Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 6.1e-76 287.3 138 100.0
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 2.0e-58 229.2 124 91.1
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 5.7e-58 227.6 113 98.2
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 5.7e-58 227.6 113 98.2
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 9.7e-58 226.9 136 85.3
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.2e-45 184.9 113 77.9
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.2e-45 184.9 113 77.9
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.2e-44 183.3 113 77.0
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 1.2e-44 183.3 113 77.9
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.2e-44 183.3 113 77.0
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 2.1e-44 182.6 113 76.1
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 2.7e-44 182.2 113 77.0
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 3.6e-44 181.8 113 77.0
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 4.7e-44 181.4 110 77.3
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 4.7e-44 181.4 110 77.3
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 1.4e-43 179.9 113 76.1
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 1.8e-43 179.5 113 75.2
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.8e-43 179.5 113 75.2
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.8e-43 179.5 113 75.2
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 1.8e-43 179.5 113 77.0
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 2.3e-43 179.1 113 74.3
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 2.3e-43 179.1 113 75.2
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 3.0e-43 178.7 113 77.0
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 3.0e-43 178.7 112 75.9
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-43 178.3 113 74.3
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 5.2e-43 177.9 113 76.1
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 8.8e-43 177.2 113 76.1
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 1.2e-42 176.8 113 76.1
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 2.0e-42 176.0 111 73.9
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.6e-42 175.6 113 75.2
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 2.6e-42 175.6 113 75.2
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 3.4e-42 175.3 113 74.3
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 4.4e-42 174.9 113 73.5
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 5.7e-42 174.5 113 74.3
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 9.8e-42 173.7 113 74.3
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.3e-41 173.3 110 74.5
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-41 172.9 110 74.5
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-41 172.9 110 74.5
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-41 172.9 110 74.5
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-41 172.9 110 74.5
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 2.2e-41 172.6 113 72.6
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 2.2e-41 172.6 110 73.6
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 3.7e-41 171.8 113 74.3
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 8.3e-41 170.6 113 71.7
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 1.4e-40 169.9 113 73.5
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 1.4e-40 169.9 113 73.5
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 1.4e-40 169.9 113 73.5
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 1.4e-40 169.9 113 73.5
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 1.4e-40 169.9 113 73.5
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 1.4e-40 169.9 113 73.5
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-40 168.7 109 73.4
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 4.1e-40 168.3 113 72.6
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 5.4e-40 167.9 113 72.6
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 5.4e-40 167.9 113 72.6
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 9.1e-40 167.2 113 72.6
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 9.1e-40 167.2 113 72.6
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 9.1e-40 167.2 113 72.6
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 9.1e-40 167.2 113 72.6
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 9.1e-40 167.2 113 72.6
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.2e-39 166.8 112 72.3
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.2e-39 166.8 113 71.7
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.6e-39 166.4 110 72.7
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 2.7e-39 165.6 113 71.7
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.7e-38 162.9 109 71.6
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 5.0e-38 161.4 113 69.0
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 1.5e-37 159.8 113 69.9
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 5.5e-37 157.9 112 67.9
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-36 156.8 113 68.1
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 1.2e-36 156.8 96 75.0
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 8.0e-36 154.1 112 66.1
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 2.3e-35 152.5 97 75.3
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 2.3e-35 152.5 97 75.3
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.3e-35 152.5 96 75.0
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.0e-35 152.1 98 73.5
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 6.8e-35 151.0 97 70.1
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 6.8e-35 151.0 97 70.1
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 8.8e-35 150.6 98 72.4
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 8.8e-35 150.6 98 69.4
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 1.5e-34 149.8 94 75.5
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.6e-34 149.1 108 64.8
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 3.4e-34 148.7 96 72.9
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 4.4e-34 148.3 97 72.2
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 5.7e-34 147.9 90 75.6
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 1.3e-33 146.7 97 73.2
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 1.7e-33 146.4 112 60.7
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 4.9e-33 144.8 98 70.4
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 4.9e-33 144.8 94 72.3
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 6.3e-33 144.4 94 72.3
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 8.3e-33 144.1 95 70.5
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.3e-33 144.1 109 63.3
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.1e-32 143.7 96 71.9
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.8e-32 142.9 95 70.5
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 1.8e-32 142.9 89 73.0
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 2.4e-32 142.5 94 73.4
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 4.1e-32 141.7 93 72.0
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 1.6e-31 139.8 99 66.7
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.0e-31 139.4 95 69.5
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.0e-30 137.1 86 70.9
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.3e-30 136.0 87 74.7
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 6.6e-30 134.4 84 71.4
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.1e-29 133.7 89 71.9
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.5e-29 133.3 113 61.1
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.5e-29 133.3 94 67.0
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.5e-29 131.3 88 70.5
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.6e-28 128.6 76 73.7
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 6.1e-28 127.9 113 52.2
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.8e-27 126.3 86 69.8
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.0e-27 125.6 80 68.8
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 3.4e-26 122.1 63 90.5
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 9.8e-26 120.6 113 58.4
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.7e-25 119.8 85 67.1
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 2.9e-25 119.0 86 69.8
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 1.1e-24 117.1 87 70.1
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.4e-24 116.7 121 51.2
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 7.0e-24 114.4 69 73.9
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-23 113.2 70 70.0
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-23 113.2 70 70.0
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-23 113.2 70 70.0
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-23 113.2 70 70.0
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-23 113.2 70 70.0
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.9e-23 111.3 69 69.6
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.9e-23 111.3 69 69.6
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.9e-23 111.3 69 69.6
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.9e-23 111.3 69 69.6
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.9e-23 111.3 69 69.6
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 1.0e-22 110.5 90 57.8
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.9e-22 109.0 110 54.5
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 8.6e-22 107.5 81 64.2
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 1.9e-21 106.3 61 73.8
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 3.3e-21 105.5 63 71.4
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.6e-20 102.1 59 74.6
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 6.1e-20 101.3 117 49.6
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 1.4e-19 100.1 72 62.5
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 8.9e-19 97.4 113 46.9
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 1.2e-18 97.1 118 48.3
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-18 94.7 76 57.9
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 9.8e-18 94.0 96 51.0
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 2.9e-17 92.4 116 43.1
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.9e-17 92.4 53 88.7
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 8.3e-17 90.9 49 93.9
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 2.7e-15 85.9 61 68.9
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 2.7e-15 85.9 51 72.5
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 7.8e-15 84.3 64 70.3
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 1.0e-14 84.0 90 52.2
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 1.0e-14 84.0 63 66.7
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 6.6e-14 81.3 52 71.2
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 6.6e-14 81.3 110 45.5
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 1.1e-13 80.5 49 71.4
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 1.5e-13 80.1 59 71.2
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 1.5e-13 80.1 64 65.6
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 9.5e-13 77.4 49 79.6
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.6e-12 76.6 78 52.6
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 3.6e-12 75.5 55 70.9
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 6.2e-12 74.7 58 69.0
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.8e-11 71.2 53 67.9
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.8e-11 71.2 53 67.9
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.2e-10 70.5 102 41.2
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 2.0e-10 69.7 87 47.1
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 5.8e-10 68.2 54 61.1
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 9.8e-10 67.4 34 82.4
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 2.9e-09 65.9 67 59.7
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.4e-08 63.5 37 64.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.4e-08 63.5 80 46.2
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 1.9e-08 63.2 49 63.3
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 1.9e-08 63.2 56 51.8
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 3.2e-08 62.4 33 75.8
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 1.6e-07 60.1 36 75.0
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.7e-07 59.3 34 70.6


User provided reference genes

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