Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01912 Sequoiadendron giganteum HOM05D000564 ORTHO05D002780 7.9e-62 240.4 128 100.0
Mapoly0038s0034 Marchantia polymorpha HOM05D000564 ORTHO05D002780 3.5e-17 92.0 53 90.6
Pp3c3_37390 Physcomitrium patens HOM05D000564 ORTHO05D002780 5.9e-17 91.3 54 83.3
CARHR294090 Cardamine hirsuta HOM05D000564 ORTHO05D002780 6.5e-16 87.8 53 83.0
CBR_g70736 Chara braunii HOM05D000564 ORTHO05D002780 8.5e-16 87.4 53 84.9
Potri.009G167000 Populus trichocarpa HOM05D000564 ORTHO05D002780 8.5e-16 87.4 53 81.1
arahy.Tifrunner.gnm1.ann1.RY1VLM Arachis hypogaea HOM05D000564 ORTHO05D002780 1.1e-15 87.0 60 76.7
CSS0007243 Camellia sinensis var. sinensis HOM05D000564 ORTHO05D002780 1.5e-15 86.7 53 79.2
Nn6g31715 Nelumbo nucifera HOM05D000564 ORTHO05D002780 1.5e-15 86.7 53 79.2
CANSAT25G2553 Cannabis sativa HOM05D000564 ORTHO05D002780 1.9e-15 86.3 53 79.2
AL7G10220 Arabidopsis lyrata HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
AT4G38350 Arabidopsis thaliana HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
BcaC01g00220 Brassica carinata HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
BolC3t19960H Brassica oleracea HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
BraA08t34378Z Brassica rapa HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
Ciclev10030120m.g Citrus clementina HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
Thhalv10024233m.g Eutrema salsugineum HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
PSO541G5974 Papaver somniferum HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 77.4
PSO675G3157 Papaver somniferum HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 77.4
Sp7g37420 Schrenkiella parvula HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 83.0
THA.LOC104801956 Tarenaya hassleriana HOM05D000564 ORTHO05D002780 2.5e-15 85.9 54 79.6
THA.LOC104812975 Tarenaya hassleriana HOM05D000564 ORTHO05D002780 2.5e-15 85.9 54 79.6
Thecc.02G044300 Theobroma cacao HOM05D000564 ORTHO05D002780 2.5e-15 85.9 53 77.4
AUR62036842 Chenopodium quinoa HOM05D000564 ORTHO05D002780 3.2e-15 85.5 53 83.0
AUR62040814 Chenopodium quinoa HOM05D000564 ORTHO05D002780 3.2e-15 85.5 53 83.0
EL10Ac9g21241 Beta vulgaris HOM05D000564 ORTHO05D002780 4.2e-15 85.1 53 83.0
Carub.0007s0024 Capsella rubella HOM05D000564 ORTHO05D002780 4.2e-15 85.1 53 84.9
CARHR292430 Cardamine hirsuta HOM05D000564 ORTHO05D002780 4.2e-15 85.1 54 77.8
CiPaw.05G091900 Carya illinoinensis HOM05D000564 ORTHO05D002780 4.2e-15 85.1 53 81.1
Lj1g0023322 Lotus japonicus HOM05D000564 ORTHO05D002780 4.2e-15 85.1 53 75.5
Psat2g001080 Pisum sativum HOM05D000564 ORTHO05D002780 4.2e-15 85.1 53 81.1
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 5.5e-15 84.7 52 82.7
AL1G51340 Arabidopsis lyrata HOM05D000564 ORTHO05D002780 5.5e-15 84.7 54 77.8
AT1G42470 Arabidopsis thaliana HOM05D000564 ORTHO05D002780 5.5e-15 84.7 54 77.8
arahy.Tifrunner.gnm1.ann1.LDA3VX Arachis hypogaea HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 84.9
BcaC02g08217 Brassica carinata HOM05D000564 ORTHO05D002780 5.5e-15 84.7 54 77.8
BolC4t27244H Brassica oleracea HOM05D000564 ORTHO05D002780 5.5e-15 84.7 54 77.8
BraA04t17693Z Brassica rapa HOM05D000564 ORTHO05D002780 5.5e-15 84.7 54 77.8
Cpa.g.sc20.208 Carica papaya HOM05D000564 ORTHO05D002780 5.5e-15 84.7 52 82.7
Cfa005358 Carpinus fangiana HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 81.1
Haze_01987 Corylus avellana HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 81.1
ECA238G2170 Erigeron canadensis HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 83.0
Thhalv10016155m.g Eutrema salsugineum HOM05D000564 ORTHO05D002780 5.5e-15 84.7 54 77.8
HanXRQChr06g0184121 Helianthus annuus HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 83.0
Lsat_1_v5_gn_2_4580 Lactuca sativa HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 83.0
Nn5g30968 Nelumbo nucifera HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 79.2
Os04g0563801 Oryza sativa ssp. japonica HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 81.1
Sed0023022 Sechium edule HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 81.1
Sc15g0004390 Simmondsia chinensis HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 81.1
Zm00001eb429140 Zea mays HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 81.1
Zm00001eb439290 Zea mays HOM05D000564 ORTHO05D002780 5.5e-15 84.7 53 81.1
MSTRG.24928 Avicennia marina HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 79.2
Cc10_g00550 Coffea canephora HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 79.2
Eucgr.I01521 Eucalyptus grandis HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 81.1
Lalb_Chr04g0246941 Lupinus albus HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 79.2
Manes.18G004200 Manihot esculenta HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 81.1
QL11p055968 Quercus lobata HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 77.4
SMO172G0174 Selaginella moellendorffii HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 79.2
THA.LOC104824737 Tarenaya hassleriana HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 81.1
TWI56G0100 Tripterygium wilfordii HOM05D000564 ORTHO05D002780 7.2e-15 84.3 53 79.2
Actinidia15499 Actinidia chinensis HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
Actinidia17048 Actinidia chinensis HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
CSS0002623 Camellia sinensis var. sinensis HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
Cpa.g.sc26.185 Carica papaya HOM05D000564 ORTHO05D002780 9.4e-15 84.0 54 77.8
CiPaw.07G137500 Carya illinoinensis HOM05D000564 ORTHO05D002780 9.4e-15 84.0 54 77.8
DCAR_013926 Daucus carota HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
Eucgr.F01780 Eucalyptus grandis HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
HanXRQChr14g0427461 Helianthus annuus HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 81.1
MD06G1009400 Malus domestica HOM05D000564 ORTHO05D002780 9.4e-15 84.0 54 77.8
Manes.05G130900 Manihot esculenta HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
Peaxi162Scf00711g00211 Petunia axillaris HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
PGR083G1740 Punica granatum HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
QL02p014478 Quercus lobata HOM05D000564 ORTHO05D002780 9.4e-15 84.0 54 75.9
Hund06162 Selenicereus undatus HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
Thecc.08G060400 Theobroma cacao HOM05D000564 ORTHO05D002780 9.4e-15 84.0 53 79.2
Aa31sc108G40 Aethionema arabicum HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
ATR0807G132 Amborella trichopoda HOM05D000564 ORTHO05D002780 1.2e-14 83.6 53 77.4
BcaB02g10131 Brassica carinata HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
BcaC02g10930 Brassica carinata HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
C04p23550 Brassica napus HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
BolC4t23858H Brassica oleracea HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
BraA07t29566Z Brassica rapa HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
Cfa014096 Carpinus fangiana HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
Haze_22802 Corylus avellana HOM05D000564 ORTHO05D002780 1.2e-14 83.6 54 75.9
FvH4_5g25290 Fragaria vesca HOM05D000564 ORTHO05D002780 1.2e-14 83.6 53 79.2
FAN08G0043 Fragaria x ananassa HOM05D000564 ORTHO05D002780 1.2e-14 83.6 53 79.2
Hma1.2p1_1100F.1_g256960 Hydrangea macrophylla HOM05D000564 ORTHO05D002780 1.2e-14 83.6 53 77.4
Solyc04g082490.3 Solanum lycopersicum HOM05D000564 ORTHO05D002780 1.2e-14 83.6 53 79.2
PGSC0003DMG400009984 Solanum tuberosum HOM05D000564 ORTHO05D002780 1.2e-14 83.6 53 79.2
Aa31LG6G16760 Aethionema arabicum HOM05D000564 ORTHO05D002780 1.6e-14 83.2 57 73.7
CAN.G311.125 Capsicum annuum HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
ClCG02G009930 Citrullus lanatus HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 79.2
Ciclev10000039m.g Citrus clementina HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
CsaV3_6G011220 Cucumis sativus L. HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 79.2
Dinv31954 Davidia involucrata HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
Duzib132G1131 Durio zibethinus HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 75.5
Glyma.02G310900 Glycine max HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 81.1
Glyma.04G017300 Glycine max HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 75.5
Gohir.A01G175200 Gossypium hirsutum HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 75.5
Gohir.D01G166300 Gossypium hirsutum HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 75.5
Gorai.002G206800 Gossypium raimondii HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 75.5
Lj4C806T13 Lonicera japonica HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
LjContig00081g0019328 Lotus japonicus HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 81.1
Oeu000697.1 Olea europaea HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
Oeu026509.1 Olea europaea HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
Phvul.009G011300 Phaseolus vulgaris HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 75.5
Potri.002G009600 Populus trichocarpa HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
Prupe.5G011100 Prunus persica HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
Prupe.8G178600 Prunus persica HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
RcHm_v2.0_Chr7g0215501 Rosa chinensis HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
Sopen04g036110 Solanum pennellii HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
SGA_v2.0_scaffold587G53060 Striga asiatica HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
THA.LOC104813176 Tarenaya hassleriana HOM05D000564 ORTHO05D002780 1.6e-14 83.2 54 75.9
TPR.G18634 Trifolium pratense HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 81.1
vmacro21805 Vaccinium macrocarpon HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
VMungo1309G2497 Vigna mungo HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 75.5
GSVIVG01013373001 Vitis vinifera HOM05D000564 ORTHO05D002780 1.6e-14 83.2 53 77.4
MELO3C013507.2 Cucumis melo HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 79.2
Duzib041G0747 Durio zibethinus HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 77.4
Gohir.A01G104800 Gossypium hirsutum HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 77.4
Gohir.D01G090000 Gossypium hirsutum HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 77.4
Gorai.002G115700 Gossypium raimondii HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 77.4
Manes.11G110701 Manihot esculenta HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 81.1
Sabra02G0007000 Salix brachista HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 77.4
SGA_v2.0_scaffold319G48542 Striga asiatica HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 77.4
TWI31G1441 Tripterygium wilfordii HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 81.1
GSVIVG01023884001 Vitis vinifera HOM05D000564 ORTHO05D002780 2.1e-14 82.8 53 77.4
Atru.chr13.127 Acer truncatum HOM05D000564 ORTHO05D002780 2.7e-14 82.4 86 55.8
BcaB06g28180 Brassica carinata HOM05D000564 ORTHO05D002780 2.7e-14 82.4 54 75.9
Pp3c2_3460 Physcomitrium patens HOM05D000564 ORTHO05D002780 2.7e-14 82.4 54 75.9
Potri.005G251800 Populus trichocarpa HOM05D000564 ORTHO05D002780 2.7e-14 82.4 83 56.6
VMungo0647G1134 Vigna mungo HOM05D000564 ORTHO05D002780 2.7e-14 82.4 53 79.2
arahy.Tifrunner.gnm1.ann1.TAF7VU Arachis hypogaea HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 75.5
A07p18520 Brassica napus HOM05D000564 ORTHO05D002780 3.6e-14 82.0 52 76.9
CiPaw.08G074200 Carya illinoinensis HOM05D000564 ORTHO05D002780 3.6e-14 82.0 54 74.1
Ca_15428_v3 Cicer arietinum L. HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 75.5
Glyma.06G017700 Glycine max HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 73.6
MD10G1139800 Malus domestica HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 77.4
Psat5g010080 Pisum sativum HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 75.5
PGR142G4088 Punica granatum HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 77.4
TPR.G38096 Trifolium pratense HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 75.5
TAR628G0472 Trochodendron aralioides HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 75.5
unitig_747.g21540 Utricularia gibba HOM05D000564 ORTHO05D002780 3.6e-14 82.0 53 75.5
ClCG11G018740 Citrullus lanatus HOM05D000564 ORTHO05D002780 4.7e-14 81.6 53 77.4
COL.COLO4_17925 Corchorus olitorius HOM05D000564 ORTHO05D002780 4.7e-14 81.6 53 73.6
Lalb_Chr08g0246451 Lupinus albus HOM05D000564 ORTHO05D002780 4.7e-14 81.6 53 73.6
Lalb_Chr11g0061581 Lupinus albus HOM05D000564 ORTHO05D002780 4.7e-14 81.6 53 73.6
Lalb_Chr23g0265741 Lupinus albus HOM05D000564 ORTHO05D002780 4.7e-14 81.6 53 73.6
Rhsim06G0006500 Rhododendron simsii HOM05D000564 ORTHO05D002780 4.7e-14 81.6 53 75.5
Rhsim11G0197500 Rhododendron simsii HOM05D000564 ORTHO05D002780 4.7e-14 81.6 53 75.5
Duzib093G0382 Durio zibethinus HOM05D000564 ORTHO05D002780 6.1e-14 81.3 53 75.5
Glyma.14G001500 Glycine max HOM05D000564 ORTHO05D002780 6.1e-14 81.3 53 77.4
Lj5A172G81 Lonicera japonica HOM05D000564 ORTHO05D002780 6.1e-14 81.3 53 75.5
HPP92_001734 Vanilla planifolia HOM05D000564 ORTHO05D002780 6.1e-14 81.3 54 72.2
CANSAT25G3484 Cannabis sativa HOM05D000564 ORTHO05D002780 8.0e-14 80.9 53 75.5
RcHm_v2.0_Chr6g0280781 Rosa chinensis HOM05D000564 ORTHO05D002780 8.0e-14 80.9 53 75.5
Aqoxy6G01639 Aquilegia oxysepala HOM05D000564 ORTHO05D002780 1.0e-13 80.5 53 73.6
FvH4_2g16650 Fragaria vesca HOM05D000564 ORTHO05D002780 1.0e-13 80.5 53 75.5
FAN24G2145 Fragaria x ananassa HOM05D000564 ORTHO05D002780 1.0e-13 80.5 53 75.5
Sed0019066 Sechium edule HOM05D000564 ORTHO05D002780 1.0e-13 80.5 53 75.5
CDE06G1400 Ceratophyllum demersum HOM05D000564 ORTHO05D002780 1.4e-13 80.1 53 73.6
DCAR_006284 Daucus carota HOM05D000564 ORTHO05D002780 1.4e-13 80.1 53 77.4
Phvul.008G291900 Phaseolus vulgaris HOM05D000564 ORTHO05D002780 1.4e-13 80.1 53 75.5
MELO3C017027.2 Cucumis melo HOM05D000564 ORTHO05D002780 1.8e-13 79.7 53 75.5
CsaV3_4G037280 Cucumis sativus L. HOM05D000564 ORTHO05D002780 1.8e-13 79.7 53 75.5
FAN15G2627 Fragaria x ananassa HOM05D000564 ORTHO05D002780 1.8e-13 79.7 53 73.6
A04p21250 Brassica napus HOM05D000564 ORTHO05D002780 2.3e-13 79.3 60 71.7
Ah.00g000920 Amaranthus hybridus HOM05D000564 ORTHO05D002780 4.0e-13 78.6 49 83.7
AUR62012915 Chenopodium quinoa HOM05D000564 ORTHO05D002780 5.2e-13 78.2 96 56.2
arahy.Tifrunner.gnm1.ann1.7A0A2P Arachis hypogaea HOM05D000564 ORTHO05D002780 3.7e-11 72.0 47 74.5
Cre12.g550900 Chlamydomonas reinhardtii HOM05D000564 ORTHO05D002780 1.4e-10 70.1 53 64.2
Cfa025027 Carpinus fangiana HOM05D000564 ORTHO05D002780 2.0e-09 66.2 53 64.2
FAN04G1562 Fragaria x ananassa HOM05D000564 ORTHO05D002780 6.5e-08 61.2 53 64.2
FAN18G0314 Fragaria x ananassa HOM05D000564 ORTHO05D002780 6.5e-08 61.2 53 64.2


User provided reference genes

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