Gene: AT3G06040

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06040
  • Transcript Identifier AT3G06040.1
  • Gene Type Coding gene
  • Location Chr3 : 1824516-1825076 : negative

Gene Family Information

  • ID HOM05D001156
  • #Genes/#Species 534/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06040.1
  • uniprot Q9M7T1

Descriptions

  • Description Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
  • Computational description Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8332 Blast hits to 8332 proteins in 2728 species: Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132; Plants - 253; Viruses - 0; Other Eukaryotes - 2152 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013823 Ribosomal protein L7/L12, C-terminal
IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR000206 Ribosomal protein L7/L12
Mapman id Description
17.7.1.1.8 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL7/L12