Gene: ATR0582G329

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0582G329
  • Transcript Identifier ATR0582G329.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00016 : 2616212-2630615 : positive

Gene Family Information

  • ID HOM05D001362
  • #Genes/#Species 459/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00016.123.v1.0
  • pacid 31569654

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT5G13300
GO:0007010
ISO
PLAZA Integrative Orthologycytoskeleton organization AT5G61980
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT5G13300
GO:0048768
ISO
PLAZA Integrative Orthologyroot hair cell tip growth AT5G61980
GO:0006897
ISO
PLAZA Integrative Orthologyendocytosis AT5G13300
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT5G13300
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G13300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005096
IEA
InterProGTPase activator activity
GO:0035091
ISO
PLAZA Integrative Orthologyphosphatidylinositol binding AT5G13300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0030140
ISO
PLAZA Integrative Orthologytrans-Golgi network transport vesicle AT5G13300
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G61980
GO:0030139
ISO
PLAZA Integrative Orthologyendocytic vesicle AT5G61980
GO:0035618
ISO
PLAZA Integrative Orthologyroot hair AT5G61980
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G13300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020683 Ankyrin repeat-containing domain
IPR004148 BAR domain
IPR001849 Pleckstrin homology domain
IPR036770 Ankyrin repeat-containing domain superfamily
IPR037278 ARFGAP/RecO-like zinc finger
IPR001164 Arf GTPase activating protein
IPR027267 AH/BAR domain superfamily
IPR038508 ArfGAP domain superfamily
IPR002110 Ankyrin repeat
IPR035670 Plant AGD1/2/3/4, BAR domain
IPR011993 PH-like domain superfamily
Mapman id Description
22.3.2.3.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein