Gene: FAN04G0329
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN04G0329
- Transcript Identifier FAN04G0329.1
- Gene Type Coding gene
- Location Fvb5-4 : 4694880-4712036 : negative
Gene Family Information
- ID HOM05D004329
- #Genes/#Species 165/99
- Phylogenetic origin
- ID ORTHO05D005516
- #Genes/#Species 156/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb5-4-snap-gene-47.47.v1.0.a1
- pacid 50458971
Descriptions
- Description PF00169//PF01412//PF03114//PF13637//PF16969 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_4) // RNA-binding signal recognition particle 68 (SRP68)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006614 | IEA | InterPro | SRP-dependent cotranslational protein targeting to membrane |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005096 | IEA | InterPro | GTPase activator activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005047 | IEA | InterPro | signal recognition particle binding | |
| GO:0008312 | IEA | InterPro | 7S RNA binding | |
| GO:0030942 | IEA | InterPro | endoplasmic reticulum signal peptide binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005786 | IEA | InterPro | signal recognition particle, endoplasmic reticulum targeting | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G61970 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001164 | Arf GTPase activating protein |
| IPR004148 | BAR domain |
| IPR026258 | Signal recognition particle subunit SRP68 |
| IPR027267 | AH/BAR domain superfamily |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR035670 | Plant AGD1/2/3/4, BAR domain |
| IPR011993 | PH-like domain superfamily |
| IPR001849 | Pleckstrin homology domain |
| IPR034652 | Signal recognition particle subunit SRP68, RNA-binding domain |
| IPR038253 | SRP68, N-terminal domain superfamily |
| IPR038508 | ArfGAP domain superfamily |
| IPR002110 | Ankyrin repeat |
| IPR037278 | ARFGAP/RecO-like zinc finger |
| Mapman id | Description |
|---|---|
| 22.3.2.3.1 | Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein |
| 23.3.1.1.6 | Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP68 |