Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04190 Sequoiadendron giganteum HOM05D002690 ORTHO05D005709 7.0e-102 374.0 197 100.0
SEGI_22079 Sequoiadendron giganteum HOM05D002690 ORTHO05D005709 5.9e-24 115.2 123 48.8
Actinidia31389 Actinidia chinensis HOM05D001466 ORTHO05D005709 5.0e-23 112.1 118 48.3
Migut.H01337 Erythranthe guttata HOM05D002690 ORTHO05D005709 8.5e-23 111.3 121 51.2
Gohir.A12G045500 Gossypium hirsutum HOM05D002690 ORTHO05D005709 1.4e-22 110.5 127 46.5
Sopen02g019330 Solanum pennellii HOM05D002690 ORTHO05D005709 2.5e-22 109.8 121 47.9
DCAR_007847 Daucus carota HOM05D002690 ORTHO05D005709 3.2e-22 109.4 122 49.2
Dinv15926 Davidia involucrata HOM05D002690 ORTHO05D005709 3.2e-22 109.4 118 46.6
Lj2C328G3 Lonicera japonica HOM05D002690 ORTHO05D005709 5.5e-22 108.6 121 53.7
Gohir.D12G044500 Gossypium hirsutum HOM05D002690 ORTHO05D005709 7.2e-22 108.2 127 45.7
Gorai.008G046800 Gossypium raimondii HOM05D002690 ORTHO05D005709 7.2e-22 108.2 127 45.7
Manes.14G122500 Manihot esculenta HOM05D002690 ORTHO05D005709 7.2e-22 108.2 122 57.4
Ciclev10014454m.g Citrus clementina HOM05D002690 ORTHO05D005709 9.4e-22 107.8 123 52.8
PGSC0003DMG400021104 Solanum tuberosum HOM05D002690 ORTHO05D005709 9.4e-22 107.8 121 47.9
Oeu060303.1 Olea europaea HOM05D002690 ORTHO05D005709 1.6e-21 107.1 121 47.1
DCAR_003862 Daucus carota HOM05D002690 ORTHO05D005709 2.1e-21 106.7 120 48.3
TAR627G0656 Trochodendron aralioides HOM05D002690 ORTHO05D005709 6.1e-21 105.1 121 45.5
Lsat_1_v5_gn_7_29481 Lactuca sativa HOM05D002690 ORTHO05D005709 7.9e-21 104.8 124 46.0
Nn3g20245 Nelumbo nucifera HOM05D002690 ORTHO05D005709 7.9e-21 104.8 118 46.6
PSO541G0016 Papaver somniferum HOM05D002690 ORTHO05D005709 7.9e-21 104.8 118 44.9
ATR0165G057 Amborella trichopoda HOM05D002690 ORTHO05D005709 1.0e-20 104.4 118 45.8
Mapoly0056s0030 Marchantia polymorpha HOM05D002690 ORTHO05D005709 1.0e-20 104.4 118 50.8
Oeu058474.2 Olea europaea HOM05D002690 ORTHO05D005709 1.0e-20 104.4 118 44.9
Sed0027591 Sechium edule HOM05D002690 ORTHO05D005709 1.0e-20 104.4 118 46.6
MSTRG.16286 Avicennia marina HOM05D002690 ORTHO05D005709 1.4e-20 104.0 121 49.6
CiPaw.09G115900 Carya illinoinensis HOM05D002690 ORTHO05D005709 1.4e-20 104.0 122 42.6
unitig_61.g26082 Utricularia gibba HOM05D002690 ORTHO05D005709 1.4e-20 104.0 132 42.4
Duzib132G0834 Durio zibethinus HOM05D002690 ORTHO05D005709 1.8e-20 103.6 123 51.2
Migut.M01886 Erythranthe guttata HOM05D002690 ORTHO05D005709 1.8e-20 103.6 122 43.4
Medtr2g029540 Medicago truncatula HOM05D002690 ORTHO05D005709 2.3e-20 103.2 118 44.1
AagrBONN_evm.TU.Sc2ySwM_228.4357 Anthoceros agrestis HOM05D002690 ORTHO05D005709 3.0e-20 102.8 122 45.1
Potri.011G089901 Populus trichocarpa HOM05D002690 ORTHO05D005709 3.0e-20 102.8 123 48.8
Solyc02g021760.3 Solanum lycopersicum HOM05D002690 ORTHO05D005709 3.0e-20 102.8 129 44.2
Sopen02g006300 Solanum pennellii HOM05D002690 ORTHO05D005709 3.0e-20 102.8 129 44.2
PSO675G8993 Papaver somniferum HOM05D002690 ORTHO05D005709 3.9e-20 102.4 119 46.2
Solyc02g070240.3 Solanum lycopersicum HOM05D002690 ORTHO05D005709 3.9e-20 102.4 118 46.6
ClCG08G001630 Citrullus lanatus HOM05D002690 ORTHO05D005709 5.1e-20 102.1 123 47.2
COL.COLO4_17684 Corchorus olitorius HOM05D002690 ORTHO05D005709 5.1e-20 102.1 123 56.1
AagrBONN_evm.TU.Sc2ySwM_362.1691 Anthoceros agrestis HOM05D002690 ORTHO05D005709 6.7e-20 101.7 118 44.1
Pp3c20_9290 Physcomitrium patens HOM05D002690 ORTHO05D005709 6.7e-20 101.7 124 43.5
Thecc.02G012500 Theobroma cacao HOM05D002690 ORTHO05D005709 6.7e-20 101.7 121 55.4
CDE12G0823 Ceratophyllum demersum HOM05D002690 ORTHO05D005709 1.1e-19 100.9 119 45.4
CsaV3_5G039520 Cucumis sativus L. HOM05D002690 ORTHO05D005709 1.1e-19 100.9 126 43.7
Manes.06G055600 Manihot esculenta HOM05D002690 ORTHO05D005709 1.1e-19 100.9 118 50.0
Nitab4.5_0011416g0020 Nicotiana tabacum HOM05D002690 ORTHO05D005709 1.1e-19 100.9 122 46.7
Hund26562 Selenicereus undatus HOM05D002690 ORTHO05D005709 1.1e-19 100.9 123 42.3
HPP92_016574 Vanilla planifolia HOM05D002690 ORTHO05D005709 1.1e-19 100.9 123 45.5
Atru.chr10.891 Acer truncatum HOM05D002690 ORTHO05D005709 1.5e-19 100.5 124 46.0
Cpa.g.sc17.104 Carica papaya HOM05D002690 ORTHO05D005709 1.5e-19 100.5 121 51.2
ClCG03G006290 Citrullus lanatus HOM05D002690 ORTHO05D005709 1.5e-19 100.5 124 46.8
Ah.14g086150 Amaranthus hybridus HOM05D002690 ORTHO05D005709 2.0e-19 100.1 121 44.6
CSS0024768 Camellia sinensis var. sinensis HOM05D002690 ORTHO05D005709 2.0e-19 100.1 119 47.9
MD10G1253900 Malus domestica HOM05D002690 ORTHO05D005709 2.0e-19 100.1 122 42.6
SGA_v2.0_scaffold51G18649 Striga asiatica HOM05D002690 ORTHO05D005709 2.0e-19 100.1 120 42.5
TAR626G1080 Trochodendron aralioides HOM05D002690 ORTHO05D005709 2.0e-19 100.1 118 44.9
MELO3C022129.2 Cucumis melo HOM05D002690 ORTHO05D005709 2.6e-19 99.8 123 42.3
HanXRQChr15g0480931 Helianthus annuus HOM05D002690 ORTHO05D005709 2.6e-19 99.8 125 50.4
Sed0021012 Sechium edule HOM05D002690 ORTHO05D005709 2.6e-19 99.8 120 39.2
Sabra16G0235600 Salix brachista HOM05D002690 ORTHO05D005709 4.4e-19 99.0 118 47.5
TWI09G1166 Tripterygium wilfordii HOM05D002690 ORTHO05D005709 4.4e-19 99.0 121 46.3
Aqoxy1G01608 Aquilegia oxysepala HOM05D002690 ORTHO05D005709 5.7e-19 98.6 118 44.1
CiPaw.10G086100 Carya illinoinensis HOM05D002690 ORTHO05D005709 5.7e-19 98.6 122 43.4
Glyma.09G022200 Glycine max HOM05D002690 ORTHO05D005709 5.7e-19 98.6 118 43.2
SalBow7G2713 Salvia bowleyana HOM05D002690 ORTHO05D005709 5.7e-19 98.6 122 56.6
Potri.001G357800 Populus trichocarpa HOM05D002690 ORTHO05D005709 7.4e-19 98.2 121 52.9
vmacro03397 Vaccinium macrocarpon HOM05D002690 ORTHO05D005709 7.4e-19 98.2 121 55.4
EL10Ac8g19577 Beta vulgaris HOM05D002690 ORTHO05D005709 9.7e-19 97.8 121 43.8
Glyma.15G128500 Glycine max HOM05D002690 ORTHO05D005709 9.7e-19 97.8 118 44.1
MBI18_g10583_MAGBIO Magnolia biondii HOM05D002690 ORTHO05D005709 1.3e-18 97.4 127 41.7
Phvul.006G130200 Phaseolus vulgaris HOM05D002690 ORTHO05D005709 1.3e-18 97.4 118 43.2
Haze_05773 Corylus avellana HOM05D002690 ORTHO05D005709 1.7e-18 97.1 122 41.8
Nitab4.5_0001181g0060 Nicotiana tabacum HOM05D002690 ORTHO05D005709 1.7e-18 97.1 121 43.0
Rhsim13G0120100 Rhododendron simsii HOM05D002690 ORTHO05D005709 1.7e-18 97.1 121 53.7
MELO3C002805.2 Cucumis melo HOM05D002690 ORTHO05D005709 2.2e-18 96.7 128 42.2
Lj6g0003051 Lotus japonicus HOM05D002690 ORTHO05D005709 2.2e-18 96.7 122 43.4
Aa31LG10G6630 Aethionema arabicum HOM05D002690 ORTHO05D005709 2.8e-18 96.3 121 43.0
ECA236G0560 Erigeron canadensis HOM05D002690 ORTHO05D005709 2.8e-18 96.3 125 53.6
Lsat_1_v5_gn_4_29061 Lactuca sativa HOM05D002690 ORTHO05D005709 2.8e-18 96.3 125 42.4
CARHR029850 Cardamine hirsuta HOM05D002690 ORTHO05D005709 3.7e-18 95.9 119 46.2
CDE04G1060 Ceratophyllum demersum HOM05D002690 ORTHO05D005709 3.7e-18 95.9 116 44.8
Psat1g168520 Pisum sativum HOM05D002690 ORTHO05D005709 4.8e-18 95.5 122 41.0
Sc24g0001450 Simmondsia chinensis HOM05D002690 ORTHO05D005709 4.8e-18 95.5 121 48.8
CANSAT35G0839 Cannabis sativa HOM05D002690 ORTHO05D005709 6.3e-18 95.1 123 43.9
RcHm_v2.0_Chr5g0015861 Rosa chinensis HOM05D002690 ORTHO05D005709 1.1e-17 94.4 125 41.6
VMungo0540G2147 Vigna mungo HOM05D002690 ORTHO05D005709 1.1e-17 94.4 118 43.2
AL1G44410 Arabidopsis lyrata HOM05D002690 ORTHO05D005709 1.4e-17 94.0 118 42.4
Carub.0001s2865 Capsella rubella HOM05D002690 ORTHO05D005709 1.4e-17 94.0 118 47.5
ECA234G2820 Erigeron canadensis HOM05D002690 ORTHO05D005709 1.4e-17 94.0 120 53.3
Lalb_Chr15g0088721 Lupinus albus HOM05D002690 ORTHO05D005709 1.4e-17 94.0 131 39.7
MD05G1274200 Malus domestica HOM05D002690 ORTHO05D005709 1.4e-17 94.0 127 40.9
BcaC01g00193 Brassica carinata HOM05D002690 ORTHO05D005709 1.8e-17 93.6 118 44.1
A08p24440 Brassica napus HOM05D002690 ORTHO05D005709 1.8e-17 93.6 118 44.1
C03p76770 Brassica napus HOM05D002690 ORTHO05D005709 1.8e-17 93.6 118 44.1
BolC3t19931H Brassica oleracea HOM05D002690 ORTHO05D005709 1.8e-17 93.6 118 44.1
BraA08t34399Z Brassica rapa HOM05D002690 ORTHO05D005709 1.8e-17 93.6 118 44.1
AUR62042032 Chenopodium quinoa HOM05D002690 ORTHO05D005709 1.8e-17 93.6 124 42.7
PGR031G1950 Punica granatum HOM05D002690 ORTHO05D005709 1.8e-17 93.6 132 48.5
arahy.Tifrunner.gnm1.ann1.XVC3D4 Arachis hypogaea HOM05D002690 ORTHO05D005709 2.4e-17 93.2 124 54.8
Cfa000832 Carpinus fangiana HOM05D002690 ORTHO05D005709 2.4e-17 93.2 122 41.8
Thhalv10007064m.g Eutrema salsugineum HOM05D002690 ORTHO05D005709 2.4e-17 93.2 119 44.5
THA.LOC104798605 Tarenaya hassleriana HOM05D002690 ORTHO05D005709 2.4e-17 93.2 112 47.3
FAN21G3939 Fragaria x ananassa HOM05D002690 ORTHO05D005709 3.1e-17 92.8 131 39.7
FAN25G1940 Fragaria x ananassa HOM05D002690 ORTHO05D005709 3.1e-17 92.8 131 39.7
AT1G30460 Arabidopsis thaliana HOM05D002690 ORTHO05D005709 4.1e-17 92.4 118 41.5
FAN16G3174 Fragaria x ananassa HOM05D002690 ORTHO05D005709 4.1e-17 92.4 119 42.9
Sp1g26280 Schrenkiella parvula HOM05D002690 ORTHO05D005709 4.1e-17 92.4 119 44.5
QL05p053241 Quercus lobata HOM05D002690 ORTHO05D005709 7.0e-17 91.7 137 40.1
Lalb_Chr18g0057871 Lupinus albus HOM05D002690 ORTHO05D005709 1.2e-16 90.9 131 42.7
BcaNung05261 Brassica carinata HOM05D002690 ORTHO05D005709 2.0e-16 90.1 112 42.9
Prupe.4G089500 Prunus persica HOM05D002690 ORTHO05D005709 2.0e-16 90.1 126 39.7
arahy.Tifrunner.gnm1.ann1.9EB9RH Arachis hypogaea HOM05D002690 ORTHO05D005709 2.6e-16 89.7 123 52.0
A07p09930 Brassica napus HOM05D002690 ORTHO05D005709 3.5e-16 89.4 118 42.4
FvH4_3g09980 Fragaria vesca HOM05D002690 ORTHO05D005709 3.5e-16 89.4 52 69.2
FAN11G1563 Fragaria x ananassa HOM05D002690 ORTHO05D005709 3.5e-16 89.4 52 69.2
RcHm_v2.0_Chr5g0015731 Rosa chinensis HOM05D002690 ORTHO05D005709 4.5e-16 89.0 126 43.7
Eucgr.E02496 Eucalyptus grandis HOM05D002690 ORTHO05D005709 7.7e-16 88.2 51 70.6
C07p15130 Brassica napus HOM05D002690 ORTHO05D005709 1.0e-15 87.8 120 43.3
Nitab4.5_0000100g0020 Nicotiana tabacum HOM05D002690 ORTHO05D005709 1.3e-15 87.4 65 58.5
Nitab4.5_0000607g0100 Nicotiana tabacum HOM05D002690 ORTHO05D005709 1.3e-15 87.4 65 58.5
HPP92_015677 Vanilla planifolia HOM05D002690 ORTHO05D005709 1.5e-14 84.0 118 37.3
Sabra11G0073400 Salix brachista HOM05D002690 ORTHO05D005709 2.5e-14 83.2 50 66.0
Ca_00801_v3 Cicer arietinum L. HOM05D002690 ORTHO05D005709 3.2e-14 82.8 118 39.8
TPR.G30088 Trifolium pratense HOM05D002690 ORTHO05D005709 5.5e-14 82.0 123 39.8
Aqoxy1G01609 Aquilegia oxysepala HOM05D002690 ORTHO05D005709 7.2e-14 81.6 118 39.8
Cre24.g755647 Chlamydomonas reinhardtii HOM05D002690 ORTHO05D005709 1.2e-13 80.9 50 60.0
Peaxi162Scf00155g00068 Petunia axillaris HOM05D002690 ORTHO05D005709 3.6e-13 79.3 123 46.3
PRCOL_00005787 Prasinoderma coloniale HOM05D002690 ORTHO05D005709 8.0e-13 78.2 53 58.5
Zm00001eb224690 Zea mays HOM05D002690 ORTHO05D005709 8.0e-13 78.2 104 39.4
MCO01G443 Micromonas commoda HOM05D002690 ORTHO05D005709 2.3e-12 76.6 45 64.4
Zm00001eb273850 Zea mays HOM05D002690 ORTHO05D005709 2.8e-10 69.7 104 49.0
PRCOL_00006800 Prasinoderma coloniale HOM05D002690 ORTHO05D005709 7.0e-09 65.1 44 54.5
Os06g0677700 Oryza sativa ssp. japonica HOM05D002690 ORTHO05D005709 9.1e-09 64.7 34 73.5
Actinidia32368 Actinidia chinensis HOM05D002690 ORTHO05D005709 3.2e-06 56.2 33 69.7
CAN.G660.45 Capsicum annuum HOM05D002690 ORTHO05D005709 9.4e-06 54.7 33 63.6
GSVIVG01021617001 Vitis vinifera HOM05D002690 ORTHO05D005709 9.4e-06 54.7 33 63.6


User provided reference genes

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