Gene: Solyc01g111140.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g111140.3
  • Transcript Identifier Solyc01g111140.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 89860565-89865507 : positive

Gene Family Information

  • ID HOM05D005339
  • #Genes/#Species 142/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g111140.3.1
  • uniprot A0A3Q7ETZ9
  • gene_id Solyc01g111140

Descriptions

  • Description Protein XAP5 CIRCADIAN TIMEKEEPER (AHRD V3.3 *** A0A2G2Y2K1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010099
ISO
PLAZA Integrative Orthologyregulation of photomorphogenesis AT2G21150
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT2G21150
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT2G21150
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT2G21150
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT2G21150
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT2G21150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005783
IBA
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR007005 XAP5 protein
Mapman id Description
27.1.9 Multi-process regulation.circadian clock system.light-dependent circadian clock regulator (XCT)