Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09069 Sequoiadendron giganteum HOM05D001156 ORTHO05D386629 1.6e-135 486.1 245 100.0
SEGI_23469 Sequoiadendron giganteum HOM05D001156 ORTHO05D001006 6.2e-31 138.7 90 84.4
ATR0068G065 Amborella trichopoda HOM05D001156 ORTHO05D001006 9.6e-16 88.2 75 64.0
QL10p015865 Quercus lobata HOM05D001156 ORTHO05D001006 5.8e-13 79.0 75 61.3
ATR0752G124 Amborella trichopoda HOM05D001156 ORTHO05D001006 7.6e-13 78.6 75 58.7
Gohir.A12G274300 Gossypium hirsutum HOM05D001156 ORTHO05D001006 9.9e-13 78.2 76 59.2
Peaxi162Scf00047g02451 Petunia axillaris HOM05D003092 ORTHO05D003977 2.9e-12 76.6 74 59.5
Duzib205G0148 Durio zibethinus HOM05D001156 ORTHO05D001006 4.9e-12 75.9 76 60.5
Cfa019137 Carpinus fangiana HOM05D001156 ORTHO05D001006 6.4e-12 75.5 76 59.2
Haze_07504 Corylus avellana HOM05D001156 ORTHO05D001006 6.4e-12 75.5 76 59.2
Gohir.D12G275000 Gossypium hirsutum HOM05D001156 ORTHO05D001006 8.4e-12 75.1 79 57.0
Gorai.008G295500 Gossypium raimondii HOM05D001156 ORTHO05D001006 8.4e-12 75.1 79 57.0
Hma1.2p1_0701F.1_g205880 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 8.4e-12 75.1 76 56.6
TWI14G1176 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 8.4e-12 75.1 76 59.2
Dinv20649 Davidia involucrata HOM05D001156 ORTHO05D001006 1.9e-11 73.9 76 57.9
Eucgr.D02092 Eucalyptus grandis HOM05D001156 ORTHO05D001006 1.9e-11 73.9 76 53.9
MD06G1173500 Malus domestica HOM05D001156 ORTHO05D001006 2.4e-11 73.6 75 56.0
PSO339G3237 Papaver somniferum HOM05D001156 ORTHO05D001006 3.2e-11 73.2 76 56.6
PSO384G4181 Papaver somniferum HOM05D001156 ORTHO05D001006 3.2e-11 73.2 76 56.6
TAR622G0652 Trochodendron aralioides HOM05D001156 ORTHO05D001006 3.2e-11 73.2 74 56.8
Manes.06G105200 Manihot esculenta HOM05D001156 ORTHO05D001006 4.2e-11 72.8 76 60.5
PSO675G7370 Papaver somniferum HOM05D001156 ORTHO05D001006 5.4e-11 72.4 76 55.3
VMungo0540G0215 Vigna mungo HOM05D001156 ORTHO05D001006 5.4e-11 72.4 74 56.8
Atru.chr9.2482 Acer truncatum HOM05D001156 ORTHO05D001006 7.1e-11 72.0 76 59.2
Lalb_Chr18g0058261 Lupinus albus HOM05D001156 ORTHO05D001006 7.1e-11 72.0 74 56.8
Nn4g22755 Nelumbo nucifera HOM05D001156 ORTHO05D001006 7.1e-11 72.0 76 55.3
Phvul.006G124100 Phaseolus vulgaris HOM05D001156 ORTHO05D001006 7.1e-11 72.0 74 56.8
PGR102G0269 Punica granatum HOM05D001156 ORTHO05D001006 7.1e-11 72.0 95 48.4
Thecc.03G013100 Theobroma cacao HOM05D001156 ORTHO05D001006 7.1e-11 72.0 76 59.2
Cpa.g.sc286.9 Carica papaya HOM05D001156 ORTHO05D001006 9.3e-11 71.6 74 58.1
Nitab4.5_0002015g0010 Nicotiana tabacum HOM05D001156 ORTHO05D001006 9.3e-11 71.6 76 59.2
Glyma.09G029000 Glycine max HOM05D001156 ORTHO05D001006 1.2e-10 71.2 74 55.4
Lj6g0014938 Lotus japonicus HOM05D001156 ORTHO05D001006 1.2e-10 71.2 74 54.1
arahy.Tifrunner.gnm1.ann1.7WX4FN Arachis hypogaea HOM05D001156 ORTHO05D001006 1.6e-10 70.9 74 54.1
BcaC05g30063 Brassica carinata HOM05D001156 ORTHO05D001006 1.6e-10 70.9 75 56.0
Hma1.2p1_0176F.1_g077370 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 1.6e-10 70.9 77 53.2
Medtr2g031760 Medicago truncatula HOM05D001156 ORTHO05D001006 1.6e-10 70.9 74 55.4
PSO541G0845 Papaver somniferum HOM05D001156 ORTHO05D001006 1.6e-10 70.9 76 56.6
Actinidia19323 Actinidia chinensis HOM05D001156 ORTHO05D000024 2.1e-10 70.5 76 55.3
Sp3g04990 Schrenkiella parvula HOM05D001156 ORTHO05D001006 2.1e-10 70.5 94 48.9
CiPaw.11G025700 Carya illinoinensis HOM05D001156 ORTHO05D001006 2.7e-10 70.1 75 54.7
MD14G1180000 Malus domestica HOM05D001156 ORTHO05D001006 2.7e-10 70.1 75 54.7
Potri.015G077200 Populus trichocarpa HOM05D001156 ORTHO05D001006 2.7e-10 70.1 77 57.1
CSS0016934 Camellia sinensis var. sinensis HOM05D001156 ORTHO05D001006 3.5e-10 69.7 74 54.1
Nitab4.5_0001875g0090 Nicotiana tabacum HOM05D001156 ORTHO05D001006 3.5e-10 69.7 76 59.2
THA.LOC104822304 Tarenaya hassleriana HOM05D001156 ORTHO05D001006 3.5e-10 69.7 74 56.8
Lju470C11T7 Lonicera japonica HOM05D001156 ORTHO05D001006 4.6e-10 69.3 74 52.7
Prupe.5G173000 Prunus persica HOM05D001156 ORTHO05D001006 4.6e-10 69.3 75 54.7
PGSC0003DMG400008867 Solanum tuberosum HOM05D001156 ORTHO05D001006 4.6e-10 69.3 76 59.2
A05p41960 Brassica napus HOM05D001156 ORTHO05D001006 6.0e-10 68.9 74 55.4
BraA05t22918Z Brassica rapa HOM05D001156 ORTHO05D001006 6.0e-10 68.9 74 55.4
Sopen09g004770 Solanum pennellii HOM05D001156 ORTHO05D001006 6.0e-10 68.9 76 57.9
C05p61210 Brassica napus HOM05D001156 ORTHO05D001006 7.8e-10 68.6 75 54.7
BolC5t34781H Brassica oleracea HOM05D001156 ORTHO05D001006 7.8e-10 68.6 75 54.7
CANSAT80G0830 Cannabis sativa HOM05D001156 ORTHO05D001006 7.8e-10 68.6 75 54.7
Manes.14G065500 Manihot esculenta HOM05D001156 ORTHO05D001006 7.8e-10 68.6 76 59.2
MSTRG.17770 Avicennia marina HOM05D001156 ORTHO05D001006 1.0e-09 68.2 76 51.3
HanXRQChr05g0156251 Helianthus annuus HOM05D001156 ORTHO05D001006 1.0e-09 68.2 75 52.0
EL10Ac5g10741 Beta vulgaris HOM05D001156 ORTHO05D001006 1.3e-09 67.8 136 34.6
FAN13G2117 Fragaria x ananassa HOM05D001156 ORTHO05D001006 1.3e-09 67.8 75 52.0
Rhsim08G0172700 Rhododendron simsii HOM05D001156 ORTHO05D000024 1.3e-09 67.8 76 51.3
Rhsim08G0172800 Rhododendron simsii HOM05D001156 ORTHO05D001006 1.3e-09 67.8 76 51.3
Solyc09g010030.3 Solanum lycopersicum HOM05D001156 ORTHO05D001006 1.3e-09 67.8 76 57.9
TAR371G0150 Trochodendron aralioides HOM05D001156 ORTHO05D001006 1.3e-09 67.8 76 53.9
Aqoxy2G02136 Aquilegia oxysepala HOM05D001156 ORTHO05D001006 1.7e-09 67.4 75 56.0
ClCG06G015740 Citrullus lanatus HOM05D001156 ORTHO05D001006 1.7e-09 67.4 76 56.6
Dinv02539 Davidia involucrata HOM05D002723 ORTHO05D003240 1.7e-09 67.4 76 53.9
RcHm_v2.0_Chr7g0193501 Rosa chinensis HOM05D001156 ORTHO05D001006 1.7e-09 67.4 75 52.0
SGA_v2.0_scaffold62G21596 Striga asiatica HOM05D001156 ORTHO05D001006 1.7e-09 67.4 73 53.4
TWI39G0852 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 1.7e-09 67.4 76 56.6
Cc00_g05000 Coffea canephora HOM05D001156 ORTHO05D001006 2.3e-09 67.0 76 52.6
MELO3C003920.2 Cucumis melo HOM05D001156 ORTHO05D001006 2.3e-09 67.0 76 57.9
CsaV3_3G028630 Cucumis sativus L. HOM05D001156 ORTHO05D001006 2.3e-09 67.0 76 57.9
FvH4_5g05340 Fragaria vesca HOM05D001156 ORTHO05D001006 2.3e-09 67.0 75 50.7
FAN18G2375 Fragaria x ananassa HOM05D001156 ORTHO05D001006 2.3e-09 67.0 75 50.7
MBI10_g06740_MAGBIO Magnolia biondii HOM05D001156 ORTHO05D001006 2.3e-09 67.0 76 52.6
AL3G16880 Arabidopsis lyrata HOM05D001156 ORTHO05D001006 3.0e-09 66.6 73 57.5
Glyma.15G134800 Glycine max HOM05D001156 ORTHO05D001006 3.0e-09 66.6 76 55.3
Peaxi162Scf00047g02423 Petunia axillaris HOM05D001156 ORTHO05D001006 3.0e-09 66.6 89 49.4
Sabra15G0101900 Salix brachista HOM05D001156 ORTHO05D001006 3.0e-09 66.6 75 57.3
vmacro19392 Vaccinium macrocarpon HOM05D001156 ORTHO05D001006 3.0e-09 66.6 76 50.0
Ah.02g110810 Amaranthus hybridus HOM05D001156 ORTHO05D001006 3.9e-09 66.2 74 51.4
AT3G06040 Arabidopsis thaliana HOM05D001156 ORTHO05D001006 3.9e-09 66.2 73 56.2
FAN08G0627 Fragaria x ananassa HOM05D001156 ORTHO05D001006 3.9e-09 66.2 75 50.7
Oeu018233.1 Olea europaea HOM05D001156 ORTHO05D001006 3.9e-09 66.2 76 50.0
FAN04G1980 Fragaria x ananassa HOM05D001156 ORTHO05D001006 5.1e-09 65.9 75 50.7
Psat1g164640 Pisum sativum HOM05D001156 ORTHO05D001006 5.1e-09 65.9 74 50.0
Ca_00920_v3 Cicer arietinum L. HOM05D001156 ORTHO05D001006 6.6e-09 65.5 74 51.4
Cc11_g12810 Coffea canephora HOM05D001156 ORTHO05D001006 6.6e-09 65.5 76 51.3
Sc12g0005310 Simmondsia chinensis HOM05D001156 ORTHO05D001006 6.6e-09 65.5 76 52.6
TPR.G8034 Trifolium pratense HOM05D001156 ORTHO05D001006 6.6e-09 65.5 74 50.0
Aa31LG5G16530 Aethionema arabicum HOM05D001156 ORTHO05D001006 8.7e-09 65.1 73 47.9
Carub.0003s0547 Capsella rubella HOM05D001156 ORTHO05D001006 8.7e-09 65.1 74 52.7
Os02g0198900 Oryza sativa ssp. japonica HOM05D001156 ORTHO05D001006 1.1e-08 64.7 112 41.1
Sed0004231 Sechium edule HOM05D001156 ORTHO05D001006 1.1e-08 64.7 76 55.3
THA.LOC104802756 Tarenaya hassleriana HOM05D001156 ORTHO05D001006 1.5e-08 64.3 74 54.1
COL.COLO4_30043 Corchorus olitorius HOM05D001156 ORTHO05D001006 1.9e-08 63.9 76 51.3
Thhalv10021590m.g Eutrema salsugineum HOM05D001156 ORTHO05D001006 1.9e-08 63.9 74 51.4
Migut.N01934 Erythranthe guttata HOM05D001156 ORTHO05D001006 2.5e-08 63.5 73 46.6
Lsat_1_v5_gn_5_14700 Lactuca sativa HOM05D001156 ORTHO05D001006 2.5e-08 63.5 75 50.7
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 3.3e-08 63.2 76 52.6
DCAR_026138 Daucus carota HOM05D001156 ORTHO05D001006 3.3e-08 63.2 74 54.1
Nitab4.5_0000073g0570 Nicotiana tabacum HOM05D001156 ORTHO05D001006 3.3e-08 63.2 76 51.3
Hma1.2p1_2409F.1_g321500 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 4.3e-08 62.8 76 50.0
ECA246G0236 Erigeron canadensis HOM05D001156 ORTHO05D001006 5.6e-08 62.4 75 48.0
AUR62008204 Chenopodium quinoa HOM05D001156 ORTHO05D001006 7.3e-08 62.0 74 47.3
AUR62030957 Chenopodium quinoa HOM05D001156 ORTHO05D001006 7.3e-08 62.0 74 47.3
Zm00001eb235930 Zea mays HOM05D001156 ORTHO05D001006 1.3e-07 61.2 111 40.5
unitig_26.g10136 Utricularia gibba HOM05D001156 ORTHO05D001006 1.6e-07 60.8 73 43.8
Cc00_g05020 Coffea canephora HOM05D001156 ORTHO05D001006 2.1e-07 60.5 76 48.7
CARHR080540 Cardamine hirsuta HOM05D001156 ORTHO05D001006 3.6e-07 59.7 74 50.0
SHI16975 Sapria himalayana HOM05D001156 ORTHO05D001006 1.1e-06 58.2 73 47.9
SalBow6G0603 Salvia bowleyana HOM05D001156 ORTHO05D001006 1.4e-06 57.8 76 46.1
Ciclev10012849m.g Citrus clementina HOM05D001156 ORTHO05D001006 2.4e-06 57.0 76 48.7
HanXRQChr07g0196421 Helianthus annuus HOM05D001156 ORTHO05D001006 2.4e-06 57.0 73 47.9
HPP92_008592 Vanilla planifolia HOM05D001156 ORTHO05D001006 2.4e-06 57.0 74 47.3
arahy.Tifrunner.gnm1.ann1.JE3SS2 Arachis hypogaea HOM05D001156 ORTHO05D001006 5.3e-06 55.8 57 54.4


User provided reference genes

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