Gene: vmacro02588
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro02588
- Transcript Identifier vmacro02588-RA
- Gene Type Coding gene
- Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 2856070-2858489 : positive
Gene Family Information
- ID HOM05D000366
- #Genes/#Species 1311/100
- Phylogenetic origin
- ID ORTHO05D001950
- #Genes/#Species 333/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro02588_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to RPS18A: 40S ribosomal protein S18 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation | |
| GO:0006413 | ISO | PLAZA Integrative Orthology | translational initiation | AT1G22780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G34030 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G22780 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0015935 | ISO | PLAZA Integrative Orthology | small ribosomal subunit | AT4G09800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.20 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS18 |