Gene: Sopen01g053200

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g053200
  • Transcript Identifier Sopen01g053200.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 108346941-108351952 : positive

Gene Family Information

  • ID HOM05D005339
  • #Genes/#Species 142/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g053200.1

Descriptions

  • Description XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized. | XAP5 CIRCADIAN TIMEKEEPER (XCT) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of circadian rhythm, response to blue light, response to red light, regulation of photomorphogenesis | LOCATED IN: nucleus | EXPRESSED IN: 8 plant structures | CONTAINS InterPro DOMAIN/s: XAP5 protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010099
ISO
PLAZA Integrative Orthologyregulation of photomorphogenesis AT2G21150
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT2G21150
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT2G21150
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT2G21150
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT2G21150
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT2G21150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007005 XAP5 protein
Mapman id Description
27.1.9 Multi-process regulation.circadian clock system.light-dependent circadian clock regulator (XCT)