Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0183721 Rosa chinensis HOM05D005460 ORTHO05D018279 1.1e-136 490.0 246 100.0
FvH4_5g13410 Fragaria vesca HOM05D005460 ORTHO05D008059 5.5e-96 354.8 232 81.5
FAN18G2313 Fragaria x ananassa HOM05D005460 ORTHO05D008059 2.1e-95 352.8 232 81.0
FAN08G0483 Fragaria x ananassa HOM05D005460 ORTHO05D008059 1.4e-94 350.1 231 79.7
FAN13G3146 Fragaria x ananassa HOM05D005460 ORTHO05D008059 4.1e-91 338.6 226 79.6
Prupe.5G209800 Prunus persica HOM05D005460 ORTHO05D008059 2.2e-60 236.5 241 58.5
MD14G1216300 Malus domestica HOM05D005460 ORTHO05D008059 4.9e-60 235.3 240 52.5
Cfa017734 Carpinus fangiana HOM05D005460 ORTHO05D008059 4.6e-50 202.2 246 49.2
QL10p020708 Quercus lobata HOM05D005460 ORTHO05D008059 1.6e-47 193.7 248 50.8
CSS0025897 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 1.3e-41 174.1 212 49.5
Ciclev10018555m.g Citrus clementina HOM05D005460 ORTHO05D008059 1.5e-40 170.6 249 44.6
GSVIVG01008151001 Vitis vinifera HOM05D005460 ORTHO05D008059 4.7e-39 165.6 242 44.6
TAR629G3051 Trochodendron aralioides HOM05D005460 ORTHO05D008059 2.3e-38 163.3 223 44.8
Sed0020336 Sechium edule HOM05D005460 ORTHO05D008059 5.2e-38 162.2 227 42.7
MELO3C017248.2 Cucumis melo HOM05D005460 ORTHO05D008059 1.2e-37 161.0 234 43.6
CsaV3_1G003350 Cucumis sativus L. HOM05D005460 ORTHO05D008059 1.7e-36 157.1 244 41.8
Cc04_g08300 Coffea canephora HOM05D005460 ORTHO05D008059 2.9e-36 156.4 220 42.7
Rhsim08G0141800 Rhododendron simsii HOM05D005460 ORTHO05D008059 8.4e-36 154.8 238 43.7
Lj1g0006842 Lotus japonicus HOM05D005460 ORTHO05D008059 1.4e-35 154.1 221 46.6
TPR.G14357 Trifolium pratense HOM05D005460 ORTHO05D008059 4.1e-35 152.5 247 40.9
PGR031G2062 Punica granatum HOM05D005460 ORTHO05D008059 5.4e-35 152.1 238 44.1
Actinidia04798 Actinidia chinensis HOM05D005460 ORTHO05D008059 2.7e-34 149.8 224 42.9
Lsat_1_v5_gn_4_113721 Lactuca sativa HOM05D005460 ORTHO05D008059 3.5e-34 149.4 219 44.3
Cpa.g.sc3.237 Carica papaya HOM05D005460 ORTHO05D008059 6.0e-34 148.7 211 44.5
Duzib068G0250 Durio zibethinus HOM05D005460 ORTHO05D008059 1.3e-33 147.5 202 42.6
Gohir.D11G037400 Gossypium hirsutum HOM05D005460 ORTHO05D008059 2.3e-33 146.7 210 42.9
Gorai.007G040200 Gossypium raimondii HOM05D005460 ORTHO05D008059 3.9e-33 146.0 216 43.1
Thecc.03G107700 Theobroma cacao HOM05D005460 ORTHO05D008059 6.6e-33 145.2 210 42.9
Medtr2g461560 Medicago truncatula HOM05D005460 ORTHO05D008059 8.6e-33 144.8 222 44.1
Gohir.A11G034000 Gossypium hirsutum HOM05D005460 ORTHO05D008059 3.3e-32 142.9 213 41.8
HanXRQChr09g0270461 Helianthus annuus HOM05D005460 ORTHO05D008059 3.3e-32 142.9 207 46.4
Haze_18509 Corylus avellana HOM05D005460 ORTHO05D008059 9.6e-32 141.4 265 38.9
Glyma.06G206000 Glycine max HOM05D005460 ORTHO05D008059 9.6e-32 141.4 222 41.0
Nn3g17530 Nelumbo nucifera HOM05D005460 ORTHO05D008059 9.6e-32 141.4 224 40.6
arahy.Tifrunner.gnm1.ann1.LBS82T Arachis hypogaea HOM05D005460 ORTHO05D008059 4.7e-31 139.0 260 38.1
arahy.Tifrunner.gnm1.ann1.N0CKJ9 Arachis hypogaea HOM05D005460 ORTHO05D008059 4.7e-31 139.0 260 38.5
THA.LOC104818356 Tarenaya hassleriana HOM05D005460 ORTHO05D008059 8.1e-31 138.3 203 43.3
ECA232G2972 Erigeron canadensis HOM05D005460 ORTHO05D008059 1.1e-30 137.9 220 38.2
Phvul.009G203700 Phaseolus vulgaris HOM05D005460 ORTHO05D008059 1.4e-30 137.5 224 41.1
Psat1g126760 Pisum sativum HOM05D005460 ORTHO05D008059 1.8e-30 137.1 215 41.4
EL10Ac5g11188 Beta vulgaris HOM05D005460 ORTHO05D008059 3.1e-30 136.3 213 38.0
ClCG06G015450 Citrullus lanatus HOM05D005460 ORTHO05D008059 3.1e-30 136.3 235 38.7
MSTRG.22948 Avicennia marina HOM05D005460 ORTHO05D008059 5.8e-29 132.1 212 37.7
Solyc03g114780.3 Solanum lycopersicum HOM05D005460 ORTHO05D008059 9.9e-29 131.3 242 36.4
Sopen03g033860 Solanum pennellii HOM05D005460 ORTHO05D008059 1.7e-28 130.6 260 34.2
TWI60G0358 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.7e-28 130.6 213 39.4
TWI60G1488 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.7e-28 130.6 213 39.4
Dinv07972 Davidia involucrata HOM05D005460 ORTHO05D008059 7.1e-27 125.2 166 47.6
AUR62032136 Chenopodium quinoa HOM05D005460 ORTHO05D008059 1.2e-26 124.4 212 38.2
PSO478G1652 Papaver somniferum HOM05D005460 ORTHO05D008059 1.2e-26 124.4 213 40.8
VMungo1309G0936 Vigna mungo HOM05D005460 ORTHO05D008059 3.5e-26 122.9 225 37.3
Migut.I00363 Erythranthe guttata HOM05D005460 ORTHO05D008059 1.3e-25 120.9 231 36.4
Nitab4.5_0005994g0060 Nicotiana tabacum HOM05D005460 ORTHO05D008059 1.7e-25 120.6 195 40.5
CANSAT80G0202 Cannabis sativa HOM05D005460 ORTHO05D008059 2.3e-25 120.2 168 44.6
Aa31LG3G18430 Aethionema arabicum HOM05D005460 ORTHO05D008059 3.0e-25 119.8 210 38.6
BcaB08g37287 Brassica carinata HOM05D005460 ORTHO05D008059 3.0e-25 119.8 211 39.3
BraA10t44905Z Brassica rapa HOM05D005460 ORTHO05D008059 3.0e-25 119.8 203 40.4
Ah.11g047420 Amaranthus hybridus HOM05D005460 ORTHO05D018279 3.9e-25 119.4 209 36.4
MBI16_g07042_MAGBIO Magnolia biondii HOM05D005460 ORTHO05D008059 1.9e-24 117.1 264 33.3
A10p28560 Brassica napus HOM05D005460 ORTHO05D008059 2.5e-24 116.7 219 37.9
Sc04g0003880 Simmondsia chinensis HOM05D005460 ORTHO05D008059 3.3e-24 116.3 226 37.6
Potri.012G063500 Populus trichocarpa HOM05D005460 ORTHO05D008059 1.6e-23 114.0 214 38.3
Hund09954 Selenicereus undatus HOM05D005460 ORTHO05D008059 2.1e-23 113.6 212 35.4
Aqoxy3G00547_Aqoxy3G00548 Aquilegia oxysepala HOM05D005460 ORTHO05D008059 3.6e-23 112.8 211 36.5
Eucgr.K02548 Eucalyptus grandis HOM05D005460 ORTHO05D008059 3.6e-23 112.8 232 37.1
BolC9t59631H Brassica oleracea HOM05D005460 ORTHO05D008059 6.2e-23 112.1 209 36.8
COL.COLO4_27492 Corchorus olitorius HOM05D005460 ORTHO05D008059 1.1e-22 111.3 204 37.7
C09p68840 Brassica napus HOM05D005460 ORTHO05D008059 1.8e-22 110.5 203 37.4
AL6G18480 Arabidopsis lyrata HOM05D005460 ORTHO05D008059 4.0e-22 109.4 210 33.3
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 2.0e-21 107.1 219 34.7
HPP92_007735 Vanilla planifolia HOM05D005460 ORTHO05D008059 2.0e-21 107.1 204 34.8
Lj9A438G54 Lonicera japonica HOM05D005460 ORTHO05D008059 2.9e-20 103.2 176 40.3
Thhalv10012480m.g Eutrema salsugineum HOM05D005460 ORTHO05D008059 2.4e-19 100.1 209 34.4
Ca_02783_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 9.3e-19 98.2 175 38.3
AT5G08110 Arabidopsis thaliana HOM05D005460 ORTHO05D008059 2.3e-17 93.6 210 31.4
Hma1.2p1_2037F.1_g311970 Hydrangea macrophylla HOM05D005460 ORTHO05D018279 2.3e-17 93.6 150 44.0
Carub.0006s0699 Capsella rubella HOM05D005460 ORTHO05D008059 1.9e-16 90.5 202 29.7
Peaxi162Scf00017g03272 Petunia axillaris HOM05D005460 ORTHO05D008059 9.6e-16 88.2 157 36.9
SGA_v2.0_scaffold25G10948 Striga asiatica HOM05D005460 ORTHO05D008059 1.6e-15 87.4 243 29.6
Zm00001eb327130 Zea mays HOM05D005460 ORTHO05D008059 2.8e-15 86.7 116 42.2
AUR62039669 Chenopodium quinoa HOM05D005460 ORTHO05D008059 4.8e-15 85.9 176 35.8
ATR0827G052 Amborella trichopoda HOM05D005460 ORTHO05D008059 3.4e-13 79.7 253 30.0
vmacro17638 Vaccinium macrocarpon HOM05D005460 ORTHO05D018279 1.3e-12 77.8 156 37.2
SHI17426 Sapria himalayana HOM05D005460 ORTHO05D018279 4.2e-11 72.8 164 32.3
CiPaw.15G113700 Carya illinoinensis HOM05D005460 ORTHO05D008059 7.9e-10 68.6 51 64.7
Os02g0111900 Oryza sativa ssp. japonica HOM05D005460 ORTHO05D008059 1.1e-08 64.7 84 42.9
SHI17425 Sapria himalayana HOM05D005460 ORTHO05D018279 7.4e-08 62.0 47 61.7
AagrBONN_evm.TU.Sc2ySwM_344.3544 Anthoceros agrestis HOM05D005460 ORTHO05D008059 3.7e-07 59.7 78 35.9


User provided reference genes

Program Settings