Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 2.7e-169 598.6 306 100.0
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 1.7e-142 509.6 312 84.0
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.2e-142 509.2 345 79.4
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.1e-138 496.9 312 81.1
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.2e-137 493.4 312 80.8
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.6e-137 493.0 312 82.1
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 5.2e-136 488.0 389 70.4
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 1.2e-135 486.9 312 79.2
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 9.8e-135 483.8 312 79.8
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 1.3e-134 483.4 315 78.4
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 1.3e-134 483.4 309 79.0
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-134 483.0 310 78.7
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 2.2e-134 482.6 312 78.2
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 2.2e-134 482.6 315 77.1
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 2.2e-134 482.6 309 79.3
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 2.8e-134 482.3 312 79.8
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 3.7e-134 481.9 311 77.5
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 4.8e-134 481.5 312 78.2
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 6.3e-134 481.1 310 78.4
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 6.3e-134 481.1 312 78.2
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 6.3e-134 481.1 312 78.2
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 1.1e-133 480.3 315 78.4
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 1.4e-133 479.9 311 77.8
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.4e-133 479.9 312 77.6
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.8e-133 479.6 313 78.0
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.8e-133 479.6 313 77.3
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 1.8e-133 479.6 313 77.6
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 1.8e-133 479.6 317 78.5
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.4e-133 479.2 313 77.6
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 2.4e-133 479.2 311 77.8
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 2.4e-133 479.2 315 76.5
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 2.4e-133 479.2 311 78.1
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 3.1e-133 478.8 313 77.6
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 3.1e-133 478.8 312 77.6
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 4.1e-133 478.4 311 77.5
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 4.1e-133 478.4 311 76.8
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 5.4e-133 478.0 312 77.6
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 5.4e-133 478.0 312 77.9
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 5.4e-133 478.0 313 77.3
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 7.0e-133 477.6 314 76.4
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 7.0e-133 477.6 315 78.1
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.2e-132 476.9 313 77.3
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.2e-132 476.9 312 77.2
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 1.6e-132 476.5 312 78.2
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 1.6e-132 476.5 315 77.1
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 2.0e-132 476.1 313 77.0
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 2.0e-132 476.1 310 76.8
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 2.7e-132 475.7 312 78.8
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 3.5e-132 475.3 310 77.7
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 3.5e-132 475.3 312 76.6
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 4.5e-132 474.9 312 77.6
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 4.5e-132 474.9 313 77.0
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 5.9e-132 474.6 309 77.7
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 5.9e-132 474.6 315 77.8
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 5.9e-132 474.6 312 76.9
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 5.9e-132 474.6 311 77.8
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 5.9e-132 474.6 324 78.7
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 7.7e-132 474.2 313 77.6
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 7.7e-132 474.2 312 77.9
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 7.7e-132 474.2 311 77.2
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 7.7e-132 474.2 312 76.0
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 1.0e-131 473.8 313 77.0
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.3e-131 473.4 312 76.9
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 1.3e-131 473.4 311 77.8
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.7e-131 473.0 311 76.8
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.7e-131 473.0 311 76.8
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 1.7e-131 473.0 312 76.9
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 2.9e-131 472.2 313 77.0
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 3.8e-131 471.9 311 77.5
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 6.6e-131 471.1 312 77.2
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 8.6e-131 470.7 313 76.7
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 8.6e-131 470.7 312 76.6
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 8.6e-131 470.7 312 76.6
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 1.1e-130 470.3 312 77.2
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.5e-130 469.9 309 76.7
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.5e-130 469.9 309 76.7
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 1.5e-130 469.9 311 76.8
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 1.5e-130 469.9 312 76.6
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 1.9e-130 469.5 311 76.2
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 1.9e-130 469.5 310 76.5
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.5e-130 469.2 312 76.9
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 4.2e-130 468.4 320 74.1
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 4.2e-130 468.4 312 76.9
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 4.2e-130 468.4 312 76.6
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 5.5e-130 468.0 313 76.4
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 9.5e-130 467.2 315 75.9
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 9.5e-130 467.2 333 72.4
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 1.6e-129 466.5 311 75.9
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.1e-129 466.1 312 76.3
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 2.1e-129 466.1 312 76.3
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 3.6e-129 465.3 299 78.9
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 4.7e-129 464.9 309 76.1
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 8.0e-129 464.2 315 75.2
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.0e-128 463.8 315 76.2
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 1.8e-128 463.0 317 75.7
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 2.3e-128 462.6 313 75.7
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.3e-128 462.6 312 75.0
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 5.2e-128 461.5 313 75.4
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 6.8e-128 461.1 313 75.1
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 7.5e-127 457.6 293 79.9
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 9.8e-127 457.2 296 79.4
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 4.1e-125 451.8 294 78.9
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 9.2e-125 450.7 303 78.2
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 1.2e-124 450.3 296 77.4
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 2.0e-124 449.5 293 77.5
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 3.5e-124 448.7 312 74.4
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 3.5e-124 448.7 294 78.6
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 4.5e-124 448.4 315 74.0
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 1.0e-123 447.2 296 75.7
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 1.7e-123 446.4 296 77.0
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 3.8e-123 445.3 311 74.3
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 2.5e-122 442.6 293 76.5
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 7.3e-122 441.0 280 81.4
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 9.5e-122 440.7 293 77.5
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.2e-121 440.3 293 77.1
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 8.0e-121 437.6 291 78.0
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 2.3e-120 436.0 300 74.7
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 3.1e-120 435.6 295 75.9
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 6.8e-120 434.5 317 72.9
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 6.8e-120 434.5 317 72.9
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 2.0e-119 433.0 289 78.2
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 6.4e-118 427.9 312 71.2
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.0e-115 420.6 276 77.5
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.7e-115 419.9 276 77.9
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.7e-115 419.9 341 68.0
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 3.9e-115 418.7 281 78.6
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 4.3e-114 415.2 294 71.8
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 9.5e-114 414.1 312 69.9
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 1.4e-112 410.2 348 63.8
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 1.5e-111 406.8 309 66.7
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 1.3e-110 403.7 261 78.9
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 1.4e-109 400.2 266 78.9
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.2e-108 397.1 309 64.1
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 1.6e-108 396.7 268 76.5
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 1.0e-107 394.0 302 69.2
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.7e-107 393.3 420 57.6
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 2.3e-107 392.9 261 78.2
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 6.6e-99 364.8 288 68.8
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 1.4e-96 357.1 243 75.3
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 3.1e-96 355.9 308 59.7
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 9.3e-85 317.8 221 73.8
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 6.0e-84 315.1 298 59.7
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.0e-83 314.3 421 47.7
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 1.7e-83 313.5 214 74.8
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 1.1e-82 310.8 290 59.3
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 4.6e-76 288.9 207 71.5
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 3.3e-74 282.7 290 57.6
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 5.1e-67 258.8 172 73.3
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 9.6e-66 254.6 270 54.8
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 1.3e-57 227.6 298 42.6
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.8e-57 225.7 221 59.7
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 2.0e-42 177.2 200 54.0
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 1.2e-39 167.9 144 65.3
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 1.2e-39 167.9 144 65.3
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 5.2e-35 152.5 142 59.2
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.1e-32 144.8 114 68.4
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 5.4e-24 115.9 88 65.9
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 5.4e-24 115.9 99 62.6
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 5.9e-23 112.5 72 68.1
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-21 107.5 88 63.6
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-21 107.5 88 63.6
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 1.8e-19 100.9 64 75.0
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 2.0e-15 87.4 51 76.5
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 1.1e-13 81.6 46 80.4
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 8.0e-12 75.5 45 77.8
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.2e-09 67.4 109 44.0
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.2e-09 67.4 109 44.0
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.8e-08 64.3 39 82.1
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 7.0e-08 62.4 41 65.9
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 2.7e-07 60.5 34 88.2


User provided reference genes

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