Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p050211 Quercus lobata HOM05D001734 ORTHO05D006943 7.4e-49 196.8 95 100.0
Actinidia18030 Actinidia chinensis HOM05D001734 ORTHO05D006943 1.6e-14 82.8 49 87.8
Dinv14134 Davidia involucrata HOM05D001734 ORTHO05D006943 1.6e-14 82.8 49 87.8
Lj5A175T98 Lonicera japonica HOM05D001734 ORTHO05D006943 1.6e-14 82.8 49 87.8
Peaxi162Scf00362g00442 Petunia axillaris HOM05D001734 ORTHO05D006943 1.6e-14 82.8 49 87.8
CSS0001027 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 2.0e-14 82.4 49 85.7
CSS0020547 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 2.0e-14 82.4 49 85.7
CAN.G588.109 Capsicum annuum HOM05D001734 ORTHO05D006943 3.5e-14 81.6 49 85.7
Hund00010 Selenicereus undatus HOM05D001734 ORTHO05D006943 3.5e-14 81.6 49 85.7
Solyc01g111870.3 Solanum lycopersicum HOM05D001734 ORTHO05D006943 3.5e-14 81.6 49 85.7
Sopen01g053910 Solanum pennellii HOM05D001734 ORTHO05D006943 3.5e-14 81.6 49 85.7
VMungo0720G2261 Vigna mungo HOM05D001734 ORTHO05D006943 3.5e-14 81.6 49 85.7
ATR0661G423 Amborella trichopoda HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Cfa005298 Carpinus fangiana HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
CiPaw.06G119600 Carya illinoinensis HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Ca_03288_v3 Cicer arietinum L. HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Glyma.10G284200 Glycine max HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Lalb_Chr06g0163781 Lupinus albus HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
MBI18_g09841_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Medtr1g113830 Medicago truncatula HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Potri.004G179000 Populus trichocarpa HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
QL11p052553 Quercus lobata HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Rhsim11G0194400 Rhododendron simsii HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Sabra04G0120500 Salix brachista HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Sc18g0006200 Simmondsia chinensis HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
TPR.G2476 Trifolium pratense HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
vmacro02297 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 4.5e-14 81.3 49 85.7
Atru.chr5.3458 Acer truncatum HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
CANSAT25G2086 Cannabis sativa HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 85.7
COL.COLO4_18014 Corchorus olitorius HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
Gohir.A12G035900 Gossypium hirsutum HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
Gohir.D12G036650 Gossypium hirsutum HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
Gorai.008G037900 Gossypium raimondii HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
Hma1.2p1_0032F.1_g019090 Hydrangea macrophylla HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
MD05G1126600 Malus domestica HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 85.7
Nitab4.5_0004557g0050 Nicotiana tabacum HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 85.7
Nitab4.5_0004867g0090 Nicotiana tabacum HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 85.7
Thecc.02G053500 Theobroma cacao HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
TWI79G0733 Tripterygium wilfordii HOM05D001734 ORTHO05D006943 5.9e-14 80.9 49 83.7
Aa31LG7G15750 Aethionema arabicum HOM05D001734 ORTHO05D006943 7.7e-14 80.5 51 76.5
EL10Ac9g21328 Beta vulgaris HOM05D001734 ORTHO05D006943 7.7e-14 80.5 49 83.7
Duzib052G0295 Durio zibethinus HOM05D001734 ORTHO05D006943 7.7e-14 80.5 49 81.6
Ah.01g023340 Amaranthus hybridus HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
Cc09_g10400 Coffea canephora HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 83.7
MELO3C013324.2 Cucumis melo HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
CsaV3_7G001280 Cucumis sativus L. HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
FvH4_2g15770 Fragaria vesca HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
FAN15G0209 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
FAN20G0548 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
FAN24G0945 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
FAN27G0836 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
Phvul.007G017000 Phaseolus vulgaris HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 83.7
RcHm_v2.0_Chr6g0279121 Rosa chinensis HOM05D001734 ORTHO05D006943 1.0e-13 80.1 49 81.6
CDE09G0008 Ceratophyllum demersum HOM05D001734 ORTHO05D006943 1.3e-13 79.7 49 81.6
AUR62010002 Chenopodium quinoa HOM05D001734 ORTHO05D006943 1.3e-13 79.7 49 81.6
ClCG02G003850 Citrullus lanatus HOM05D001734 ORTHO05D006943 1.3e-13 79.7 49 79.6
DCAR_022421 Daucus carota HOM05D001734 ORTHO05D006943 1.3e-13 79.7 49 81.6
Eucgr.I01462 Eucalyptus grandis HOM05D001734 ORTHO05D006943 1.3e-13 79.7 49 81.6
Psat6g232760 Pisum sativum HOM05D001734 ORTHO05D006943 1.3e-13 79.7 49 83.7
Prupe.8G170300 Prunus persica HOM05D001734 ORTHO05D006943 1.3e-13 79.7 49 83.7
Aqoxy5G01087 Aquilegia oxysepala HOM05D001734 ORTHO05D006943 1.7e-13 79.3 49 81.6
Ciclev10027660m.g Citrus clementina HOM05D001734 ORTHO05D006943 1.7e-13 79.3 49 83.7
Lj5g0001935 Lotus japonicus HOM05D001734 ORTHO05D006943 1.7e-13 79.3 49 83.7
Nn6g31886 Nelumbo nucifera HOM05D001734 ORTHO05D006943 1.7e-13 79.3 49 81.6
Oeu028956.2 Olea europaea HOM05D001734 ORTHO05D006943 1.7e-13 79.3 49 81.6
Aa31LG7G14750 Aethionema arabicum HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 79.6
AL7G48900 Arabidopsis lyrata HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 79.6
AT5G40820 Arabidopsis thaliana HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 79.6
Carub.0008s0072 Capsella rubella HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 79.6
CARHR115960 Cardamine hirsuta HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 79.6
Haze_02089 Corylus avellana HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 83.7
Thhalv10027615m.g Eutrema salsugineum HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 79.6
PSO170G1896 Papaver somniferum HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 83.7
PSO210G4774 Papaver somniferum HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 83.7
Sp4g00080 Schrenkiella parvula HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 79.6
Sed0017558 Sechium edule HOM05D001734 ORTHO05D006943 2.3e-13 79.0 49 77.6
AUR62012990 Chenopodium quinoa HOM05D001734 ORTHO05D006943 2.9e-13 78.6 49 79.6
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 2.9e-13 78.6 49 77.6
TAR628G1453 Trochodendron aralioides HOM05D001734 ORTHO05D006943 2.9e-13 78.6 49 81.6
HPP92_022387 Vanilla planifolia HOM05D001734 ORTHO05D006943 2.9e-13 78.6 49 79.6
BcaB06g27763 Brassica carinata HOM05D001734 ORTHO05D006943 5.0e-13 77.8 49 77.6
ECA234G4688 Erigeron canadensis HOM05D001734 ORTHO05D006943 5.0e-13 77.8 49 81.6
HanXRQChr05g0141851 Helianthus annuus HOM05D001734 ORTHO05D006943 5.0e-13 77.8 49 81.6
Lsat_1_v5_gn_3_6601 Lactuca sativa HOM05D001734 ORTHO05D006943 5.0e-13 77.8 49 81.6
SMO203G0188 Selaginella moellendorffii HOM05D001734 ORTHO05D006943 5.0e-13 77.8 49 79.6
SEGI_35062 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 6.5e-13 77.4 49 79.6
Zm00001eb228310 Zea mays HOM05D001734 ORTHO05D006943 6.5e-13 77.4 49 77.6
Atru.chr1.2616 Acer truncatum HOM05D001734 ORTHO05D006943 1.5e-12 76.3 49 77.6
CBR_g6357 Chara braunii HOM05D001734 ORTHO05D006943 1.9e-12 75.9 49 73.5
GSVIVG01023964001 Vitis vinifera HOM05D001734 ORTHO05D006943 2.5e-12 75.5 49 79.6
PGR142G2610 Punica granatum HOM05D001734 ORTHO05D006943 3.2e-12 75.1 49 79.6
C04p50230 Brassica napus HOM05D001734 ORTHO05D006943 4.2e-12 74.7 44 84.1
BolC4t26623H Brassica oleracea HOM05D001734 ORTHO05D006943 4.2e-12 74.7 44 84.1
Mapoly0026s0077 Marchantia polymorpha HOM05D001734 ORTHO05D006943 5.5e-12 74.3 49 75.5
unitig_21.g20845 Utricularia gibba HOM05D001734 ORTHO05D006943 5.5e-12 74.3 49 73.5
A04p15830 Brassica napus HOM05D001734 ORTHO05D006943 7.2e-12 73.9 44 84.1
BraA04t17214Z Brassica rapa HOM05D000482 ORTHO05D006943 7.2e-12 73.9 44 84.1
Os06g0724700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D006943 9.5e-12 73.6 49 71.4
Migut.B00045 Erythranthe guttata HOM05D001734 ORTHO05D006943 2.8e-11 72.0 49 71.4
SGA_v2.0_scaffold32G13315 Striga asiatica HOM05D001734 ORTHO05D006943 2.8e-11 72.0 49 75.5
AagrBONN_evm.TU.Sc2ySwM_340.33 Anthoceros agrestis HOM05D001734 ORTHO05D006943 3.6e-11 71.6 49 71.4
MCO16G510 Micromonas commoda HOM05D001734 ORTHO05D006943 1.8e-10 69.3 49 67.3
SGA_v2.0_scaffold6G03244 Striga asiatica HOM05D001734 ORTHO05D006943 6.8e-10 67.4 42 83.3
SMO298G0036 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 1.6e-06 56.2 49 53.1
Cre10.g467200 Chlamydomonas reinhardtii HOM05D001734 ORTHO05D006943 2.0e-06 55.8 49 57.1
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 2.7e-06 55.5 49 49.0
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 3.5e-06 55.1 49 49.0
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 5.9e-06 54.3 49 49.0
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 5.9e-06 54.3 49 49.0
Cc04_g14130 Coffea canephora HOM05D001734 ORTHO05D003483 7.8e-06 53.9 49 49.0
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 7.8e-06 53.9 50 46.0
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 7.8e-06 53.9 49 49.0


User provided reference genes

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