Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00782 Sequoiadendron giganteum HOM05D005339 ORTHO05D006561 4.2e-140 501.5 286 100.0
ATR0810G182 Amborella trichopoda HOM05D005339 ORTHO05D006561 7.9e-70 268.1 211 80.6
Nn7g36850 Nelumbo nucifera HOM05D005339 ORTHO05D006561 1.8e-69 266.9 211 79.1
Aqoxy5G01796 Aquilegia oxysepala HOM05D005339 ORTHO05D006561 3.0e-69 266.2 211 81.5
Thecc.02G066900 Theobroma cacao HOM05D005339 ORTHO05D006561 3.9e-69 265.8 212 80.7
TAR376G0223 Trochodendron aralioides HOM05D005339 ORTHO05D006561 3.3e-68 262.7 211 78.7
GSVIVG01024083001 Vitis vinifera HOM05D005339 ORTHO05D006561 4.3e-68 262.3 209 80.9
Gohir.A03G203200 Gossypium hirsutum HOM05D005339 ORTHO05D006561 5.6e-68 261.9 211 79.1
Gorai.005G252300 Gossypium raimondii HOM05D005339 ORTHO05D006561 5.6e-68 261.9 211 79.1
Rhsim11G0187800 Rhododendron simsii HOM05D005339 ORTHO05D006561 5.6e-68 261.9 211 79.1
Gohir.D02G224500 Gossypium hirsutum HOM05D005339 ORTHO05D006561 2.8e-67 259.6 211 78.7
SMO117G0089 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 2.8e-67 259.6 209 77.5
MELO3C020783.2 Cucumis melo HOM05D005339 ORTHO05D006561 6.2e-67 258.5 212 78.3
CsaV3_2G015710 Cucumis sativus L. HOM05D005339 ORTHO05D006561 6.2e-67 258.5 212 78.3
Zm00001eb103630 Zea mays HOM05D005339 ORTHO05D006561 8.1e-67 258.1 209 78.5
ClCG02G011380 Citrullus lanatus HOM05D005339 ORTHO05D006561 1.1e-66 257.7 212 78.3
AagrBONN_evm.TU.Sc2ySwM_344.4430 Anthoceros agrestis HOM05D005339 ORTHO05D006561 1.4e-66 257.3 209 76.6
Manes.11G090000 Manihot esculenta HOM05D005339 ORTHO05D006561 1.8e-66 256.9 213 77.5
Actinidia20485 Actinidia chinensis HOM05D005339 ORTHO05D006561 2.4e-66 256.5 211 78.7
Ciclev10028803m.g Citrus clementina HOM05D005339 ORTHO05D006561 2.4e-66 256.5 211 71.6
THA.LOC104807785 Tarenaya hassleriana HOM05D005339 ORTHO05D006561 3.1e-66 256.1 211 78.2
Pp3c17_13560 Physcomitrium patens HOM05D005339 ORTHO05D006561 4.0e-66 255.8 212 73.6
ECA246G3996 Erigeron canadensis HOM05D005339 ORTHO05D006561 6.9e-66 255.0 206 77.7
Os09g0535300 Oryza sativa ssp. japonica HOM05D005339 ORTHO05D006561 6.9e-66 255.0 210 78.1
Manes.04G078200 Manihot esculenta HOM05D005339 ORTHO05D006561 9.0e-66 254.6 213 77.5
arahy.Tifrunner.gnm1.ann1.RMHT0B Arachis hypogaea HOM05D005339 ORTHO05D006561 1.2e-65 254.2 210 79.0
arahy.Tifrunner.gnm1.ann1.UV505Z Arachis hypogaea HOM05D005339 ORTHO05D006561 1.2e-65 254.2 210 79.0
Mapoly0015s0022 Marchantia polymorpha HOM05D005339 ORTHO05D006561 1.2e-65 254.2 209 70.3
CDE04G0258 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 1.5e-65 253.8 211 77.3
TWI31G0803 Tripterygium wilfordii HOM05D005339 ORTHO05D006561 1.5e-65 253.8 208 79.3
CANSAT25G3263 Cannabis sativa HOM05D005339 ORTHO05D006561 2.0e-65 253.4 211 78.7
Eucgr.I01375 Eucalyptus grandis HOM05D005339 ORTHO05D006561 2.0e-65 253.4 214 75.7
Potri.009G129700 Populus trichocarpa HOM05D005339 ORTHO05D006561 2.6e-65 253.1 211 77.3
Prupe.7G010600 Prunus persica HOM05D005339 ORTHO05D006561 2.6e-65 253.1 211 76.8
PGR142G1539 Punica granatum HOM05D005339 ORTHO05D006561 2.6e-65 253.1 208 76.0
Cc11_g02780 Coffea canephora HOM05D005339 ORTHO05D006561 3.4e-65 252.7 212 78.8
Lj4g0026543 Lotus japonicus HOM05D005339 ORTHO05D006561 3.4e-65 252.7 211 77.3
Sed0019675 Sechium edule HOM05D005339 ORTHO05D006561 3.4e-65 252.7 212 75.9
CDE02G2588 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 4.5e-65 252.3 211 68.2
PSO700G0269 Papaver somniferum HOM05D005339 ORTHO05D006561 4.5e-65 252.3 213 77.9
HanXRQChr15g0478851 Helianthus annuus HOM05D005339 ORTHO05D006561 5.8e-65 251.9 208 76.9
PGSC0003DMG400001633 Solanum tuberosum HOM05D005339 ORTHO05D006561 7.6e-65 251.5 211 77.7
MBI19_g09243_MAGBIO Magnolia biondii HOM05D005339 ORTHO05D006561 1.0e-64 251.1 237 71.7
RcHm_v2.0_Chr2g0122771 Rosa chinensis HOM05D005339 ORTHO05D006561 1.0e-64 251.1 211 76.8
Hma1.2p1_0032F.1_g019680 Hydrangea macrophylla HOM05D005339 ORTHO05D006561 1.3e-64 250.8 211 76.8
Pp3c2_11550 Physcomitrium patens HOM05D005339 ORTHO05D006561 1.3e-64 250.8 212 71.7
Psat7g008680 Pisum sativum HOM05D005339 ORTHO05D006561 1.3e-64 250.8 215 76.7
CSS0049457 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 1.7e-64 250.4 212 75.9
Duzib132G0613 Durio zibethinus HOM05D005339 ORTHO05D006561 1.7e-64 250.4 218 76.1
Glyma.08G042200 Glycine max HOM05D005339 ORTHO05D006561 1.7e-64 250.4 213 77.0
Medtr8g105120 Medicago truncatula HOM05D005339 ORTHO05D006561 1.7e-64 250.4 214 76.2
Hund06405 Selenicereus undatus HOM05D005339 ORTHO05D006561 1.7e-64 250.4 210 73.3
Glyma.05G234700 Glycine max HOM05D005339 ORTHO05D006561 2.2e-64 250.0 211 76.8
Potri.004G168400 Populus trichocarpa HOM05D005339 ORTHO05D006561 3.8e-64 249.2 211 77.3
Sabra04G0112800 Salix brachista HOM05D005339 ORTHO05D006561 4.9e-64 248.8 211 77.3
AT2G21150 Arabidopsis thaliana HOM05D005339 ORTHO05D006561 8.4e-64 248.1 218 70.2
PSO170G1371 Papaver somniferum HOM05D005339 ORTHO05D006561 1.4e-63 247.3 213 77.0
Lalb_Chr11g0072011 Lupinus albus HOM05D005339 ORTHO05D006561 2.5e-63 246.5 211 75.8
Ca_17265_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 3.2e-63 246.1 215 75.3
Ca_17286_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 3.2e-63 246.1 215 75.3
Sp4g00300 Schrenkiella parvula HOM05D005339 ORTHO05D006561 3.2e-63 246.1 212 74.5
CAN.G588.26 Capsicum annuum HOM05D005339 ORTHO05D006561 7.1e-63 245.0 211 76.3
vmacro02249 Vaccinium macrocarpon HOM05D005339 ORTHO05D006561 7.1e-63 245.0 211 76.3
Lsat_1_v5_gn_3_45301 Lactuca sativa HOM05D005339 ORTHO05D006561 1.2e-62 244.2 210 75.7
CiPaw.06G125300 Carya illinoinensis HOM05D005339 ORTHO05D006561 1.6e-62 243.8 211 73.5
DCAR_022955 Daucus carota HOM05D005339 ORTHO05D006561 1.6e-62 243.8 229 71.6
DCAR_022956 Daucus carota HOM05D005339 ORTHO05D006561 1.6e-62 243.8 229 71.6
Migut.B00167 Erythranthe guttata HOM05D005339 ORTHO05D006561 1.6e-62 243.8 213 75.6
AL4G10240 Arabidopsis lyrata HOM05D005339 ORTHO05D006561 2.1e-62 243.4 218 68.8
Lalb_Chr23g0275171 Lupinus albus HOM05D005339 ORTHO05D006561 2.1e-62 243.4 211 74.4
Peaxi162Scf00362g01036 Petunia axillaris HOM05D005339 ORTHO05D006561 2.1e-62 243.4 211 76.8
Cpa.g.sc37.191 Carica papaya HOM05D005339 ORTHO05D006561 2.7e-62 243.0 259 65.3
CiPaw.05G077200 Carya illinoinensis HOM05D005339 ORTHO05D006561 2.7e-62 243.0 210 74.3
Cfa005184 Carpinus fangiana HOM05D005339 ORTHO05D006561 3.5e-62 242.7 210 72.9
Thhalv10000232m.g Eutrema salsugineum HOM05D005339 ORTHO05D006561 4.6e-62 242.3 212 73.1
Aa31LG7G15530 Aethionema arabicum HOM05D005339 ORTHO05D006561 6.0e-62 241.9 209 74.2
AUR62013089 Chenopodium quinoa HOM05D005339 ORTHO05D006561 6.0e-62 241.9 208 73.6
Solyc01g111140.3 Solanum lycopersicum HOM05D005339 ORTHO05D006561 6.0e-62 241.9 211 77.3
Sopen01g053200 Solanum pennellii HOM05D005339 ORTHO05D006561 6.0e-62 241.9 211 77.3
AUR62010093 Chenopodium quinoa HOM05D005339 ORTHO05D006561 7.9e-62 241.5 208 73.1
Nitab4.5_0000283g0140 Nicotiana tabacum HOM05D005339 ORTHO05D006561 1.3e-61 240.7 211 76.8
Nitab4.5_0000980g0240 Nicotiana tabacum HOM05D005339 ORTHO05D006561 1.3e-61 240.7 211 76.8
QL11p047539 Quercus lobata HOM05D005339 ORTHO05D006561 2.3e-61 240.0 211 73.9
QL11p047573 Quercus lobata HOM05D005339 ORTHO05D006561 2.3e-61 240.0 211 73.9
Atru.chr5.3227 Acer truncatum HOM05D005339 ORTHO05D006561 3.9e-61 239.2 208 75.0
Phvul.002G320300 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 5.1e-61 238.8 214 74.3
Carub.0004s0017 Capsella rubella HOM05D005339 ORTHO05D006561 6.7e-61 238.4 218 67.4
Sabra09G0099200 Salix brachista HOM05D005339 ORTHO05D006561 6.7e-61 238.4 234 69.2
VMungo0251G0038 Vigna mungo HOM05D005339 ORTHO05D006561 2.5e-60 236.5 214 74.3
BcaB08g34965 Brassica carinata HOM05D005339 ORTHO05D006561 4.3e-60 235.7 210 71.4
MD12G1008800 Malus domestica HOM05D005339 ORTHO05D006561 1.3e-59 234.2 211 72.0
SGA_v2.0_scaffold58G20457 Striga asiatica HOM05D005339 ORTHO05D006561 1.3e-59 234.2 233 70.4
MD14G1006100 Malus domestica HOM05D005339 ORTHO05D006561 2.1e-59 233.4 213 71.4
A09p58500 Brassica napus HOM05D005339 ORTHO05D006561 4.8e-59 232.3 211 71.6
unitig_744.g24266 Utricularia gibba HOM05D005339 ORTHO05D006561 6.3e-59 231.9 228 71.1
A04p15920 Brassica napus HOM05D005339 ORTHO05D006561 1.8e-58 230.3 207 71.5
FvH4_1g25110 Fragaria vesca HOM05D005339 ORTHO05D006561 2.4e-58 229.9 211 73.5
BcaC07g41172 Brassica carinata HOM05D005339 ORTHO05D006561 4.1e-58 229.2 212 71.2
C04p50370 Brassica napus HOM05D005339 ORTHO05D006561 4.1e-58 229.2 210 70.5
C08p41800 Brassica napus HOM05D005339 ORTHO05D006561 4.1e-58 229.2 212 71.2
BolC4t26635H Brassica oleracea HOM05D005339 ORTHO05D006561 4.1e-58 229.2 210 70.5
BolC8t51743H Brassica oleracea HOM05D005339 ORTHO05D006561 2.0e-57 226.9 212 70.3
Oeu055639.3 Olea europaea HOM05D005339 ORTHO05D006561 2.0e-57 226.9 211 73.5
BraA04t17225Z Brassica rapa HOM05D005339 ORTHO05D006561 1.3e-56 224.2 215 68.4
Dinv41975 Davidia involucrata HOM05D005339 ORTHO05D006561 1.3e-56 224.2 211 73.5
LjContig00310g0009118 Lotus japonicus HOM05D005339 ORTHO05D006561 1.7e-56 223.8 212 72.2
SalBow6G1349 Salvia bowleyana HOM05D005339 ORTHO05D006561 8.5e-56 221.5 222 70.3
Ah.01g009160 Amaranthus hybridus HOM05D005339 ORTHO05D006561 3.0e-53 213.0 209 68.9
BraA09t41237Z Brassica rapa HOM05D005339 ORTHO05D006561 1.5e-52 210.7 238 62.2
Lj9C389T6 Lonicera japonica HOM05D005339 ORTHO05D006561 2.5e-52 209.9 251 61.4
FAN23G1071 Fragaria x ananassa HOM05D005339 ORTHO05D006561 1.3e-51 207.6 195 73.8
EL10Ac9g21438 Beta vulgaris HOM05D005339 ORTHO05D006561 8.2e-51 204.9 200 69.5
FAN28G0542 Fragaria x ananassa HOM05D005339 ORTHO05D006561 8.2e-51 204.9 191 74.3
FAN28G2786 Fragaria x ananassa HOM05D005339 ORTHO05D006561 8.2e-51 204.9 191 74.3
Haze_02197 Corylus avellana HOM05D005339 ORTHO05D006561 3.4e-41 172.9 210 50.0
CARHR112000 Cardamine hirsuta HOM05D005339 ORTHO05D006561 1.1e-39 167.9 166 63.3
TPR.G17076 Trifolium pratense HOM05D005339 ORTHO05D006561 3.2e-39 166.4 158 72.8
FAN19G3054 Fragaria x ananassa HOM05D005339 ORTHO05D006561 8.8e-37 158.3 176 69.9
COL.COLO4_17257 Corchorus olitorius HOM05D005339 ORTHO05D003646 1.1e-36 157.9 139 82.7
VMungo0251G1261 Vigna mungo HOM05D005339 ORTHO05D006561 5.9e-33 145.6 90 87.8
Actinidia00595 Actinidia chinensis HOM05D005339 ORTHO05D006561 7.7e-33 145.2 90 86.7
MCO15G465 Micromonas commoda HOM05D005339 ORTHO05D006561 7.7e-33 145.2 204 51.5
HPP92_028582 Vanilla planifolia HOM05D005339 ORTHO05D006561 2.9e-32 143.3 164 70.7
Cre07.g341300 Chlamydomonas reinhardtii HOM05D005339 ORTHO05D006561 3.3e-28 129.8 260 38.1
Sc08g0003210 Simmondsia chinensis HOM05D005339 ORTHO05D006561 6.3e-27 125.6 96 66.7
QL11p047601 Quercus lobata HOM05D005339 ORTHO05D006561 5.7e-20 102.4 73 64.4
FAN26G3137 Fragaria x ananassa HOM05D005339 ORTHO05D006561 2.2e-19 100.5 193 51.8
Phvul.002G320400 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 2.7e-17 93.6 64 81.2
PRCOL_00006995 Prasinoderma coloniale HOM05D005339 ORTHO05D006561 4.7e-14 82.8 207 38.2
CSS0027179 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 1.5e-12 77.8 46 73.9
CSS0035622 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 5.4e-10 69.3 83 72.3


User provided reference genes

Program Settings