Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02410 Sequoiadendron giganteum HOM05D000181 ORTHO05D014091 1.6e-39 165.6 84 100.0
CANSAT21G2338 Cannabis sativa HOM05D000181 ORTHO05D006133 5.1e-09 64.3 43 74.4
Atru.chr1.243 Acer truncatum HOM05D000181 ORTHO05D006133 8.7e-09 63.5 43 74.4
Aqoxy5G04193 Aquilegia oxysepala HOM05D000181 ORTHO05D006133 1.1e-08 63.2 43 72.1
Lj1g0010823 Lotus japonicus HOM05D000181 ORTHO05D006133 1.5e-08 62.8 65 56.9
Duzib205G0954 Durio zibethinus HOM05D000181 ORTHO05D006133 1.9e-08 62.4 43 72.1
Thecc.03G193900 Theobroma cacao HOM05D000181 ORTHO05D006133 1.9e-08 62.4 65 55.4
Actinidia08631 Actinidia chinensis HOM05D000181 ORTHO05D006133 2.5e-08 62.0 43 72.1
Ca_12683_v3 Cicer arietinum L. HOM05D000181 ORTHO05D006133 2.5e-08 62.0 43 74.4
Oeu036102.1 Olea europaea HOM05D000181 ORTHO05D006133 2.5e-08 62.0 43 72.1
Oeu037107.1 Olea europaea HOM05D000181 ORTHO05D006133 2.5e-08 62.0 43 72.1
Peaxi162Scf00904g00110 Petunia axillaris HOM05D000181 ORTHO05D006133 2.5e-08 62.0 43 72.1
ATR0320G021 Amborella trichopoda HOM05D000181 ORTHO05D006133 3.3e-08 61.6 43 72.1
CAN.G108.33 Capsicum annuum HOM05D000181 ORTHO05D006133 3.3e-08 61.6 43 72.1
Cpa.g.sc3.58 Carica papaya HOM05D000181 ORTHO05D006133 3.3e-08 61.6 43 72.1
COL.COLO4_38259 Corchorus olitorius HOM05D000181 ORTHO05D006133 3.3e-08 61.6 65 56.9
Glyma.06G126000 Glycine max HOM05D000181 ORTHO05D006133 3.3e-08 61.6 43 72.1
Gohir.A05G413300 Gossypium hirsutum HOM05D000181 ORTHO05D006133 3.3e-08 61.6 65 55.4
Gohir.D04G002800 Gossypium hirsutum HOM05D000181 ORTHO05D006133 3.3e-08 61.6 65 55.4
Gorai.012G003900 Gossypium raimondii HOM05D000181 ORTHO05D006133 3.3e-08 61.6 65 55.4
Medtr1g028390 Medicago truncatula HOM05D000181 ORTHO05D006133 3.3e-08 61.6 65 55.4
Nitab4.5_0005625g0030 Nicotiana tabacum HOM05D000974 ORTHO05D006133 3.3e-08 61.6 43 72.1
Phvul.001G062000 Phaseolus vulgaris HOM05D000181 ORTHO05D006133 3.3e-08 61.6 43 72.1
Pp3c20_7080 Physcomitrium patens HOM05D000181 ORTHO05D006133 3.3e-08 61.6 65 55.4
SGA_v2.0_scaffold44G16779 Striga asiatica HOM05D000181 ORTHO05D006133 3.3e-08 61.6 65 55.4
VMungo0647G0137 Vigna mungo HOM05D000181 ORTHO05D006133 3.3e-08 61.6 43 72.1
Cfa016370 Carpinus fangiana HOM05D000181 ORTHO05D006133 4.3e-08 61.2 65 55.4
CiPaw.05G257100 Carya illinoinensis HOM05D000181 ORTHO05D006133 4.3e-08 61.2 65 55.4
Haze_00120 Corylus avellana HOM05D000181 ORTHO05D006133 4.3e-08 61.2 65 55.4
FAN13G2920 Fragaria x ananassa HOM05D000181 ORTHO05D006133 4.3e-08 61.2 43 72.1
Rhsim03G0200000 Rhododendron simsii HOM05D000181 ORTHO05D006133 4.3e-08 61.2 43 69.8
RcHm_v2.0_Chr7g0212141 Rosa chinensis HOM05D000181 ORTHO05D006133 4.3e-08 61.2 43 67.4
vmacro06562 Vaccinium macrocarpon HOM05D000181 ORTHO05D006133 4.3e-08 61.2 43 67.4
Dinv05469 Davidia involucrata HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 69.8
FvH4_5g23210 Fragaria vesca HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 69.8
FAN08G0508 Fragaria x ananassa HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 69.8
FAN18G1629 Fragaria x ananassa HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 69.8
FAN18G4301 Fragaria x ananassa HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 69.8
HanXRQChr05g0159081 Helianthus annuus HOM05D000181 ORTHO05D014091 5.6e-08 60.8 43 69.8
HanXRQChr14g0462901 Helianthus annuus HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 69.8
Lj3A909G43 Lonicera japonica HOM05D000181 ORTHO05D006133 5.6e-08 60.8 65 55.4
Psat6g038040 Pisum sativum HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 72.1
Potri.012G000700 Populus trichocarpa HOM05D000181 ORTHO05D006133 5.6e-08 60.8 65 52.3
unitig_0.g326 Utricularia gibba HOM05D000181 ORTHO05D006133 5.6e-08 60.8 43 69.8
AL8G27820 Arabidopsis lyrata HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
AT5G53170 Arabidopsis thaliana HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
Carub.0008s1337 Capsella rubella HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
AUR62006144 Chenopodium quinoa HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
Cc02_g01810 Coffea canephora HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 72.1
Migut.F00237 Erythranthe guttata HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 67.4
Lalb_Chr04g0263691 Lupinus albus HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
Phvul.009G054200 Phaseolus vulgaris HOM05D000181 ORTHO05D006133 7.3e-08 60.5 65 55.4
Potri.015G020700 Populus trichocarpa HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
Solyc03g007330.3 Solanum lycopersicum HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
Sopen03g003290 Solanum pennellii HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
PGSC0003DMG400009105 Solanum tuberosum HOM05D000181 ORTHO05D006133 7.3e-08 60.5 43 69.8
Actinidia34203 Actinidia chinensis HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
Aa31LG3G9310 Aethionema arabicum HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
CSS0014825 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
CSS0034081 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
CSS0040067 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
CDE02G1571 Ceratophyllum demersum HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 67.4
CDE08G1191 Ceratophyllum demersum HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
AUR62019344 Chenopodium quinoa HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
Ciclev10006435m.g Citrus clementina HOM05D000974 ORTHO05D006133 9.6e-08 60.1 65 53.8
HanXRQChr13g0392551 Helianthus annuus HOM05D000181 ORTHO05D006133 9.6e-08 60.1 65 50.8
Lsat_1_v5_gn_2_134721 Lactuca sativa HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
Lj1C1013G4 Lonicera japonica HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
MBI06_g05044_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 72.1
Manes.14G008060 Manihot esculenta HOM05D000181 ORTHO05D006133 9.6e-08 60.1 65 53.8
Sed0001619 Sechium edule HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
TAR629G2510 Trochodendron aralioides HOM05D000181 ORTHO05D006133 9.6e-08 60.1 43 69.8
Dinv35311 Davidia involucrata HOM05D000181 ORTHO05D006133 1.2e-07 59.7 65 53.8
ECA238G4119 Erigeron canadensis HOM05D000181 ORTHO05D006133 1.2e-07 59.7 43 67.4
Glyma.13G041700 Glycine max HOM05D000181 ORTHO05D006133 1.2e-07 59.7 65 55.4
Glyma.14G124900 Glycine max HOM05D000181 ORTHO05D006133 1.2e-07 59.7 65 55.4
Manes.06G158000 Manihot esculenta HOM05D000181 ORTHO05D006133 1.2e-07 59.7 43 65.1
Os01g0618800 Oryza sativa ssp. japonica HOM05D000181 ORTHO05D006133 1.2e-07 59.7 43 69.8
Prupe.5G026500 Prunus persica HOM05D000181 ORTHO05D006133 1.2e-07 59.7 43 69.8
QL09p010710 Quercus lobata HOM05D000181 ORTHO05D006133 1.2e-07 59.7 65 52.3
TWI39G0839 Tripterygium wilfordii HOM05D000181 ORTHO05D006133 1.2e-07 59.7 44 68.2
VMungo1309G0972 Vigna mungo HOM05D000181 ORTHO05D006133 1.2e-07 59.7 65 55.4
Zm00001eb159640 Zea mays HOM05D000181 ORTHO05D006133 1.2e-07 59.7 43 69.8
MSTRG.8497 Avicennia marina HOM05D000181 ORTHO05D006133 1.6e-07 59.3 43 67.4
BcaB08g35680 Brassica carinata HOM05D000974 ORTHO05D006133 1.6e-07 59.3 43 69.8
CsaV3_5G000640 Cucumis sativus L. HOM05D000181 ORTHO05D006133 1.6e-07 59.3 65 52.3
BcaB05g22020 Brassica carinata HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
BcaC03g14448 Brassica carinata HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
A02p11240 Brassica napus HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
C02p18600 Brassica napus HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
BolC2t08005H Brassica oleracea HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
BraA02t06186Z Brassica rapa HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
MELO3C005873.2 Cucumis melo HOM05D000181 ORTHO05D006133 2.1e-07 58.9 65 52.3
Thhalv10012717m.g Eutrema salsugineum HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
Sp6g15350 Schrenkiella parvula HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
Sc13g0009650 Simmondsia chinensis HOM05D000181 ORTHO05D006133 2.1e-07 58.9 65 52.3
TPR.G33321 Trifolium pratense HOM05D000181 ORTHO05D006133 2.1e-07 58.9 43 67.4
GSVIVG01028703001 Vitis vinifera HOM05D000974 ORTHO05D006133 2.1e-07 58.9 43 69.8
ClCG00G002850 Citrullus lanatus HOM05D000181 ORTHO05D006133 2.8e-07 58.5 43 67.4
ClCG01G000540 Citrullus lanatus HOM05D000181 ORTHO05D006133 2.8e-07 58.5 43 67.4
MD06G1038500 Malus domestica HOM05D000181 ORTHO05D006133 2.8e-07 58.5 43 67.4
PSO135G0910 Papaver somniferum HOM05D000181 ORTHO05D006133 2.8e-07 58.5 43 65.1
PSO384G1158 Papaver somniferum HOM05D000181 ORTHO05D006133 2.8e-07 58.5 43 65.1
SGA_v2.0_scaffold192G40572 Striga asiatica HOM05D000181 ORTHO05D006133 2.8e-07 58.5 60 53.3
TWI23G1106 Tripterygium wilfordii HOM05D000181 ORTHO05D006133 2.8e-07 58.5 43 72.1
CARHR266240 Cardamine hirsuta HOM05D000181 ORTHO05D006133 3.6e-07 58.2 43 65.1
Hund11681 Selenicereus undatus HOM05D000181 ORTHO05D006133 3.6e-07 58.2 43 67.4
HPP92_004566 Vanilla planifolia HOM05D000181 ORTHO05D006133 3.6e-07 58.2 43 65.1
HPP92_028279 Vanilla planifolia HOM05D000181 ORTHO05D006133 3.6e-07 58.2 43 65.1
Zm00001eb358380 Zea mays HOM05D000181 ORTHO05D006133 3.6e-07 58.2 43 67.4
EL10Ac3g05340 Beta vulgaris HOM05D000181 ORTHO05D006133 6.2e-07 57.4 43 65.1
C09p42970 Brassica napus HOM05D000974 ORTHO05D006133 6.2e-07 57.4 43 65.1
Gohir.A09G183800 Gossypium hirsutum HOM05D000181 ORTHO05D006133 6.2e-07 57.4 65 53.8
Gohir.D09G178600 Gossypium hirsutum HOM05D000181 ORTHO05D006133 6.2e-07 57.4 65 53.8
Gorai.006G200600 Gossypium raimondii HOM05D000181 ORTHO05D006133 6.2e-07 57.4 65 53.8
Nn3g19034 Nelumbo nucifera HOM05D000181 ORTHO05D006133 6.2e-07 57.4 43 62.8
PGR042G2481 Punica granatum HOM05D000181 ORTHO05D006133 6.2e-07 57.4 65 52.3
A10p10680 Brassica napus HOM05D000181 ORTHO05D006133 8.1e-07 57.0 43 65.1
BraA10t43149Z Brassica rapa HOM05D000181 ORTHO05D006133 8.1e-07 57.0 43 65.1
TAR636G1274 Trochodendron aralioides HOM05D000181 ORTHO05D014091 1.1e-06 56.6 43 65.1
TAR636G3102 Trochodendron aralioides HOM05D000181 ORTHO05D006133 1.1e-06 56.6 43 65.1
DCAR_010617 Daucus carota HOM05D000181 ORTHO05D006133 1.4e-06 56.2 43 62.8
arahy.Tifrunner.gnm1.ann1.YE8PZ8 Arachis hypogaea HOM05D000181 ORTHO05D006133 1.8e-06 55.8 45 68.9
Sabra15G0015700 Salix brachista HOM05D000181 ORTHO05D006133 1.8e-06 55.8 65 49.2
Eucgr.A01496 Eucalyptus grandis HOM05D000181 ORTHO05D006133 4.0e-06 54.7 43 62.8
Mapoly0102s0019 Marchantia polymorpha HOM05D000181 ORTHO05D006133 5.2e-06 54.3 68 50.0


User provided reference genes

Program Settings