Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0330651 Rosa chinensis HOM05D000366 ORTHO05D343105 1.6e-21 105.1 52 100.0
FvH4_4g15530 Fragaria vesca HOM05D000366 ORTHO05D001950 8.5e-07 56.2 41 68.3
FAN07G1064 Fragaria x ananassa HOM05D000366 ORTHO05D001950 8.5e-07 56.2 41 68.3
FAN12G3426 Fragaria x ananassa HOM05D000366 ORTHO05D001950 8.5e-07 56.2 41 68.3
FAN17G2819 Fragaria x ananassa HOM05D000366 ORTHO05D001950 8.5e-07 56.2 41 68.3
FAN22G0776 Fragaria x ananassa HOM05D000366 ORTHO05D001950 8.5e-07 56.2 41 68.3
BcaC04g20982 Brassica carinata HOM05D000366 ORTHO05D001950 1.5e-06 55.5 51 54.9
RcHm_v2.0_Chr4g0416231 Rosa chinensis HOM05D000366 ORTHO05D001950 2.5e-06 54.7 41 65.9
TAR362G0392 Trochodendron aralioides HOM05D000366 ORTHO05D000437 3.2e-06 54.3 41 65.9
FAN24G2807 Fragaria x ananassa HOM05D000366 ORTHO05D001950 4.2e-06 53.9 41 63.4
Ciclev10006140m.g Citrus clementina HOM05D000366 ORTHO05D001950 5.5e-06 53.5 41 65.9
COL.COLO4_13785 Corchorus olitorius HOM05D000366 ORTHO05D001950 5.5e-06 53.5 41 65.9
vmacro02588 Vaccinium macrocarpon HOM05D000366 ORTHO05D001950 5.5e-06 53.5 41 65.9
Actinidia00774 Actinidia chinensis HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Actinidia24903 Actinidia chinensis HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Duzib041G0380 Durio zibethinus HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Duzib093G0867 Durio zibethinus HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Duzib116G0031 Durio zibethinus HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gohir.A02G062700 Gossypium hirsutum HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gohir.A05G246400 Gossypium hirsutum HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gohir.A05G271000 Gossypium hirsutum HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gohir.A06G111300 Gossypium hirsutum HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gohir.D02G068300 Gossypium hirsutum HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gohir.D05G247900 Gossypium hirsutum HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gohir.D06G115600 Gossypium hirsutum HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gorai.005G077200 Gossypium raimondii HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gorai.009G258700 Gossypium raimondii HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gorai.009G286200 Gossypium raimondii HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Gorai.010G132100 Gossypium raimondii HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
Rhsim13G0026300 Rhododendron simsii HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 63.4
Thecc.08G159300 Theobroma cacao HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
TAR365G1022 Trochodendron aralioides HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
TAR381G0273 Trochodendron aralioides HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
TAR381G1485 Trochodendron aralioides HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
TAR625G0231 Trochodendron aralioides HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
TAR636G3482 Trochodendron aralioides HOM05D000366 ORTHO05D001950 7.2e-06 53.1 41 65.9
AL1G36330 Arabidopsis lyrata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
AL1G48470 Arabidopsis lyrata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
AL6G43430 Arabidopsis lyrata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
AT1G22780 Arabidopsis thaliana HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
AT1G34030 Arabidopsis thaliana HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
AT4G09800 Arabidopsis thaliana HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
MSTRG.21550 Avicennia marina HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 65.9
BcaB01g01428 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaB01g02775 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaB03g13683 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaB04g17908 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaB07g33025 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaC01g04701 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaC04g20984 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaC05g27776 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BcaC08g43822 Brassica carinata HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
A03p28750 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
A05p24060 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
A09p29090 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
A09p32440 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
C03p34770 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
C05p37700 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
C06p12060 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
C09p36970 Brassica napus HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BolC3t15786H Brassica oleracea HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BolC5t32513H Brassica oleracea HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BolC6t36342H Brassica oleracea HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BolC9t56527H Brassica oleracea HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BraA03t12073Z Brassica rapa HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BraA05t21286Z Brassica rapa HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BraA09t38476Z Brassica rapa HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
BraA09t38786Z Brassica rapa HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
CSS0009657 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
CSS0015789 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
CANSAT78G0447 Cannabis sativa HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
Carub.0001s2229 Capsella rubella HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
CDE02G4039 Ceratophyllum demersum HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 65.9
CDE04G1949 Ceratophyllum demersum HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 65.9
CDE05G2939 Ceratophyllum demersum HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 65.9
Sp1g29290 Schrenkiella parvula HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4
Sp6g07730 Schrenkiella parvula HOM05D000366 ORTHO05D001950 9.5e-06 52.8 41 63.4


User provided reference genes

Program Settings