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 5.6e-19 98.2 93 52.7
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 5.6e-19 98.2 99 48.5
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 7.3e-19 97.8 88 51.1
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 7.3e-19 97.8 102 48.0
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 7.3e-19 97.8 96 49.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 9.6e-19 97.4 100 49.0
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 9.6e-19 97.4 100 49.0
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 9.6e-19 97.4 96 49.0
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 9.6e-19 97.4 96 47.9
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.3e-18 97.1 97 45.4
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.3e-18 97.1 88 52.3
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.6e-18 96.7 91 50.5
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.6e-18 96.7 131 40.5
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.6e-18 96.7 95 46.3
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.6e-18 96.7 92 48.9
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.1e-18 96.3 95 51.6
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.1e-18 96.3 88 48.9
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 2.1e-18 96.3 90 51.1
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 2.1e-18 96.3 92 47.8
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.1e-18 96.3 88 50.0
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 2.8e-18 95.9 88 50.0
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.8e-18 95.9 75 58.7
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 2.8e-18 95.9 90 52.2
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.6e-18 95.5 91 47.3
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.6e-18 95.5 93 50.5
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 3.6e-18 95.5 93 49.5
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 3.6e-18 95.5 88 48.9
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 3.6e-18 95.5 90 51.1
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 4.8e-18 95.1 98 45.9
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 4.8e-18 95.1 90 52.2
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 8.1e-18 94.4 93 49.5
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 8.1e-18 94.4 88 51.1
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.1e-17 94.0 88 48.9
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 1.8e-17 93.2 88 51.1
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.8e-17 93.2 88 51.1
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.8e-17 93.2 88 50.0
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.8e-17 93.2 88 50.0
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.8e-17 93.2 104 47.1
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.8e-17 93.2 96 44.8
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.8e-17 93.2 128 39.8
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.8e-17 93.2 128 39.8
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.8e-17 93.2 88 46.6
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.8e-17 93.2 89 48.3
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 2.4e-17 92.8 106 48.1
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 2.4e-17 92.8 93 47.3
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.4e-17 92.8 88 46.6
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 2.4e-17 92.8 88 46.6
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.1e-17 92.4 88 47.7
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 3.1e-17 92.4 88 48.9
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 4.0e-17 92.0 88 48.9
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.0e-17 92.0 128 39.8
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 5.3e-17 91.7 133 39.1
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 5.3e-17 91.7 95 45.3
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.9e-17 91.3 74 55.4
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 9.0e-17 90.9 88 50.0
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.2e-16 90.5 88 48.9
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.2e-16 90.5 93 44.1
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.5e-16 90.1 91 46.2
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 2.6e-16 89.4 88 47.7
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 3.4e-16 89.0 95 44.2
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 9.9e-16 87.4 88 45.5
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 9.9e-16 87.4 81 51.9
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 9.9e-16 87.4 88 46.6
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.3e-15 87.0 75 54.7
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.3e-15 87.0 75 54.7
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.7e-15 86.7 79 51.9
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 2.9e-15 85.9 75 50.7
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 4.9e-15 85.1 95 43.2
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 2.4e-14 82.8 90 43.3
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 5.4e-14 81.6 75 50.7
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.2e-13 80.5 79 50.6
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.6e-13 80.1 126 33.3
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 2.7e-13 79.3 94 41.5
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 2.7e-13 79.3 75 49.3
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.7e-13 79.3 75 48.0
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.8e-12 76.6 80 42.5
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.3e-10 70.5 93 43.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.6e-10 70.1 78 39.7
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 1.6e-10 70.1 103 35.0
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.2e-08 63.9 103 33.0
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 2.9e-07 59.3 109 30.3
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 3.2e-06 55.8 47 51.1
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 9.3e-06 54.3 93 35.5
Pp3c19_13839 Physcomitrium patens HOM05D006635 ORTHO05D008047 9.3e-06 54.3 72 34.7


User provided reference genes

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