Gene: Potri.004G168400
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.004G168400
- Transcript Identifier Potri.004G168400.1
- Gene Type Coding gene
- Location Chr04 : 18618807-18621936 : positive
Gene Family Information
- ID HOM05D005339
- #Genes/#Species 142/98
- Phylogenetic origin
- ID ORTHO05D006561
- #Genes/#Species 141/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.004G168400.v4.1
- pacid 42795938
- synonym POPTR_0004s17570
Descriptions
- Description K13119 - protein FAM50 (FAM50, XAP5)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010099 | ISO | PLAZA Integrative Orthology | regulation of photomorphogenesis | AT2G21150 |
| GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT2G21150 |
| GO:0009873 | ISO | PLAZA Integrative Orthology | ethylene-activated signaling pathway | AT2G21150 |
| GO:0009637 | ISO | PLAZA Integrative Orthology | response to blue light | AT2G21150 |
| GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT2G21150 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT2G21150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007005 | XAP5 protein |
| Mapman id | Description |
|---|---|
| 27.1.9 | Multi-process regulation.circadian clock system.light-dependent circadian clock regulator (XCT) |