Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 0.0e+00 1269.6 854 100.0
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 1.6e-166 590.9 1093 45.2
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 4.8e-163 579.3 858 47.3
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 1.4e-154 551.2 583 57.8
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 5.5e-143 512.7 306 81.7
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 9.3e-143 511.9 319 78.7
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 1.6e-142 511.1 578 54.8
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 2.1e-142 510.8 576 52.3
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 8.7e-141 505.4 585 51.8
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 9.7e-140 501.9 578 55.4
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 1.3e-139 501.5 305 81.6
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 8.2e-139 498.8 317 76.3
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 8.2e-139 498.8 924 40.7
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 2.4e-138 497.3 303 79.9
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 3.8e-136 490.0 305 76.4
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 1.9e-135 487.6 317 73.5
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 5.5e-135 486.1 306 76.8
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 7.2e-135 485.7 588 50.0
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 2.1e-134 484.2 583 49.2
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 2.7e-134 483.8 303 77.6
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 1.0e-133 481.9 301 76.7
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 2.3e-133 480.7 305 75.1
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 1.1e-132 478.4 309 74.4
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 1.1e-132 478.4 304 74.7
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 1.5e-132 478.0 339 70.5
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 2.0e-132 477.6 304 76.3
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 2.6e-132 477.2 310 73.9
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 4.4e-132 476.5 304 74.7
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 7.4e-132 475.7 311 74.3
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 7.4e-132 475.7 314 73.2
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 9.7e-132 475.3 304 74.3
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 9.7e-132 475.3 304 74.7
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 1.3e-131 474.9 310 73.5
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 1.7e-131 474.6 339 70.2
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 1.7e-131 474.6 310 72.9
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 1.7e-131 474.6 305 74.8
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 3.7e-131 473.4 302 75.5
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 6.3e-131 472.6 302 74.2
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 2.4e-130 470.7 305 73.1
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 3.1e-130 470.3 304 74.3
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 6.9e-130 469.2 326 69.0
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 9.1e-130 468.8 310 74.2
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 9.1e-130 468.8 582 48.1
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 2.0e-129 467.6 306 74.5
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 2.6e-129 467.2 318 70.8
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 5.9e-129 466.1 578 51.4
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 1.0e-128 465.3 578 51.2
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.7e-128 464.5 312 71.2
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 2.2e-128 464.2 318 69.8
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 5.0e-128 463.0 305 71.5
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 3.2e-127 460.3 316 71.8
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 3.2e-127 460.3 319 70.5
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 4.2e-127 459.9 581 47.8
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 5.5e-127 459.5 671 47.1
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 3.6e-126 456.8 305 71.8
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 4.7e-126 456.4 317 71.0
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 5.2e-125 453.0 308 71.8
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 3.3e-124 450.3 303 72.9
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 5.7e-124 449.5 327 69.1
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 9.7e-124 448.7 320 69.1
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 6.3e-123 446.0 322 68.6
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 7.7e-121 439.1 306 70.9
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 2.5e-119 434.1 354 62.4
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 2.5e-119 434.1 321 67.9
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 3.2e-119 433.7 303 69.3
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 2.7e-118 430.6 323 67.8
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 4.7e-118 429.9 276 73.9
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 1.4e-117 428.3 312 67.3
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 4.0e-117 426.8 305 66.6
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 5.2e-117 426.4 322 62.7
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 3.3e-116 423.7 321 64.5
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 3.3e-116 423.7 311 66.9
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 1.8e-114 417.9 303 66.3
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 1.8e-114 417.9 303 66.0
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 4.1e-114 416.8 303 66.3
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 5.3e-114 416.4 326 62.6
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 9.1e-114 415.6 303 65.7
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 9.1e-114 415.6 303 65.7
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 9.1e-114 415.6 303 65.7
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.6e-113 414.8 294 69.4
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 2.0e-113 414.5 302 65.9
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 4.5e-113 413.3 303 65.7
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.3e-112 411.8 303 65.0
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 1.7e-112 411.4 303 65.0
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 3.8e-112 410.2 666 45.2
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 5.0e-112 409.8 303 64.7
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 6.1e-110 402.9 319 65.2
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 5.4e-106 389.8 309 61.5
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 1.2e-105 388.7 341 60.7
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 6.1e-102 376.3 311 59.5
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 8.0e-102 375.9 319 56.1
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 3.0e-101 374.0 295 61.7
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 6.8e-101 372.9 313 60.7
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 7.5e-100 369.4 311 60.8
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 7.5e-100 369.4 311 60.8
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 2.2e-99 367.9 299 57.9
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 4.5e-97 360.1 306 58.8
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 5.0e-96 356.7 334 55.1
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 5.0e-96 356.7 325 56.9
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.1e-95 355.5 300 56.3
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 1.9e-95 354.8 332 55.7
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 5.6e-95 353.2 333 55.6
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 1.6e-94 351.7 926 33.2
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 5.2e-93 346.7 298 58.4
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.3e-88 332.0 279 61.3
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 9.5e-87 325.9 270 63.0
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 2.9e-83 314.3 306 53.3
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 2.3e-80 304.7 337 47.5
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 1.1e-79 302.4 339 45.4
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 8.1e-78 296.2 228 64.0
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 1.1e-74 285.8 340 42.4
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 1.8e-69 268.5 181 69.1
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 8.9e-69 266.2 260 56.2
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 4.1e-66 257.3 198 62.6
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 9.2e-66 256.1 179 68.2
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.0e-64 252.7 188 63.8
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 4.3e-63 247.3 190 66.8
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 3.2e-58 231.1 278 44.2
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 1.9e-50 205.3 123 78.9
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 1.1e-47 196.1 391 34.0
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 2.1e-41 175.3 298 36.6
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 1.8e-29 135.6 93 72.0
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 2.6e-28 131.7 185 41.6
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 4.6e-25 120.9 76 75.0
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 4.6e-25 120.9 70 80.0
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.5e-23 115.9 75 72.0
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 6.1e-17 94.0 62 67.7
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.3e-14 86.3 67 55.2
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 2.0e-12 79.0 61 54.1
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 1.2e-09 69.7 45 73.3
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 7.4e-07 60.5 53 56.6


User provided reference genes

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