Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09852 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 4.2e-167 591.3 296 100.0
SEGI_02756 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 3.8e-75 285.8 184 82.1
SEGI_34102 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 5.0e-59 232.3 151 82.1
SEGI_28851 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 2.0e-39 167.2 120 75.8
QL11p008681 Quercus lobata HOM05D006401 ORTHO05D007864 3.1e-29 133.3 178 48.3
MBI13_g31574_MAGBIO Magnolia biondii HOM05D006401 ORTHO05D007864 7.0e-29 132.1 129 58.9
CsaV3_1G004580 Cucumis sativus L. HOM05D006401 ORTHO05D007864 1.6e-28 131.0 171 47.4
CiPaw.16G104000 Carya illinoinensis HOM05D006401 ORTHO05D007864 2.7e-28 130.2 160 51.2
Prupe.1G064000 Prunus persica HOM05D006401 ORTHO05D007864 3.5e-28 129.8 139 53.2
Aa31LG8G10590 Aethionema arabicum HOM05D006401 ORTHO05D007864 4.5e-28 129.4 150 50.7
Thecc.09G196700 Theobroma cacao HOM05D006401 ORTHO05D007864 4.5e-28 129.4 177 47.5
FAN22G1023 Fragaria x ananassa HOM05D006401 ORTHO05D007864 7.7e-28 128.6 146 52.7
CDE05G1304 Ceratophyllum demersum HOM05D006401 ORTHO05D007864 1.0e-27 128.3 129 57.4
COL.COLO4_23416 Corchorus olitorius HOM05D006401 ORTHO05D007864 1.0e-27 128.3 167 50.3
Sed0005150 Sechium edule HOM05D006401 ORTHO05D007864 1.0e-27 128.3 129 57.4
Gorai.012G097600 Gossypium raimondii HOM05D006401 ORTHO05D007864 1.3e-27 127.9 129 58.1
Hma1.2p1_0314F.1_g122060 Hydrangea macrophylla HOM05D006401 ORTHO05D007864 1.7e-27 127.5 129 58.9
Potri.018G147400 Populus trichocarpa HOM05D006401 ORTHO05D007864 2.9e-27 126.7 194 45.4
Gohir.A04G052200 Gossypium hirsutum HOM05D006401 ORTHO05D007864 3.8e-27 126.3 129 57.4
MD13G1232500 Malus domestica HOM05D006401 ORTHO05D007864 5.0e-27 125.9 129 58.1
CANSAT80G2545 Cannabis sativa HOM05D006401 ORTHO05D007864 6.5e-27 125.6 148 50.7
FAN17G0150 Fragaria x ananassa HOM05D006401 ORTHO05D007864 6.5e-27 125.6 194 43.8
RcHm_v2.0_Chr4g0397611 Rosa chinensis HOM05D006401 ORTHO05D007864 6.5e-27 125.6 148 52.0
FvH4_4g06050 Fragaria vesca HOM05D006401 ORTHO05D007864 8.5e-27 125.2 146 50.7
FAN12G0292 Fragaria x ananassa HOM05D006401 ORTHO05D007864 8.5e-27 125.2 146 50.7
Nn8g41133 Nelumbo nucifera HOM05D006401 ORTHO05D007864 8.5e-27 125.2 166 47.6
PSO170G1271 Papaver somniferum HOM05D006401 ORTHO05D007864 8.5e-27 125.2 131 54.2
Lj9A5T15 Lonicera japonica HOM05D006401 ORTHO05D007864 1.1e-26 124.8 130 56.9
Lju50A23T26 Lonicera japonica HOM05D006401 ORTHO05D007864 1.1e-26 124.8 130 56.9
TAR626G0078 Trochodendron aralioides HOM05D006401 ORTHO05D007864 1.1e-26 124.8 142 52.8
AUR62027987 Chenopodium quinoa HOM05D006401 ORTHO05D007864 1.5e-26 124.4 129 56.6
Ciclev10008288m.g Citrus clementina HOM05D006401 ORTHO05D007864 1.5e-26 124.4 136 55.9
SGA_v2.0_scaffold318G48475 Striga asiatica HOM05D006401 ORTHO05D007864 1.5e-26 124.4 184 45.7
Manes.02G221700 Manihot esculenta HOM05D006401 ORTHO05D007864 2.5e-26 123.6 183 44.8
Ah.11g043600 Amaranthus hybridus HOM05D006401 ORTHO05D007864 3.2e-26 123.2 150 49.3
A08p09710 Brassica napus HOM05D006401 ORTHO05D007864 3.2e-26 123.2 186 45.2
PSO063G4133 Papaver somniferum HOM05D006401 ORTHO05D007864 3.2e-26 123.2 131 53.4
AL7G44200 Arabidopsis lyrata HOM05D006401 ORTHO05D007864 4.2e-26 122.9 181 43.6
Actinidia02474 Actinidia chinensis HOM05D006401 ORTHO05D007864 5.5e-26 122.5 129 56.6
BcaC07g37665 Brassica carinata HOM05D006401 ORTHO05D007864 5.5e-26 122.5 165 47.3
Carub.0007s3123 Capsella rubella HOM05D006401 ORTHO05D007864 5.5e-26 122.5 156 48.1
Cpa.g.sc115.22 Carica papaya HOM05D006401 ORTHO05D007864 7.2e-26 122.1 168 46.4
AT5G35400 Arabidopsis thaliana HOM05D006401 ORTHO05D007864 9.4e-26 121.7 187 43.3
AUR62020726 Chenopodium quinoa HOM05D006401 ORTHO05D007864 9.4e-26 121.7 129 55.8
Cc00_g00110 Coffea canephora HOM05D006401 ORTHO05D007864 9.4e-26 121.7 129 58.1
Lj4g0001613 Lotus japonicus HOM05D006401 ORTHO05D007864 1.2e-25 121.3 125 56.0
Sc23g0004370 Simmondsia chinensis HOM05D006401 ORTHO05D007864 1.6e-25 120.9 129 54.3
ATR0626G158 Amborella trichopoda HOM05D006401 ORTHO05D007864 2.1e-25 120.6 158 46.8
CARHR217420 Cardamine hirsuta HOM05D006401 ORTHO05D007864 2.1e-25 120.6 156 48.7
Thhalv10003453m.g Eutrema salsugineum HOM05D006401 ORTHO05D007864 2.1e-25 120.6 133 53.4
HanXRQChr10g0309551 Helianthus annuus HOM05D006401 ORTHO05D007864 2.1e-25 120.6 163 47.2
Dinv12612 Davidia involucrata HOM05D006401 ORTHO05D007864 2.7e-25 120.2 129 54.3
Sopen07g005990 Solanum pennellii HOM05D006401 ORTHO05D007864 2.7e-25 120.2 152 48.7
Sp7g07040 Schrenkiella parvula HOM05D006401 ORTHO05D007864 4.7e-25 119.4 187 44.4
BcaB04g18045 Brassica carinata HOM05D006401 ORTHO05D007864 6.1e-25 119.0 184 42.9
Ca_17430_v3 Cicer arietinum L. HOM05D006401 ORTHO05D007864 6.1e-25 119.0 156 48.1
Ca_17439_v3 Cicer arietinum L. HOM05D006401 ORTHO05D007864 6.1e-25 119.0 156 48.1
THA.LOC104826573 Tarenaya hassleriana HOM05D006401 ORTHO05D007864 6.1e-25 119.0 129 53.5
GSVIVG01013042001 Vitis vinifera HOM05D006401 ORTHO05D007864 1.0e-24 118.2 129 54.3
EL10Ac2g03627 Beta vulgaris HOM05D006401 ORTHO05D007864 1.4e-24 117.9 193 42.0
Rhsim03G0113000 Rhododendron simsii HOM05D006401 ORTHO05D007864 1.8e-24 117.5 188 42.6
Hund19359 Selenicereus undatus HOM05D006401 ORTHO05D007864 1.8e-24 117.5 179 47.5
Medtr8g101250 Medicago truncatula HOM05D006401 ORTHO05D007864 3.0e-24 116.7 125 56.0
Nitab4.5_0008632g0020 Nicotiana tabacum HOM05D006401 ORTHO05D007864 5.2e-24 115.9 130 53.1
Zm00001eb274430 Zea mays HOM05D006401 ORTHO05D007864 5.2e-24 115.9 130 53.8
arahy.Tifrunner.gnm1.ann1.IH6H8X Arachis hypogaea HOM05D006401 ORTHO05D007864 6.8e-24 115.5 166 46.4
MSTRG.5961 Avicennia marina HOM05D006401 ORTHO05D007864 6.8e-24 115.5 141 51.8
Lsat_1_v5_gn_5_80461 Lactuca sativa HOM05D006401 ORTHO05D007864 6.8e-24 115.5 131 53.4
ECA236G1652 Erigeron canadensis HOM05D006401 ORTHO05D007864 1.2e-23 114.8 192 43.2
Lalb_Chr05g0223791 Lupinus albus HOM05D006401 ORTHO05D007864 1.2e-23 114.8 125 53.6
Aqoxy7G02629 Aquilegia oxysepala HOM05D006401 ORTHO05D007864 1.5e-23 114.4 188 42.0
Glyma.08G027300 Glycine max HOM05D006401 ORTHO05D007864 2.6e-23 113.6 125 51.2
BraA08t32967Z Brassica rapa HOM05D006401 ORTHO05D007864 3.4e-23 113.2 209 41.6
PGR044G1973 Punica granatum HOM05D006401 ORTHO05D007864 3.4e-23 113.2 129 52.7
VMungo0251G1477 Vigna mungo HOM05D006401 ORTHO05D007864 5.7e-23 112.5 125 52.0
arahy.Tifrunner.gnm1.ann1.Y2X24R Arachis hypogaea HOM05D006401 ORTHO05D007864 7.5e-23 112.1 166 45.8
BolC8t48034H Brassica oleracea HOM05D006401 ORTHO05D007864 7.5e-23 112.1 194 40.7
Migut.J00842 Erythranthe guttata HOM05D006401 ORTHO05D007864 9.8e-23 111.7 130 52.3
Nitab4.5_0000899g0070 Nicotiana tabacum HOM05D006401 ORTHO05D007864 9.8e-23 111.7 129 50.4
Phvul.002G302500 Phaseolus vulgaris HOM05D006401 ORTHO05D007864 9.8e-23 111.7 125 52.0
Glyma.05G220800 Glycine max HOM05D006401 ORTHO05D007864 1.4e-21 107.8 125 49.6
Sabra18G0128800 Salix brachista HOM05D006401 ORTHO05D007864 7.0e-21 105.5 166 45.2
MELO3C017384.2 Cucumis melo HOM05D006401 ORTHO05D007864 9.1e-21 105.1 132 50.8
Sabra18G0121600 Salix brachista HOM05D006401 ORTHO05D007864 3.5e-20 103.2 167 44.3
SHI03133 Sapria himalayana HOM05D006401 ORTHO05D007864 2.3e-19 100.5 127 49.6
CSS0033991 Camellia sinensis var. sinensis HOM05D006401 ORTHO05D007864 1.1e-18 98.2 178 41.6
SMO232G0120 Selaginella moellendorffii HOM05D006401 ORTHO05D007864 1.5e-18 97.8 124 50.8
FAN07G0669 Fragaria x ananassa HOM05D006401 ORTHO05D007864 9.5e-18 95.1 129 47.3
Duzib170G0999 Durio zibethinus HOM05D006401 ORTHO05D007864 4.7e-17 92.8 178 38.8
TPR.G32971 Trifolium pratense HOM05D006401 ORTHO05D007864 1.8e-16 90.9 102 53.9
ClCG06G014090 Citrullus lanatus HOM05D006401 ORTHO05D007864 2.0e-15 87.4 94 54.3
SalBow6G4903 Salvia bowleyana HOM05D006401 ORTHO05D007864 7.5e-15 85.5 140 43.6
CBR_g44387 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-13 80.9 161 37.3
SEGI_04184 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 5.0e-11 72.8 87 48.3
PGSC0003DMG402009562 Solanum tuberosum HOM05D006401 ORTHO05D007864 1.5e-10 71.2 49 77.6
TPR.G25454 Trifolium pratense HOM05D006401 ORTHO05D007864 1.6e-09 67.8 57 68.4
Gohir.D04G087600 Gossypium hirsutum HOM05D006401 ORTHO05D007864 4.7e-09 66.2 79 48.1
Solyc07g017250.4 Solanum lycopersicum HOM05D006401 ORTHO05D007864 2.6e-07 60.5 96 37.5
MCO14G313 Micromonas commoda HOM05D006401 ORTHO05D007864 5.7e-07 59.3 153 33.3
Aa31sc608G30 Aethionema arabicum HOM05D006401 ORTHO05D007864 2.2e-06 57.4 48 64.6
CDE05G1402 Ceratophyllum demersum HOM05D000163 ORTHO05D007864 2.9e-06 57.0 129 39.5
Psat7g020960 Pisum sativum HOM05D006401 ORTHO05D007864 4.9e-06 56.2 64 48.4


User provided reference genes

Program Settings