Gene: SEGI_02756
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_02756
- Transcript Identifier SEGI_02756.1
- Gene Type Coding gene
- Location chr4 : 179026644-179061984 : negative
Gene Family Information
- ID HOM05D006401
- #Genes/#Species 124/91
- Phylogenetic origin
- ID ORTHO05D007864
- #Genes/#Species 126/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_02756.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
| GO:0009451 | IEA | InterPro | RNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0009982 | IEA | InterPro | pseudouridine synthase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020095 | Pseudouridine synthase I, TruA, C-terminal |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR020097 | Pseudouridine synthase I, TruA, alpha/beta domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR001406 | Pseudouridine synthase I, TruA |
| IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
| Mapman id | Description |
|---|---|
| 16.5.3.1 | RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA) |