Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0179491 Rosa chinensis HOM05D000207 ORTHO05D004956 2.8e-41 171.4 80 100.0
FvH4_3g22750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.2e-37 157.5 80 91.2
FvH4_7g05750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.2e-37 157.5 80 91.2
FAN16G2624 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.2e-37 157.5 80 91.2
FAN25G2312 Fragaria x ananassa HOM05D000207 ORTHO05D004956 9.3e-37 156.4 80 90.0
RcHm_v2.0_Chr5g0039761 Rosa chinensis HOM05D000207 ORTHO05D004956 9.3e-37 156.4 80 90.0
FAN16G2286 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.1e-36 155.2 80 90.0
FAN14G2395 Fragaria x ananassa HOM05D000709 ORTHO05D004956 1.3e-35 152.5 80 87.5
Prupe.4G214000 Prunus persica HOM05D000207 ORTHO05D004956 1.3e-35 152.5 80 87.5
MD11G1217300 Malus domestica HOM05D000207 ORTHO05D004956 1.8e-35 152.1 80 86.2
Actinidia39908 Actinidia chinensis HOM05D000207 ORTHO05D004956 3.9e-35 151.0 80 83.8
MD03G1200200 Malus domestica HOM05D000207 ORTHO05D004956 5.1e-35 150.6 80 85.0
FAN05G5047 Fragaria x ananassa HOM05D000709 ORTHO05D004956 8.7e-35 149.8 80 86.2
FAN09G1394 Fragaria x ananassa HOM05D000709 ORTHO05D004956 8.7e-35 149.8 80 86.2
CSS0020261 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004956 1.5e-34 149.1 80 83.8
Hma1.2p1_0992F.1_g245270 Hydrangea macrophylla HOM05D000207 ORTHO05D004956 3.3e-34 147.9 79 82.3
FAN01G2221 Fragaria x ananassa HOM05D000207 ORTHO05D004956 5.7e-34 147.1 96 76.0
CANSAT78G1427 Cannabis sativa HOM05D000207 ORTHO05D004956 7.4e-34 146.7 80 83.8
Manes.15G041801 Manihot esculenta HOM05D000207 ORTHO05D004956 7.4e-34 146.7 80 85.0
AT3G23325 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 9.7e-34 146.4 80 85.0
ClCG01G024000 Citrullus lanatus HOM05D000207 ORTHO05D004956 9.7e-34 146.4 80 83.8
ClCG05G004290 Citrullus lanatus HOM05D000207 ORTHO05D004956 9.7e-34 146.4 80 83.8
Potri.008G168000 Populus trichocarpa HOM05D000207 ORTHO05D004956 9.7e-34 146.4 80 85.0
PGR031G0434 Punica granatum HOM05D000207 ORTHO05D004956 9.7e-34 146.4 80 83.8
Actinidia11350 Actinidia chinensis HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 81.2
CARHR099290 Cardamine hirsuta HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 85.0
MELO3C007190.2 Cucumis melo HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 83.8
CsaV3_6G051140 Cucumis sativus L. HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 83.8
Thhalv10026688m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 85.0
PSO170G5684 Papaver somniferum HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 83.8
PSO198G0064 Papaver somniferum HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 83.8
PSO210G1216 Papaver somniferum HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 83.8
Sp3g20990 Schrenkiella parvula HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 85.0
TWI53G1374 Tripterygium wilfordii HOM05D000207 ORTHO05D004956 1.3e-33 146.0 80 82.5
CANSAT54G2786 Cannabis sativa HOM05D000207 ORTHO05D004956 1.6e-33 145.6 80 82.5
GSVIVG01027834001 Vitis vinifera HOM05D000207 ORTHO05D004956 1.6e-33 145.6 80 82.5
Cc03_g05640 Coffea canephora HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 82.5
Duzib235G1015 Durio zibethinus HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
Eucgr.E04319 Eucalyptus grandis HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
Gohir.A05G111600 Gossypium hirsutum HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
Gohir.D05G112000 Gossypium hirsutum HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
Gorai.009G116200 Gossypium raimondii HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
Nn1g06872 Nelumbo nucifera HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
Potri.010G070500 Populus trichocarpa HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
Hund03049 Selenicereus undatus HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 82.5
Sc25g0003710 Simmondsia chinensis HOM05D000207 ORTHO05D004956 2.2e-33 145.2 80 83.8
BcaB02g08614 Brassica carinata HOM05D000207 ORTHO05D000606 2.8e-33 144.8 80 83.8
BcaC06g35508 Brassica carinata HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 83.8
A04p07690 Brassica napus HOM05D000207 ORTHO05D000606 2.8e-33 144.8 80 83.8
A07p09140 Brassica napus HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 83.8
C04p41370 Brassica napus HOM05D000207 ORTHO05D000606 2.8e-33 144.8 80 83.8
C07p14090 Brassica napus HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 83.8
BolC7t41906H Brassica oleracea HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 83.8
BraA07t28708Z Brassica rapa HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 83.8
AUR62026315 Chenopodium quinoa HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 82.5
AUR62026510 Chenopodium quinoa HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 82.5
DCAR_024259 Daucus carota HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 82.5
Duzib043G0002 Durio zibethinus HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 82.5
Duzib160G0169 Durio zibethinus HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 82.5
Thhalv10021852m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 83.8
FAN02G2410 Fragaria x ananassa HOM05D000709 ORTHO05D004956 2.8e-33 144.8 80 83.8
Sp7g12410 Schrenkiella parvula HOM05D000207 ORTHO05D004956 2.8e-33 144.8 80 83.8
AL7G41900 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 3.7e-33 144.4 80 83.8
Carub.0003s2357 Capsella rubella HOM05D000207 ORTHO05D004956 3.7e-33 144.4 80 83.8
CDE06G2823 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 3.7e-33 144.4 80 82.5
MELO3C006416.2 Cucumis melo HOM05D000207 ORTHO05D004956 3.7e-33 144.4 80 82.5
CsaV3_3G012020 Cucumis sativus L. HOM05D000207 ORTHO05D004956 3.7e-33 144.4 80 82.5
Dinv27061 Davidia involucrata HOM05D000207 ORTHO05D004956 3.7e-33 144.4 80 82.5
Atru.chr4.2043 Acer truncatum HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
Atru.chr4.2046 Acer truncatum HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
Lalb_Chr02g0158811 Lupinus albus HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
Nitab4.5_0001379g0120 Nicotiana tabacum HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
Nitab4.5_0003038g0050 Nicotiana tabacum HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
PSO210G6748 Papaver somniferum HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 81.2
Sed0003648 Sechium edule HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
Sed0023527 Sechium edule HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
Solyc08g069080.4 Solanum lycopersicum HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
Sopen04g004070 Solanum pennellii HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
PGSC0003DMG400025301 Solanum tuberosum HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 82.5
THA.LOC104808632 Tarenaya hassleriana HOM05D000207 ORTHO05D004956 4.8e-33 144.1 80 81.2
BcaC02g09324 Brassica carinata HOM05D000207 ORTHO05D004956 6.3e-33 143.7 80 82.5
BolC4t25716H Brassica oleracea HOM05D000207 ORTHO05D004956 6.3e-33 143.7 80 82.5
Ciclev10013219m.g Citrus clementina HOM05D000207 ORTHO05D004956 6.3e-33 143.7 80 82.5
Os08g0278966 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 6.3e-33 143.7 80 81.2
Thecc.06G005500 Theobroma cacao HOM05D000207 ORTHO05D004956 6.3e-33 143.7 80 82.5
HPP92_005049 Vanilla planifolia HOM05D000207 ORTHO05D004956 6.3e-33 143.7 80 81.2
Ciclev10006856m.g Citrus clementina HOM05D000207 ORTHO05D004956 8.2e-33 143.3 80 81.2
Lj3g0015983 Lotus japonicus HOM05D000207 ORTHO05D004956 8.2e-33 143.3 80 81.2
Hund11897 Selenicereus undatus HOM05D000207 ORTHO05D004956 8.2e-33 143.3 80 81.2
Sopen08g022730 Solanum pennellii HOM05D000207 ORTHO05D004956 8.2e-33 143.3 80 81.2
AL3G37970 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 1.1e-32 142.9 80 82.5
AT4G14342 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 1.1e-32 142.9 80 82.5
COL.COLO4_26870 Corchorus olitorius HOM05D000207 ORTHO05D004956 1.1e-32 142.9 80 81.2
Solyc04g008890.3 Solanum lycopersicum HOM05D000207 ORTHO05D004956 1.1e-32 142.9 80 81.2
TAR365G0659 Trochodendron aralioides HOM05D000207 ORTHO05D004956 1.1e-32 142.9 80 80.0
Aqoxy1G01024 Aquilegia oxysepala HOM05D000207 ORTHO05D004956 1.4e-32 142.5 80 80.0
Dinv36552 Davidia involucrata HOM05D000207 ORTHO05D004956 1.4e-32 142.5 80 82.5
Glyma.08G291500 Glycine max HOM05D000207 ORTHO05D004956 1.4e-32 142.5 80 81.2
Glyma.18G132700 Glycine max HOM05D000207 ORTHO05D004956 1.4e-32 142.5 80 81.2
Lsat_1_v5_gn_6_103061 Lactuca sativa HOM05D000207 ORTHO05D004956 1.4e-32 142.5 80 80.0
Mapoly0001s0403 Marchantia polymorpha HOM05D000207 ORTHO05D004956 1.4e-32 142.5 80 82.5
Os08g0444100 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 1.4e-32 142.5 80 81.2
Ca_08207_v3 Cicer arietinum L. HOM05D000207 ORTHO05D004956 1.8e-32 142.1 80 80.0
ECA232G2626 Erigeron canadensis HOM05D000207 ORTHO05D004956 1.8e-32 142.1 80 80.0
ECA240G3918 Erigeron canadensis HOM05D000207 ORTHO05D004956 1.8e-32 142.1 80 80.0
HanXRQChr03g0091521 Helianthus annuus HOM05D000207 ORTHO05D004956 1.8e-32 142.1 80 80.0
HanXRQChr13g0421281 Helianthus annuus HOM05D000207 ORTHO05D004956 1.8e-32 142.1 80 80.0
Psat4g126040 Pisum sativum HOM05D000207 ORTHO05D004956 1.8e-32 142.1 80 80.0
Psat6g018880 Pisum sativum HOM05D000207 ORTHO05D004956 1.8e-32 142.1 80 80.0
Migut.G00508 Erythranthe guttata HOM05D000207 ORTHO05D004956 2.4e-32 141.7 80 82.5
MSTRG.21917 Avicennia marina HOM05D000207 ORTHO05D004956 3.1e-32 141.4 80 81.2
Lsat_1_v5_gn_3_117461 Lactuca sativa HOM05D000207 ORTHO05D004956 3.1e-32 141.4 80 78.8
CiPaw.02G111100 Carya illinoinensis HOM05D000207 ORTHO05D004956 6.9e-32 140.2 80 80.0
Medtr8g062750 Medicago truncatula HOM05D000207 ORTHO05D004956 1.2e-31 139.4 80 77.5
PGSC0003DMG400026872 Solanum tuberosum HOM05D000207 ORTHO05D004956 1.2e-31 139.4 81 81.5
Phvul.003G055200 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 1.5e-31 139.0 80 78.8
Migut.N00279 Erythranthe guttata HOM05D000207 ORTHO05D004956 2.0e-31 138.7 80 78.8
unitig_748.g7329 Utricularia gibba HOM05D000207 ORTHO05D000606 2.0e-31 138.7 80 80.0
vmacro15450 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.6e-31 138.3 103 66.0
Medtr3g019300 Medicago truncatula HOM05D000207 ORTHO05D004956 3.4e-31 137.9 80 77.5
Medtr3g019310 Medicago truncatula HOM05D000207 ORTHO05D004956 3.4e-31 137.9 80 77.5
SMO232G0034 Selaginella moellendorffii HOM05D000207 ORTHO05D004956 7.7e-31 136.7 79 78.5
Phvul.009G163800 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 1.0e-30 136.3 76 81.6
AagrBONN_evm.TU.Sc2ySwM_344.2015 Anthoceros agrestis HOM05D000207 ORTHO05D004956 1.7e-30 135.6 80 76.2
CBR_g8906 Chara braunii HOM05D000207 ORTHO05D004956 2.9e-30 134.8 80 76.2
MBI07_g16899_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 8.5e-30 133.3 100 67.0
FAN06G2225 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.1e-28 128.6 72 83.3
FAN03G1535 Fragaria x ananassa HOM05D000207 ORTHO05D004956 3.0e-27 124.8 64 90.6
FAN10G1241 Fragaria x ananassa HOM05D000207 ORTHO05D004956 3.0e-27 124.8 64 90.6
MCO09G487 Micromonas commoda HOM05D000207 ORTHO05D004956 1.1e-26 122.9 80 68.8
vmacro21393 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 5.7e-26 120.6 68 80.9
VMungo1127G0964 Vigna mungo HOM05D000207 ORTHO05D004956 5.7e-26 120.6 68 80.9
arahy.Tifrunner.gnm1.ann1.Q94Q39 Arachis hypogaea HOM05D000677 ORTHO05D000727 7.4e-26 120.2 67 83.6
vmacro21388 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 9.7e-26 119.8 64 84.4
Cre14.g627900 Chlamydomonas reinhardtii HOM05D000207 ORTHO05D004956 1.7e-25 119.0 78 66.7
QL06p018332 Quercus lobata HOM05D000207 ORTHO05D004956 2.2e-25 118.6 64 84.4
Sabra08G0128000 Salix brachista HOM05D000207 ORTHO05D004956 2.2e-25 118.6 64 85.9
Sabra10G0036900 Salix brachista HOM05D000207 ORTHO05D004956 2.2e-25 118.6 64 85.9
Cpa.g.c34811.1 Carica papaya HOM05D000207 ORTHO05D004956 2.8e-25 118.2 64 84.4
arahy.Tifrunner.gnm1.ann1.AU04TH Arachis hypogaea HOM05D000207 ORTHO05D004956 3.7e-25 117.9 64 84.4
arahy.Tifrunner.gnm1.ann1.DCT04E Arachis hypogaea HOM05D000207 ORTHO05D004956 3.7e-25 117.9 64 84.4
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.7e-25 117.9 64 84.4
EL10Ac3g04993 Beta vulgaris HOM05D000001 ORTHO05D000003 4.8e-25 117.5 64 82.8
Oeu005091.1 Olea europaea HOM05D000207 ORTHO05D004956 4.8e-25 117.5 64 84.4
HPP92_005064 Vanilla planifolia HOM05D000207 ORTHO05D004956 4.8e-25 117.5 64 82.8
Aa31LG9G3040 Aethionema arabicum HOM05D001185 ORTHO05D002551 6.3e-25 117.1 64 84.4
BraA04t16461Z Brassica rapa HOM05D000207 ORTHO05D000606 6.3e-25 117.1 64 84.4
PSO063G3293 Papaver somniferum HOM05D000207 ORTHO05D004956 6.3e-25 117.1 64 82.8
SalBow3G2895 Salvia bowleyana HOM05D000207 ORTHO05D004956 6.3e-25 117.1 68 80.9
PGSC0003DMG400029581 Solanum tuberosum HOM05D000207 ORTHO05D004956 6.3e-25 117.1 66 80.3
Zm00001eb176950 Zea mays HOM05D000207 ORTHO05D004956 6.3e-25 117.1 64 84.4
CiPaw.01G183100 Carya illinoinensis HOM05D000207 ORTHO05D004956 8.2e-25 116.7 64 82.8
arahy.Tifrunner.gnm1.ann1.6C1XPZ Arachis hypogaea HOM05D000207 ORTHO05D004956 1.1e-24 116.3 64 82.8
Cfa022948 Carpinus fangiana HOM05D000411 ORTHO05D004956 9.1e-24 113.2 63 81.0
PRCOL_00006150 Prasinoderma coloniale HOM05D000207 ORTHO05D004956 5.9e-23 110.5 80 62.5
vmacro12999 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 6.5e-22 107.1 64 78.1
CAN.G274.30 Capsicum annuum HOM05D000207 ORTHO05D004956 2.5e-21 105.1 58 79.3
CDE02G4280 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 3.2e-21 104.8 57 82.5
MBI16_g42515_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 4.2e-21 104.4 72 72.2
unitig_32.g11701 Utricularia gibba HOM05D000207 ORTHO05D004956 2.7e-20 101.7 89 60.7
AagrBONN_evm.TU.Sc2ySwM_369.181 Anthoceros agrestis HOM05D000207 ORTHO05D004956 6.1e-20 100.5 57 75.4
A06p07840 Brassica napus HOM05D000207 ORTHO05D004956 1.4e-19 99.4 57 80.7
MD12G1011100 Malus domestica HOM05D000207 ORTHO05D004956 2.3e-19 98.6 73 69.9
Lj4g0019776 Lotus japonicus HOM05D000207 ORTHO05D004956 2.6e-18 95.1 80 60.0
Pp3c25_1640 Physcomitrium patens HOM05D000207 ORTHO05D004956 4.4e-18 94.4 53 79.2
Lj4g0025571 Lotus japonicus HOM05D000207 ORTHO05D004956 3.7e-17 91.3 70 65.7
VMungo0251G1197 Vigna mungo HOM05D000207 ORTHO05D004956 7.0e-16 87.0 47 83.0
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.2e-14 82.0 45 80.0
A09p67600 Brassica napus HOM05D000207 ORTHO05D004956 7.2e-13 77.0 41 82.9
Gohir.1Z049411 Gossypium hirsutum HOM05D000207 ORTHO05D004956 5.2e-11 70.9 39 84.6
vmacro16885 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 3.7e-09 64.7 38 76.3
Eucgr.L00218 Eucalyptus grandis HOM05D000207 ORTHO05D004956 9.1e-08 60.1 39 71.8
Ah.14g081440 Amaranthus hybridus HOM05D000207 ORTHO05D004956 3.5e-07 58.2 37 64.9


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