Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0196611 Rosa chinensis HOM05D005196 ORTHO05D006107 2.8e-126 455.3 231 100.0
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 9.7e-111 403.7 231 89.2
FvH4_5g03170 Fragaria vesca HOM05D005196 ORTHO05D006107 4.8e-110 401.4 231 89.6
FAN13G1103 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.1e-109 400.2 231 89.6
FAN04G1400 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.4e-109 399.8 231 89.2
MD14G1111600 Malus domestica HOM05D005196 ORTHO05D006107 2.9e-99 365.5 240 82.5
Prupe.5G106300 Prunus persica HOM05D005196 ORTHO05D006107 5.5e-98 361.3 240 80.0
FAN18G0698 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.2e-94 349.4 185 93.0
MD06G1090700 Malus domestica HOM05D005196 ORTHO05D006107 2.4e-93 345.9 241 79.3
Haze_08760 Corylus avellana HOM05D005196 ORTHO05D006107 1.7e-91 339.7 231 75.8
QL12p031809 Quercus lobata HOM05D005196 ORTHO05D006107 3.8e-91 338.6 195 84.6
CANSAT21G0568 Cannabis sativa HOM05D005196 ORTHO05D006107 5.0e-91 338.2 246 75.2
MSTRG.11956 Avicennia marina HOM05D005196 ORTHO05D006107 6.5e-91 337.8 200 83.0
LjContig00312_ERROPOS870357g0014232 Lotus japonicus HOM05D005196 ORTHO05D006107 8.5e-91 337.4 238 74.4
Potri.001G099300 Populus trichocarpa HOM05D005196 ORTHO05D006107 1.9e-90 336.3 188 86.2
GSVIVG01019415001 Vitis vinifera HOM05D005196 ORTHO05D006107 1.9e-90 336.3 184 88.0
Lsat_1_v5_gn_6_84980 Lactuca sativa HOM05D005196 ORTHO05D006107 5.5e-90 334.7 212 78.8
Migut.A00721 Erythranthe guttata HOM05D005196 ORTHO05D006107 1.6e-89 333.2 198 80.8
SGA_v2.0_scaffold111G31472 Striga asiatica HOM05D005196 ORTHO05D006107 2.1e-89 332.8 203 80.3
Gohir.D03G078300 Gossypium hirsutum HOM05D005196 ORTHO05D006107 3.6e-89 332.0 181 89.0
Gorai.003G085800 Gossypium raimondii HOM05D005196 ORTHO05D006107 3.6e-89 332.0 181 89.0
PGR031G3114 Punica granatum HOM05D005196 ORTHO05D006107 4.7e-89 331.6 236 73.3
Thecc.03G286300 Theobroma cacao HOM05D005196 ORTHO05D006107 6.1e-89 331.3 177 89.8
TAR636G2140 Trochodendron aralioides HOM05D005196 ORTHO05D006107 6.1e-89 331.3 181 87.8
Cpa.g.sc631.3 Carica papaya HOM05D005196 ORTHO05D006107 8.0e-89 330.9 229 76.0
Duzib205G0943 Durio zibethinus HOM05D005196 ORTHO05D006107 1.4e-88 330.1 177 89.3
Potri.003G132400 Populus trichocarpa HOM05D005196 ORTHO05D006107 1.8e-88 329.7 227 75.8
CSS0021900 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 2.3e-88 329.3 228 74.1
Duzib068G0196 Durio zibethinus HOM05D005196 ORTHO05D006107 2.3e-88 329.3 179 88.8
AT1G63970 Arabidopsis thaliana HOM05D005196 ORTHO05D006107 3.0e-88 328.9 225 73.8
Hma1.2p1_0377F.1_g139550 Hydrangea macrophylla HOM05D005196 ORTHO05D006107 3.0e-88 328.9 206 80.1
Solyc08g081570.3 Solanum lycopersicum HOM05D005196 ORTHO05D006107 3.0e-88 328.9 203 78.3
COL.COLO4_08364 Corchorus olitorius HOM05D005196 ORTHO05D006107 4.0e-88 328.6 179 87.7
Gohir.A02G105500 Gossypium hirsutum HOM05D005196 ORTHO05D006107 4.0e-88 328.6 206 80.1
HanXRQChr03g0085971 Helianthus annuus HOM05D005196 ORTHO05D006107 4.0e-88 328.6 214 78.0
AL2G11140 Arabidopsis lyrata HOM05D005196 ORTHO05D006107 5.2e-88 328.2 226 73.5
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 5.2e-88 328.2 198 81.8
Cfa012239 Carpinus fangiana HOM05D005196 ORTHO05D006107 6.8e-88 327.8 180 87.8
MELO3C016339.2 Cucumis melo HOM05D005196 ORTHO05D006107 8.8e-88 327.4 234 74.4
CsaV3_4G006100 Cucumis sativus L. HOM05D005196 ORTHO05D006107 8.8e-88 327.4 237 74.7
Nn1g01669 Nelumbo nucifera HOM05D005196 ORTHO05D006107 8.8e-88 327.4 243 73.3
Sp2g00720 Schrenkiella parvula HOM05D005196 ORTHO05D006107 8.8e-88 327.4 188 84.6
arahy.Tifrunner.gnm1.ann1.RG9U10 Arachis hypogaea HOM05D005196 ORTHO05D006107 1.5e-87 326.6 219 75.3
Aqoxy7G00203 Aquilegia oxysepala HOM05D005196 ORTHO05D006107 2.0e-87 326.2 227 74.0
Cc08_g15230 Coffea canephora HOM05D005196 ORTHO05D006107 2.0e-87 326.2 243 71.6
Sabra03G0094900 Salix brachista HOM05D005196 ORTHO05D006107 2.0e-87 326.2 227 76.7
Sed0013368 Sechium edule HOM05D005196 ORTHO05D006107 2.0e-87 326.2 222 75.7
CAN.G532.37 Capsicum annuum HOM05D005196 ORTHO05D006107 3.4e-87 325.5 227 74.0
Glyma.11G021400 Glycine max HOM05D005196 ORTHO05D006107 3.4e-87 325.5 237 70.9
Peaxi162Scf00074g01724 Petunia axillaris HOM05D005196 ORTHO05D006107 4.4e-87 325.1 180 85.0
Medtr5g010010 Medicago truncatula HOM05D005196 ORTHO05D006107 5.7e-87 324.7 241 70.5
Nitab4.5_0007906g0030 Nicotiana tabacum HOM05D005196 ORTHO05D006107 5.7e-87 324.7 231 70.6
CiPaw.11G130000 Carya illinoinensis HOM05D005196 ORTHO05D006107 7.5e-87 324.3 235 73.2
Aa31LG2G1060 Aethionema arabicum HOM05D005196 ORTHO05D006107 1.3e-86 323.6 234 73.9
CARHR047010 Cardamine hirsuta HOM05D005196 ORTHO05D006107 1.3e-86 323.6 180 85.0
Sopen08g029880 Solanum pennellii HOM05D005196 ORTHO05D006107 1.3e-86 323.6 241 68.5
PGSC0003DMG400012185 Solanum tuberosum HOM05D005196 ORTHO05D006107 1.3e-86 323.6 201 78.1
Actinidia10607 Actinidia chinensis HOM05D005196 ORTHO05D006107 1.7e-86 323.2 196 81.1
Manes.02G017610 Manihot esculenta HOM05D005196 ORTHO05D006107 1.7e-86 323.2 232 72.4
Rhsim02G0235500 Rhododendron simsii HOM05D005196 ORTHO05D006107 1.7e-86 323.2 228 73.2
ClCG07G007880 Citrullus lanatus HOM05D005196 ORTHO05D006107 2.2e-86 322.8 238 71.8
Eucgr.E00780 Eucalyptus grandis HOM05D005196 ORTHO05D006107 2.2e-86 322.8 229 73.4
THA.LOC104823600 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 2.2e-86 322.8 233 73.0
Sabra01G0074500 Salix brachista HOM05D005196 ORTHO05D006107 2.8e-86 322.4 188 82.4
Gorai.004G137800 Gossypium raimondii HOM05D005196 ORTHO05D006107 3.7e-86 322.0 181 85.1
BcaB07g31533 Brassica carinata HOM05D005196 ORTHO05D006107 4.8e-86 321.6 188 83.0
Carub.0002s0087 Capsella rubella HOM05D005196 ORTHO05D006107 4.8e-86 321.6 233 71.7
DCAR_005572 Daucus carota HOM05D005196 ORTHO05D006107 4.8e-86 321.6 183 84.2
CiPaw.12G089400 Carya illinoinensis HOM05D005196 ORTHO05D006107 6.3e-86 321.2 203 79.3
Hund11434 Selenicereus undatus HOM05D005196 ORTHO05D006107 6.3e-86 321.2 227 72.7
A09p14050 Brassica napus HOM05D005196 ORTHO05D006107 8.3e-86 320.9 181 85.1
BraA09t37052Z Brassica rapa HOM05D005196 ORTHO05D006107 8.3e-86 320.9 181 85.1
Lj2A178G47 Lonicera japonica HOM05D005196 ORTHO05D006107 8.3e-86 320.9 243 70.8
Ciclev10021991m.g Citrus clementina HOM05D005196 ORTHO05D006107 1.1e-85 320.5 214 76.2
BcaB07g31421 Brassica carinata HOM05D005196 ORTHO05D006107 1.4e-85 320.1 241 70.5
MSTRG.13860 Avicennia marina HOM05D005196 ORTHO05D006107 1.8e-85 319.7 194 77.8
Nitab4.5_0003015g0100 Nicotiana tabacum HOM05D005196 ORTHO05D006107 1.8e-85 319.7 232 71.1
PSO478G4030 Papaver somniferum HOM05D005196 ORTHO05D006107 1.8e-85 319.7 174 88.5
PSO782G4831 Papaver somniferum HOM05D005196 ORTHO05D006107 1.8e-85 319.7 174 88.5
THA.LOC104809368 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 1.8e-85 319.7 237 70.9
C09p16940 Brassica napus HOM05D005196 ORTHO05D006107 2.4e-85 319.3 183 85.2
A09p15170 Brassica napus HOM05D005196 ORTHO05D006107 5.4e-85 318.2 237 72.2
Ca_24538_v3 Cicer arietinum L. HOM05D005196 ORTHO05D006107 5.4e-85 318.2 177 84.2
Phvul.002G159900 Phaseolus vulgaris HOM05D005196 ORTHO05D006107 5.4e-85 318.2 234 71.4
BraA09t37159Z Brassica rapa HOM05D005196 ORTHO05D006107 7.0e-85 317.8 237 71.7
BcaC04g22662 Brassica carinata HOM05D005196 ORTHO05D006107 2.0e-84 316.2 183 85.2
ATR0661G112 Amborella trichopoda HOM05D005196 ORTHO05D006107 3.5e-84 315.5 177 85.9
BolC9t54591H Brassica oleracea HOM05D005196 ORTHO05D006107 3.5e-84 315.5 181 84.0
SGA_v2.0_scaffold144G35903 Striga asiatica HOM05D005196 ORTHO05D006107 3.5e-84 315.5 188 80.9
Gohir.D08G134600 Gossypium hirsutum HOM05D005196 ORTHO05D006107 4.5e-84 315.1 188 81.9
AUR62010748 Chenopodium quinoa HOM05D005196 ORTHO05D006107 5.9e-84 314.7 168 87.5
TWI81G1086 Tripterygium wilfordii HOM05D005196 ORTHO05D006107 5.9e-84 314.7 204 77.0
C09p18370 Brassica napus HOM05D005196 ORTHO05D006107 7.7e-84 314.3 233 71.2
BolC9t54730H Brassica oleracea HOM05D005196 ORTHO05D006107 7.7e-84 314.3 233 71.2
unitig_37.g12237 Utricularia gibba HOM05D005196 ORTHO05D006107 1.0e-83 313.9 181 82.9
BcaC04g22518 Brassica carinata HOM05D005196 ORTHO05D006107 1.3e-83 313.5 232 71.1
Ah.12g051910 Amaranthus hybridus HOM05D005196 ORTHO05D006107 1.7e-83 313.2 222 69.8
HPP92_025411 Vanilla planifolia HOM05D005196 ORTHO05D006107 3.8e-83 312.0 213 71.8
Lalb_Chr09g0320831 Lupinus albus HOM05D005196 ORTHO05D006107 5.0e-83 311.6 232 71.1
Oeu042360.2 Olea europaea HOM05D005196 ORTHO05D006107 6.5e-83 311.2 256 65.2
SMO118G0129 Selaginella moellendorffii HOM05D005196 ORTHO05D006107 8.6e-83 310.8 183 79.8
Os02g0680600 Oryza sativa ssp. japonica HOM05D005196 ORTHO05D006107 1.2e-81 307.0 229 70.7
ECA240G2051 Erigeron canadensis HOM05D000662 ORTHO05D000597 1.8e-80 303.1 199 76.4
Sc01g0009830 Simmondsia chinensis HOM05D005196 ORTHO05D006107 2.3e-80 302.8 220 70.5
Pp3c3_18960 Physcomitrium patens HOM05D005196 ORTHO05D006107 8.9e-80 300.8 180 80.0
SEGI_33828 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 3.4e-79 298.9 168 82.7
arahy.Tifrunner.gnm1.ann1.072U0I Arachis hypogaea HOM05D005196 ORTHO05D006107 8.3e-78 294.3 237 67.1
Mapoly0107s0035 Marchantia polymorpha HOM05D005196 ORTHO05D006107 4.1e-77 292.0 232 66.4
Eucgr.L03318 Eucalyptus grandis HOM05D005196 ORTHO05D006107 1.5e-74 283.5 207 70.5
CBR_g41628 Chara braunii HOM05D005196 ORTHO05D006107 6.1e-73 278.1 223 63.2
Dinv37598 Davidia involucrata HOM05D005196 ORTHO05D006107 2.3e-72 276.2 150 86.0
EL10Ac5g12833 Beta vulgaris HOM05D005196 ORTHO05D006107 6.8e-72 274.6 282 57.1
vmacro11408 Vaccinium macrocarpon HOM05D005196 ORTHO05D006107 2.2e-70 269.6 203 70.4
Cre12.g503550 Chlamydomonas reinhardtii HOM05D005196 ORTHO05D006107 2.4e-69 266.2 169 72.8
TPR.G6615 Trifolium pratense HOM05D005196 ORTHO05D006107 2.3e-67 259.6 234 61.5
PRCOL_00001316 Prasinoderma coloniale HOM05D005196 ORTHO05D006107 8.6e-67 257.7 159 71.1
SEGI_11641 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 1.9e-66 256.5 244 60.2
Ah.07g196720 Amaranthus hybridus HOM05D005196 ORTHO05D006107 2.5e-66 256.1 223 62.3
Actinidia28347 Actinidia chinensis HOM05D005196 ORTHO05D006107 6.8e-64 248.1 187 67.9
MCO02G159 Micromonas commoda HOM05D005196 ORTHO05D006107 7.5e-63 244.6 165 68.5
Atru.chr9.2118 Acer truncatum HOM05D005196 ORTHO05D006107 8.9e-56 221.1 122 86.9
CDE11G0665 Ceratophyllum demersum HOM05D005196 ORTHO05D006107 6.2e-49 198.4 112 82.1
TAR629G0373 Trochodendron aralioides HOM05D005196 ORTHO05D006107 4.0e-48 195.7 129 74.4
Cfa012243 Carpinus fangiana HOM05D005196 ORTHO05D006107 8.9e-48 194.5 162 64.8
Psat2g183400 Pisum sativum HOM05D005196 ORTHO05D006107 1.2e-44 184.1 160 62.5
Sed0007168 Sechium edule HOM05D005196 ORTHO05D006107 6.0e-44 181.8 112 82.1
Zm00001eb250670 Zea mays HOM05D005196 ORTHO05D006107 9.6e-42 174.5 141 62.4
Zm00001eb187250 Zea mays HOM05D005196 ORTHO05D006107 2.8e-41 172.9 155 61.9
C04p29780 Brassica napus HOM05D005196 ORTHO05D006107 6.2e-41 171.8 104 81.7
BcaC02g10359 Brassica carinata HOM05D005196 ORTHO05D006107 8.1e-41 171.4 104 80.8
Gohir.A08G114400 Gossypium hirsutum HOM05D005196 ORTHO05D006107 3.9e-35 152.5 106 71.7
Cfa012242 Carpinus fangiana HOM05D005196 ORTHO05D006107 1.2e-31 141.0 82 84.1
PSO782G0193 Papaver somniferum HOM05D005196 ORTHO05D006107 1.3e-30 137.5 124 58.9
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 2.2e-30 136.7 153 41.2
VMungo0251G1828 Vigna mungo HOM05D005196 ORTHO05D006107 2.2e-30 136.7 78 85.9
AUR62019751 Chenopodium quinoa HOM05D005196 ORTHO05D006107 7.9e-28 128.3 75 84.0
TAR629G1542 Trochodendron aralioides HOM05D005196 ORTHO05D006107 8.7e-27 124.8 71 88.7
CSS0017594 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 4.9e-22 109.0 77 74.0
MD06G1092700 Malus domestica HOM05D005196 ORTHO05D006107 6.7e-19 98.6 114 57.0
AagrBONN_evm.TU.Sc2ySwM_344.1771 Anthoceros agrestis HOM05D005196 ORTHO05D006107 4.3e-18 95.9 67 62.7
BolC4t24512H Brassica oleracea HOM05D005196 ORTHO05D006107 4.0e-16 89.4 92 55.4
Gohir.A08G114450 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.0e-15 87.0 49 81.6
MD14G1120300 Malus domestica HOM05D005196 ORTHO05D006107 4.6e-12 75.9 55 69.1
MD13G1222800 Malus domestica HOM05D005196 ORTHO05D006107 2.5e-10 70.1 47 70.2
C04p29790 Brassica napus HOM05D005196 ORTHO05D006107 3.1e-08 63.2 28 92.9
BolC4t24513H Brassica oleracea HOM05D005196 ORTHO05D006107 3.1e-08 63.2 28 92.9
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 3.4e-07 59.7 32 78.1
Medtr7g053480 Medicago truncatula HOM05D059104 ORTHO05D006107 6.5e-06 55.5 103 40.8


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