Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 1.8e-230 802.4 435 100.0
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 4.9e-164 581.6 436 80.3
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 5.8e-125 451.8 375 74.7
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.3e-124 450.7 380 73.9
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 7.9e-122 441.4 380 72.6
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 1.4e-118 430.6 380 70.3
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 5.3e-118 428.7 386 69.9
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 2.9e-116 422.9 380 68.9
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 3.8e-116 422.5 381 69.0
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 5.0e-116 422.2 395 67.6
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 8.5e-116 421.4 380 69.7
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.1e-115 421.0 380 68.4
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 1.9e-115 420.2 381 69.0
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.5e-115 419.9 380 68.2
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.5e-115 419.9 381 68.2
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 4.2e-115 419.1 383 67.9
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 5.5e-115 418.7 381 69.0
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 9.4e-115 417.9 385 69.1
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.4e-113 414.1 380 67.1
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 2.3e-113 413.3 380 67.6
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 3.9e-113 412.5 383 67.6
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.9e-113 412.5 380 68.7
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.9e-113 412.5 380 68.7
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 5.1e-113 412.1 380 67.6
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 5.1e-113 412.1 380 67.1
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 1.5e-112 410.6 380 66.3
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.0e-112 410.2 381 67.5
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 2.5e-112 409.8 384 67.7
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 3.3e-112 409.5 380 67.6
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 4.3e-112 409.1 299 82.3
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 5.7e-112 408.7 336 72.0
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 1.3e-111 407.5 380 67.6
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 1.7e-111 407.1 383 67.1
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 2.2e-111 406.8 381 67.2
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 3.7e-111 406.0 382 65.7
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 3.7e-111 406.0 380 67.6
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 3.7e-111 406.0 381 66.7
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 4.8e-111 405.6 380 67.9
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 6.3e-111 405.2 379 67.5
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 6.3e-111 405.2 380 66.1
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 6.3e-111 405.2 380 67.9
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.1e-110 404.4 385 67.0
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 1.4e-110 404.1 380 66.6
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.4e-110 403.3 381 65.9
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 4.1e-110 402.5 380 66.8
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 1.2e-109 401.0 380 66.6
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.5e-109 400.6 375 68.0
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.6e-109 399.8 378 60.1
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.5e-109 399.1 383 66.6
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 5.9e-109 398.7 383 67.1
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 5.9e-109 398.7 382 64.9
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 7.7e-109 398.3 380 65.8
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 2.2e-108 396.7 375 67.7
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 3.8e-108 396.0 375 65.3
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.0e-108 395.6 375 66.1
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 5.0e-108 395.6 380 63.9
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 1.1e-107 394.4 378 65.9
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.4e-107 394.0 380 67.9
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.4e-107 394.0 381 66.7
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.9e-107 393.7 388 67.0
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 2.5e-107 393.3 381 67.2
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 3.2e-107 392.9 382 66.5
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 3.2e-107 392.9 394 63.7
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 4.2e-107 392.5 384 65.9
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 4.2e-107 392.5 380 66.6
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 4.2e-107 392.5 380 66.6
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 5.5e-107 392.1 381 65.4
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 7.2e-107 391.7 380 66.6
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 7.2e-107 391.7 380 66.3
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 9.4e-107 391.3 383 66.1
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 9.4e-107 391.3 380 64.5
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 1.2e-106 391.0 380 66.1
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 3.6e-106 389.4 382 66.0
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 3.6e-106 389.4 381 65.6
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 3.6e-106 389.4 381 65.6
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 4.7e-106 389.0 380 64.7
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 7.9e-106 388.3 380 66.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 7.9e-106 388.3 380 64.7
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 1.4e-105 387.5 375 65.3
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 1.4e-105 387.5 386 63.5
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.8e-105 387.1 382 64.9
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 2.3e-105 386.7 380 64.7
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 2.3e-105 386.7 389 63.8
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 3.0e-105 386.3 375 65.1
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 3.9e-105 386.0 380 65.8
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 3.9e-105 386.0 380 66.1
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 5.1e-105 385.6 383 65.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 5.1e-105 385.6 355 67.9
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.1e-104 384.4 380 64.2
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.1e-104 384.4 380 64.7
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.1e-104 384.4 382 64.4
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.1e-104 384.4 370 65.7
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.5e-104 384.0 290 69.3
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 3.3e-104 382.9 382 65.2
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 3.3e-104 382.9 418 61.0
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 4.4e-104 382.5 366 66.7
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 4.4e-104 382.5 382 64.1
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 7.4e-104 381.7 291 77.3
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 9.7e-104 381.3 358 65.1
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.3e-103 380.9 382 64.4
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.7e-103 380.6 418 60.8
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 1.7e-103 380.6 378 63.2
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.2e-103 380.2 380 64.2
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 3.7e-103 379.4 381 63.5
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.7e-103 379.4 380 63.7
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 6.3e-103 378.6 376 65.4
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 6.3e-103 378.6 376 64.4
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 8.2e-103 378.3 381 64.0
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 8.2e-103 378.3 380 63.7
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.4e-102 377.5 376 65.2
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.4e-102 377.5 351 66.4
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 1.4e-102 377.5 319 73.0
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 2.4e-102 376.7 381 63.0
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.4e-102 376.7 365 66.8
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 2.4e-102 376.7 381 64.6
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 4.1e-102 375.9 381 63.0
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 4.1e-102 375.9 380 63.2
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.3e-102 375.6 380 63.9
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 9.1e-102 374.8 328 69.5
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 9.1e-102 374.8 378 64.8
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 9.1e-102 374.8 378 64.8
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 9.1e-102 374.8 356 65.2
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 1.2e-101 374.4 378 64.8
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.2e-101 374.4 378 64.6
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.2e-101 374.4 378 64.6
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.2e-101 374.4 356 65.2
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.5e-101 374.0 296 77.0
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.0e-100 371.3 285 77.9
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.3e-100 370.9 376 63.0
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 3.8e-100 369.4 377 63.1
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 1.6e-98 364.0 356 65.4
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.1e-98 363.6 356 65.2
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 8.0e-98 361.7 355 65.4
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 1.4e-97 360.9 380 63.2
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 6.7e-97 358.6 304 70.4
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.1e-96 357.8 369 62.1
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 4.4e-96 355.9 361 62.9
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 9.1e-94 348.2 293 70.6
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.2e-93 347.8 355 62.3
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.3e-92 344.4 258 82.2
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 1.9e-91 340.5 356 62.9
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 4.2e-91 339.3 381 53.3
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.7e-90 336.7 262 77.1
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 5.2e-89 332.4 395 60.3
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 6.8e-89 332.0 384 59.4
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 6.8e-89 332.0 262 77.1
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 3.6e-82 309.7 380 55.8
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 3.6e-82 309.7 380 55.8
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 4.7e-82 309.3 282 65.2
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.3e-79 301.2 413 53.5
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 2.8e-79 300.1 285 61.4
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 1.2e-77 294.7 269 72.1
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.9e-75 287.3 332 55.1
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 2.8e-74 283.5 281 60.5
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 3.6e-74 283.1 283 55.1
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 2.0e-72 277.3 307 62.2
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 4.9e-71 272.7 281 53.4
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 3.5e-69 266.5 257 70.8
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 4.6e-69 266.2 227 73.6
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 8.6e-68 261.9 316 60.1
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 3.2e-54 216.9 180 65.0
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 6.0e-53 212.6 291 46.0
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 5.1e-52 209.5 290 41.4
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 4.0e-49 199.9 156 67.9
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.1e-46 191.8 249 59.4
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 1.4e-46 191.4 180 59.4
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.6e-45 186.4 155 63.9
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 8.9e-41 172.2 235 57.9
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 7.8e-37 159.1 168 57.7
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.8e-34 150.6 293 38.6
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 4.4e-32 143.3 118 66.1
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 8.4e-31 139.0 86 77.9
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 1.9e-30 137.9 85 77.6
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 5.4e-30 136.3 108 74.1
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 2.9e-23 114.0 72 80.6
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 4.8e-18 96.7 164 50.6
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.4e-17 95.1 107 67.3
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 6.9e-17 92.8 163 48.5
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 2.9e-15 87.4 122 48.4
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 3.8e-15 87.0 83 77.1
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 3.7e-10 70.5 93 43.0
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 1.9e-06 58.2 69 39.1


User provided reference genes

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