Gene: Cc00_g12240
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g12240
- Transcript Identifier Cc00_g12240.1
- Gene Type Coding gene
- Location chr0 : 94824304-94834089 : positive
Gene Family Information
- ID HOM05D001362
- #Genes/#Species 459/100
- Phylogenetic origin
- ID ORTHO05D001310
- #Genes/#Species 434/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB I1KWR3
- UniProtKB Q5W7F2
- UniProtKB Q9FIT8
- UniProtKB B9GZ26
- UniProtKB D7TFH8
- UniProtKB Q9SMX5
- id GSCOCG00008602001
Descriptions
- Description ADP-ribosylation factor GTPase-activating protein AGD3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007010 | ISO | PLAZA Integrative Orthology | cytoskeleton organization | AT5G61980 |
| GO:0048768 | ISO | PLAZA Integrative Orthology | root hair cell tip growth | AT5G61980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005096 | IEA | InterPro | GTPase activator activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0030139 | ISO | PLAZA Integrative Orthology | endocytic vesicle | AT5G61980 |
| GO:0035618 | ISO | PLAZA Integrative Orthology | root hair | AT5G61980 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G61980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035670 | Plant AGD1/2/3/4, BAR domain |
| IPR027267 | AH/BAR domain superfamily |
| IPR001164 | Arf GTPase activating protein |
| IPR038508 | ArfGAP domain superfamily |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR002110 | Ankyrin repeat |
| IPR011993 | PH-like domain superfamily |
| IPR037278 | ARFGAP/RecO-like zinc finger |
| IPR001849 | Pleckstrin homology domain |
| IPR004148 | BAR domain |
| Mapman id | Description |
|---|---|
| 22.3.2.3.1 | Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein |