Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01163 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.5e-261 904.8 439 100.0
SEGI_28539 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.2e-127 459.9 474 52.5
SEGI_14546 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.7e-127 459.1 474 52.7
SEGI_20413 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.5e-124 448.4 475 51.4
SEGI_03751 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 8.0e-122 441.4 480 51.9
SEGI_06130 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 8.0e-122 441.4 480 51.9
SEGI_05804 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 9.4e-115 417.9 477 50.5
SEGI_41445 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.6e-58 229.9 454 33.9
SEGI_08952 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.2e-58 229.2 465 35.5
SEGI_29838 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.0e-56 224.2 477 31.9
SEGI_11018 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.3e-55 221.5 463 33.7
SEGI_33726 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.3e-52 210.7 495 32.7
SEGI_00368 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.1e-49 200.3 459 32.2
SEGI_02565 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.1e-49 200.3 459 32.2
SEGI_39701 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.2e-37 161.8 409 29.8
SEGI_28572 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.1e-37 159.5 472 27.8
SEGI_25429 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.1e-36 156.4 367 31.6
SEGI_36134 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.1e-36 156.4 409 29.8
SEGI_28309 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 8.7e-36 155.6 481 27.7
SEGI_37096 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.2e-15 87.8 105 44.8
SEGI_31284 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.5e-14 84.3 83 51.8
SEGI_23709 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 1.6e-13 81.6 123 35.0
SEGI_41089 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 8.0e-13 79.3 110 39.1
SEGI_23257 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.0e-12 77.0 110 37.3
SEGI_29973 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 1.5e-11 75.1 108 38.0
SEGI_41543 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.6e-11 74.3 164 33.5
SEGI_11115 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 1.7e-10 71.6 108 38.0
SEGI_23647 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 3.7e-10 70.5 108 31.5
SEGI_02057 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 4.8e-10 70.1 108 31.5
SEGI_07686 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 4.8e-10 70.1 108 31.5
SEGI_13241 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 4.8e-10 70.1 108 31.5
SEGI_14510 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 4.8e-10 70.1 108 31.5
SEGI_38313 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 4.8e-10 70.1 108 31.5
SEGI_18883 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 1.1e-09 68.9 108 37.0
SEGI_20055 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 1.4e-09 68.6 108 31.5
Ah.11g046820 Amaranthus hybridus HOM05D001362 ORTHO05D001310 7.7e-08 62.8 51 49.0
AUR62041692 Chenopodium quinoa HOM05D001362 ORTHO05D001310 7.7e-08 62.8 51 49.0
Zm00001eb037010 Zea mays HOM05D001362 ORTHO05D001310 1.0e-07 62.4 43 58.1
SEGI_19179 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.3e-07 62.0 126 34.9
Os09g0510700 Oryza sativa ssp. japonica HOM05D001362 ORTHO05D001310 2.2e-07 61.2 43 58.1
THA.LOC104819423 Tarenaya hassleriana HOM05D001362 ORTHO05D001310 2.2e-07 61.2 67 41.8
AUR62009527 Chenopodium quinoa HOM05D001362 ORTHO05D001310 2.9e-07 60.8 51 47.1
Hund10046 Selenicereus undatus HOM05D001362 ORTHO05D001310 3.8e-07 60.5 51 43.1
BcaB01g05364 Brassica carinata HOM05D001362 ORTHO05D001310 5.0e-07 60.1 76 39.5
A06p28680 Brassica napus HOM05D001362 ORTHO05D001310 5.0e-07 60.1 57 42.1
C03p65120 Brassica napus HOM05D001362 ORTHO05D001310 5.0e-07 60.1 57 42.1
BolC3t18766H Brassica oleracea HOM05D001362 ORTHO05D001310 5.0e-07 60.1 57 42.1
BraA06t25808Z Brassica rapa HOM05D001362 ORTHO05D001310 5.0e-07 60.1 57 42.1
Hund02503 Selenicereus undatus HOM05D001362 ORTHO05D001310 5.0e-07 60.1 48 50.0
Zm00001eb175550 Zea mays HOM05D001362 ORTHO05D001310 5.0e-07 60.1 43 55.8
AUR62005710 Chenopodium quinoa HOM05D001362 ORTHO05D001310 6.5e-07 59.7 69 40.6
AUR62028845 Chenopodium quinoa HOM05D001362 ORTHO05D001310 6.5e-07 59.7 69 40.6
SEGI_12606 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.5e-07 59.7 129 35.7
SEGI_21161 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.5e-07 59.7 129 35.7
Ah.02g131480 Amaranthus hybridus HOM05D001362 ORTHO05D001310 8.5e-07 59.3 58 39.7
EL10Ac5g11298 Beta vulgaris HOM05D001362 ORTHO05D001310 8.5e-07 59.3 49 49.0
EL10Ac7g17943 Beta vulgaris HOM05D001362 ORTHO05D001310 8.5e-07 59.3 49 49.0
BcaB02g09610 Brassica carinata HOM05D001362 ORTHO05D001310 1.1e-06 58.9 53 43.4
Ciclev10030874m.g Citrus clementina HOM05D001362 ORTHO05D001310 1.1e-06 58.9 47 53.2
Lsat_1_v5_gn_4_1580 Lactuca sativa HOM05D001362 ORTHO05D001310 1.1e-06 58.9 58 43.1
SEGI_00695 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-06 58.9 155 30.3
Cpa.g.sc13.160 Carica papaya HOM05D001362 ORTHO05D001310 1.5e-06 58.5 64 42.2
Nn4g22146 Nelumbo nucifera HOM05D001362 ORTHO05D001310 1.5e-06 58.5 57 42.1
Os08g0537600 Oryza sativa ssp. japonica HOM05D001362 ORTHO05D001310 1.5e-06 58.5 76 40.8
RcHm_v2.0_Chr7g0188801 Rosa chinensis HOM05D001362 ORTHO05D001310 1.5e-06 58.5 45 53.3
Dinv23215 Davidia involucrata HOM05D001362 ORTHO05D001310 1.9e-06 58.2 56 46.4
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.5e-06 57.8 45 51.1
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.5e-06 57.8 45 51.1
PGR004G1729 Punica granatum HOM05D001362 ORTHO05D001310 3.2e-06 57.4 139 25.9
ATR0582G329 Amborella trichopoda HOM05D001362 ORTHO05D001310 4.2e-06 57.0 55 45.5
FvH4_5g09370 Fragaria vesca HOM05D001362 ORTHO05D001310 4.2e-06 57.0 45 51.1
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 4.2e-06 57.0 45 51.1
FAN18G0210 Fragaria x ananassa HOM05D001362 ORTHO05D001310 4.2e-06 57.0 45 51.1
Lj6A837G32 Lonicera japonica HOM05D001362 ORTHO05D001310 4.2e-06 57.0 53 43.4
CDE02G0857 Ceratophyllum demersum HOM05D001362 ORTHO05D001310 5.5e-06 56.6 51 43.1
MD14G1148100 Malus domestica HOM05D001362 ORTHO05D001310 5.5e-06 56.6 57 45.6
Hund25506 Selenicereus undatus HOM05D001362 ORTHO05D001310 5.5e-06 56.6 59 37.3
TWI23G0713 Tripterygium wilfordii HOM05D001362 ORTHO05D001310 5.5e-06 56.6 43 55.8
Ah.03g135580 Amaranthus hybridus HOM05D001362 ORTHO05D001310 7.2e-06 56.2 58 37.9
EL10Ac6g13605 Beta vulgaris HOM05D001362 ORTHO05D001310 7.2e-06 56.2 58 37.9
Ca_10881_v3 Cicer arietinum L. HOM05D001362 ORTHO05D001310 7.2e-06 56.2 47 48.9
Dinv19301 Davidia involucrata HOM05D001362 ORTHO05D001310 7.2e-06 56.2 49 46.9
Nitab4.5_0002584g0040 Nicotiana tabacum HOM05D001362 ORTHO05D001310 7.2e-06 56.2 63 38.1
CSS0045490 Camellia sinensis var. sinensis HOM05D001362 ORTHO05D001310 9.4e-06 55.8 60 45.0
Cc00_g12240 Coffea canephora HOM05D001362 ORTHO05D001310 9.4e-06 55.8 45 53.3
PSO017G4969 Papaver somniferum HOM05D001362 ORTHO05D001310 9.4e-06 55.8 43 48.8
Sopen03g037170 Solanum pennellii HOM05D001362 ORTHO05D001310 9.4e-06 55.8 45 51.1
TAR629G2226 Trochodendron aralioides HOM05D001362 ORTHO05D001310 9.4e-06 55.8 45 46.7


User provided reference genes

Program Settings