Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07593 Sequoiadendron giganteum HOM05D005275 ORTHO05D006435 1.6e-108 396.4 232 100.0
Hma1.2p1_1507F.1_g287690 Hydrangea macrophylla HOM05D005275 ORTHO05D006435 8.2e-25 118.2 101 61.4
ATR0564G295 Amborella trichopoda HOM05D005275 ORTHO05D006435 2.4e-24 116.7 117 57.3
vmacro06395 Vaccinium macrocarpon HOM05D005275 ORTHO05D006435 2.4e-24 116.7 104 56.7
Hma1.2p1_1507F.1_g287680 Hydrangea macrophylla HOM05D005275 ORTHO05D006435 3.1e-24 116.3 91 63.7
Lj8A623T20 Lonicera japonica HOM05D005275 ORTHO05D006435 9.0e-24 114.8 117 53.8
Lsat_1_v5_gn_7_91160 Lactuca sativa HOM05D005275 ORTHO05D006435 1.2e-23 114.4 91 64.8
HanXRQChr16g0505961 Helianthus annuus HOM05D005275 ORTHO05D006435 2.0e-23 113.6 91 63.7
Manes.01G140200 Manihot esculenta HOM05D005275 ORTHO05D006435 2.6e-23 113.2 98 57.1
ECA236G4645 Erigeron canadensis HOM05D005275 ORTHO05D006435 4.5e-23 112.5 91 63.7
EL10Ac3g05547 Beta vulgaris HOM05D005275 ORTHO05D006435 5.9e-23 112.1 117 53.0
CiPaw.06G045000 Carya illinoinensis HOM05D005275 ORTHO05D006435 5.9e-23 112.1 91 62.6
Haze_00229 Corylus avellana HOM05D005275 ORTHO05D006435 5.9e-23 112.1 91 62.6
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 7.6e-23 111.7 92 63.0
TAR374G1406 Trochodendron aralioides HOM05D005275 ORTHO05D006435 7.6e-23 111.7 117 53.8
unitig_62.g23847 Utricularia gibba HOM05D002066 ORTHO05D001617 7.6e-23 111.7 93 61.3
Cpa.g.sc69.87 Carica papaya HOM05D005275 ORTHO05D006435 1.0e-22 111.3 91 62.6
HanXRQChr04g0128021 Helianthus annuus HOM05D005275 ORTHO05D006435 1.0e-22 111.3 91 62.6
Nn8g39914 Nelumbo nucifera HOM05D005275 ORTHO05D006435 1.0e-22 111.3 112 55.4
CDE01G0034 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 1.3e-22 110.9 117 50.4
AUR62002807 Chenopodium quinoa HOM05D005275 ORTHO05D006435 1.7e-22 110.5 143 45.5
Hund20626 Selenicereus undatus HOM05D005275 ORTHO05D006435 1.7e-22 110.5 117 52.1
Cfa016214 Carpinus fangiana HOM05D005275 ORTHO05D006435 2.2e-22 110.2 91 61.5
Potri.012G017300 Populus trichocarpa HOM05D005275 ORTHO05D006435 2.2e-22 110.2 91 61.5
PGR042G0357 Punica granatum HOM05D005275 ORTHO05D006435 2.2e-22 110.2 91 62.6
QL09p007976 Quercus lobata HOM05D005275 ORTHO05D006435 2.2e-22 110.2 91 58.2
Actinidia08664 Actinidia chinensis HOM05D005275 ORTHO05D006435 2.9e-22 109.8 111 53.2
CDE02G4591 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 2.9e-22 109.8 117 52.1
Dinv21061 Davidia involucrata HOM05D005275 ORTHO05D006435 2.9e-22 109.8 106 55.7
AL8G27700 Arabidopsis lyrata HOM05D005275 ORTHO05D006435 3.8e-22 109.4 91 59.3
CARHR266090 Cardamine hirsuta HOM05D005275 ORTHO05D006435 3.8e-22 109.4 91 60.4
TWI39G0072 Tripterygium wilfordii HOM05D005275 ORTHO05D006435 3.8e-22 109.4 91 60.4
Lj3g0024506 Lotus japonicus HOM05D005275 ORTHO05D006435 5.0e-22 109.0 93 61.3
MSTRG.48 Avicennia marina HOM05D005275 ORTHO05D006435 6.5e-22 108.6 112 52.7
CSS0019342 Camellia sinensis var. sinensis HOM05D005275 ORTHO05D006435 6.5e-22 108.6 91 60.4
Carub.0008s1327 Capsella rubella HOM05D005275 ORTHO05D006435 6.5e-22 108.6 91 58.2
MBI14_g34252_MAGBIO Magnolia biondii HOM05D005275 ORTHO05D006435 6.5e-22 108.6 114 55.3
Potri.012G121228 Populus trichocarpa HOM05D005275 ORTHO05D006435 6.5e-22 108.6 91 60.4
Aa31LG3G9400 Aethionema arabicum HOM05D005275 ORTHO05D006435 8.5e-22 108.2 91 61.5
Cc01_g04130 Coffea canephora HOM05D005275 ORTHO05D006435 1.1e-21 107.8 135 47.4
Oeu060995.2 Olea europaea HOM05D005275 ORTHO05D006435 1.4e-21 107.5 95 58.9
Atru.chr1.1611 Acer truncatum HOM05D005275 ORTHO05D006435 1.9e-21 107.1 113 52.2
AUR62014115 Chenopodium quinoa HOM05D005275 ORTHO05D006435 1.9e-21 107.1 89 61.8
CsaV3_3G019750 Cucumis sativus L. HOM05D005275 ORTHO05D006435 1.9e-21 107.1 91 62.6
Duzib114G0832 Durio zibethinus HOM05D005275 ORTHO05D006435 1.9e-21 107.1 91 61.5
Migut.F01020 Erythranthe guttata HOM05D005275 ORTHO05D006435 1.9e-21 107.1 91 61.5
Eucgr.H01489 Eucalyptus grandis HOM05D005275 ORTHO05D006435 1.9e-21 107.1 91 61.5
Glyma.06G288700 Glycine max HOM05D005275 ORTHO05D006435 1.9e-21 107.1 94 59.6
SGA_v2.0_scaffold55G19785 Striga asiatica HOM05D005275 ORTHO05D006435 1.9e-21 107.1 115 49.6
AT5G53070 Arabidopsis thaliana HOM05D005275 ORTHO05D006435 2.5e-21 106.7 91 58.2
CANSAT21G1202 Cannabis sativa HOM05D005275 ORTHO05D006435 2.5e-21 106.7 141 46.8
Glyma.16G061500 Glycine max HOM05D005275 ORTHO05D006435 3.2e-21 106.3 128 47.7
Peaxi162Scf00581g00021 Petunia axillaris HOM05D005275 ORTHO05D006435 3.2e-21 106.3 104 52.9
ClCG05G009030 Citrullus lanatus HOM05D005275 ORTHO05D006435 4.2e-21 105.9 167 41.3
Ciclev10022175m.g Citrus clementina HOM05D005275 ORTHO05D006435 4.2e-21 105.9 91 59.3
Gohir.A04G061600 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.A08G051700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.A10G000100 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.A10G201500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.A11G223000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.A12G028500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.A12G115900 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.D01G152400 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Gohir.D05G289000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.2e-21 105.9 112 55.4
Sed0020778 Sechium edule HOM05D005275 ORTHO05D006435 4.2e-21 105.9 91 61.5
HPP92_008880 Vanilla planifolia HOM05D005275 ORTHO05D006435 4.2e-21 105.9 121 52.1
GSVIVG01038570001 Vitis vinifera HOM05D005275 ORTHO05D006435 4.2e-21 105.9 86 62.8
FAN01G0712 Fragaria x ananassa HOM05D000442 ORTHO05D007032 5.5e-21 105.5 139 46.8
Glyma.19G085300 Glycine max HOM05D005275 ORTHO05D006435 5.5e-21 105.5 94 58.5
Gohir.A05G287800 Gossypium hirsutum HOM05D005275 ORTHO05D006435 5.5e-21 105.5 91 62.6
Gorai.009G304100 Gossypium raimondii HOM05D005275 ORTHO05D006435 5.5e-21 105.5 91 62.6
PSO675G7727 Papaver somniferum HOM05D005275 ORTHO05D006435 5.5e-21 105.5 91 57.1
VMungo1383G0294 Vigna mungo HOM05D005275 ORTHO05D006435 5.5e-21 105.5 94 57.4
Lalb_Chr22g0360521 Lupinus albus HOM05D005275 ORTHO05D006435 7.2e-21 105.1 127 48.8
Peaxi162Scf00251g01010 Petunia axillaris HOM05D005275 ORTHO05D006435 7.2e-21 105.1 139 44.6
Aqoxy7G03390 Aquilegia oxysepala HOM05D005275 ORTHO05D006435 9.4e-21 104.8 91 59.3
Ca_10483_v3 Cicer arietinum L. HOM05D005275 ORTHO05D006435 9.4e-21 104.8 93 59.1
Sc02g0003260 Simmondsia chinensis HOM05D005275 ORTHO05D006435 9.4e-21 104.8 96 54.2
Thecc.10G105800 Theobroma cacao HOM05D005275 ORTHO05D006435 9.4e-21 104.8 91 59.3
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 1.2e-20 104.4 128 48.4
Sed0013694 Sechium edule HOM05D005275 ORTHO05D006435 1.2e-20 104.4 111 52.3
DCAR_008951 Daucus carota HOM05D005275 ORTHO05D006435 1.6e-20 104.0 117 49.6
Gohir.D05G384500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.6e-20 104.0 112 54.5
Nitab4.5_0004499g0010 Nicotiana tabacum HOM05D005275 ORTHO05D006435 1.6e-20 104.0 104 51.0
PSO421G0063 Papaver somniferum HOM05D005275 ORTHO05D006435 2.1e-20 103.6 91 56.0
Phvul.008G150700 Phaseolus vulgaris HOM05D005275 ORTHO05D006435 2.1e-20 103.6 94 57.4
Sp6g15240 Schrenkiella parvula HOM05D005275 ORTHO05D006435 2.1e-20 103.6 91 59.3
THA.LOC104811989 Tarenaya hassleriana HOM05D005275 ORTHO05D006435 2.1e-20 103.6 91 58.2
TPR.G34143 Trifolium pratense HOM05D005275 ORTHO05D006435 2.1e-20 103.6 93 59.1
FAN10G2096 Fragaria x ananassa HOM05D000442 ORTHO05D007032 3.6e-20 102.8 128 50.0
Gohir.A07G020100 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-20 102.8 112 53.6
Psat7g227360 Pisum sativum HOM05D005275 ORTHO05D006435 3.6e-20 102.8 94 60.6
Solyc05g032880.3 Solanum lycopersicum HOM05D005275 ORTHO05D006435 3.6e-20 102.8 121 47.1
Sopen05g023270 Solanum pennellii HOM05D005275 ORTHO05D006435 3.6e-20 102.8 121 47.1
RcHm_v2.0_Chr1g0381511 Rosa chinensis HOM05D005275 ORTHO05D006435 4.6e-20 102.4 93 60.2
FvH4_7g32000 Fragaria vesca HOM05D005275 ORTHO05D006435 6.1e-20 102.1 93 60.2
Lj1C1021T21 Lonicera japonica HOM05D005275 ORTHO05D006435 6.1e-20 102.1 102 55.9
arahy.Tifrunner.gnm1.ann1.5IWG5U Arachis hypogaea HOM05D005275 ORTHO05D006435 7.9e-20 101.7 94 56.4
arahy.Tifrunner.gnm1.ann1.T9K8GJ Arachis hypogaea HOM05D005275 ORTHO05D006435 7.9e-20 101.7 94 56.4
Gohir.D09G028700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 7.9e-20 101.7 112 53.6
Nitab4.5_0000006g0650 Nicotiana tabacum HOM05D005275 ORTHO05D006435 7.9e-20 101.7 136 44.1
PGSC0003DMG400005324 Solanum tuberosum HOM05D005275 ORTHO05D006435 7.9e-20 101.7 121 45.5
COL.COLO4_38546 Corchorus olitorius HOM05D005275 ORTHO05D006435 1.0e-19 101.3 91 58.2
FAN10G0352 Fragaria x ananassa HOM05D005275 ORTHO05D006435 1.0e-19 101.3 93 60.2
Thhalv10014627m.g Eutrema salsugineum HOM05D005275 ORTHO05D006435 1.8e-19 100.5 91 57.1
Actinidia34231 Actinidia chinensis HOM05D005275 ORTHO05D006435 2.3e-19 100.1 93 55.9
BcaB05g22006 Brassica carinata HOM05D000442 ORTHO05D007032 2.3e-19 100.1 91 57.1
BcaC03g14459 Brassica carinata HOM05D005275 ORTHO05D006435 2.3e-19 100.1 91 57.1
A02p11320 Brassica napus HOM05D005275 ORTHO05D006435 2.3e-19 100.1 91 57.1
C02p18700 Brassica napus HOM05D005275 ORTHO05D006435 2.3e-19 100.1 91 57.1
BolC2t08015H Brassica oleracea HOM05D005275 ORTHO05D006435 2.3e-19 100.1 91 57.1
BraA02t06194Z Brassica rapa HOM05D005275 ORTHO05D006435 2.3e-19 100.1 91 57.1
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 3.9e-19 99.4 94 56.4
Medtr5g038540 Medicago truncatula HOM05D005275 ORTHO05D006435 5.1e-19 99.0 93 58.1
Ah.13g074120 Amaranthus hybridus HOM05D000770 ORTHO05D000586 6.7e-19 98.6 155 40.6
BcaB08g35669 Brassica carinata HOM05D005275 ORTHO05D006435 6.7e-19 98.6 91 56.0
BcaC04g20510 Brassica carinata HOM05D005275 ORTHO05D006435 6.7e-19 98.6 91 56.0
A10p10560 Brassica napus HOM05D005275 ORTHO05D006435 6.7e-19 98.6 91 56.0
C09p42780 Brassica napus HOM05D005275 ORTHO05D006435 6.7e-19 98.6 91 56.0
BolC9t57154H Brassica oleracea HOM05D005275 ORTHO05D006435 6.7e-19 98.6 91 56.0
BraA10t43140Z Brassica rapa HOM05D005275 ORTHO05D006435 6.7e-19 98.6 91 56.0
Medtr1g067700 Medicago truncatula HOM05D005275 ORTHO05D006435 8.8e-19 98.2 84 61.9
arahy.Tifrunner.gnm1.ann1.AF7P3K Arachis hypogaea HOM05D005275 ORTHO05D006435 1.5e-18 97.4 94 53.2
Rhsim03G0210600 Rhododendron simsii HOM05D005275 ORTHO05D006435 1.9e-18 97.1 185 36.2
Sabra12G0015200 Salix brachista HOM05D005275 ORTHO05D007032 2.2e-17 93.6 120 45.8
Zm00001eb199670 Zea mays HOM05D005275 ORTHO05D006435 2.2e-17 93.6 118 46.6
SHI02356 Sapria himalayana HOM05D005275 ORTHO05D006435 4.8e-17 92.4 163 36.8
Prupe.2G313400 Prunus persica HOM05D005275 ORTHO05D006435 1.4e-16 90.9 93 53.8
MD07G1293600 Malus domestica HOM05D005275 ORTHO05D006435 5.3e-16 89.0 94 54.3
Sc20g0002940 Simmondsia chinensis HOM05D005275 ORTHO05D006435 9.1e-16 88.2 113 44.2
Ciclev10023889m.g Citrus clementina HOM05D005275 ORTHO05D006435 2.6e-15 86.7 92 52.2
Os05g0528900 Oryza sativa ssp. japonica HOM05D005275 ORTHO05D006435 4.5e-15 85.9 133 42.9
Duzib128G1952 Durio zibethinus HOM05D005275 ORTHO05D006435 2.9e-14 83.2 142 43.0
Ciclev10024016m.g Citrus clementina HOM05D005275 ORTHO05D006435 5.0e-14 82.4 54 68.5
arahy.Tifrunner.gnm1.ann1.G3VF9V Arachis hypogaea HOM05D005275 ORTHO05D006435 9.4e-13 78.2 49 65.3
Mapoly0074s0056 Marchantia polymorpha HOM05D005275 ORTHO05D006435 5.1e-11 72.4 97 43.3
Pp3c9_14000 Physcomitrium patens HOM05D005275 ORTHO05D006435 1.5e-10 70.9 99 39.4
Sc21g0003940 Simmondsia chinensis HOM05D007402 ORTHO05D003673 3.3e-10 69.7 54 61.1
CBR_g30099 Chara braunii HOM05D005275 ORTHO05D006435 3.1e-08 63.2 91 40.7
AagrBONN_evm.TU.Sc2ySwM_228.762 Anthoceros agrestis HOM05D005275 ORTHO05D006435 1.5e-07 60.8 122 32.0
Lsat_1_v5_gn_9_70281 Lactuca sativa HOM05D005275 ORTHO05D006435 4.5e-07 59.3 95 38.9
SMO334G0054 Selaginella moellendorffii HOM05D005275 ORTHO05D006435 7.7e-07 58.5 106 32.1


User provided reference genes

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