Gene: Cc09_g10400
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc09_g10400
- Transcript Identifier Cc09_g10400.1
- Gene Type Coding gene
- Location chr9 : 21759078-21771623 : negative
Gene Family Information
- ID HOM05D001734
- #Genes/#Species 373/100
- Phylogenetic origin
- ID ORTHO05D006943
- #Genes/#Species 136/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB Q5Z987
- UniProtKB B9S5G9
- UniProtKB Q9FKS4
- UniProtKB F6I0X3
- UniProtKB B9H1M0
- UniProtKB A2YH41
- id GSCOCG00041048001
Descriptions
- Description Serine/threonine-protein kinase ATR
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006303 | ISO | PLAZA Integrative Orthology | double-strand break repair via nonhomologous end joining | AT5G40820 |
| GO:0032204 | ISO | PLAZA Integrative Orthology | regulation of telomere maintenance | AT5G40820 |
| GO:0031347 | ISO | PLAZA Integrative Orthology | regulation of defense response | AT5G40820 |
| GO:0010332 | ISO | PLAZA Integrative Orthology | response to gamma radiation | AT5G40820 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT5G40820 |
| GO:0032504 | ISO | PLAZA Integrative Orthology | multicellular organism reproduction | AT5G40820 |
| GO:0043247 | ISO | PLAZA Integrative Orthology | telomere maintenance in response to DNA damage | AT5G40820 |
| GO:0006974 | ISO | PLAZA Homology (enrichment) | cellular response to DNA damage stimulus | HOM05D001734 |
| GO:0007004 | ISO | PLAZA Integrative Orthology | telomere maintenance via telomerase | AT5G40820 |
| GO:0006282 | ISO | PLAZA Integrative Orthology | regulation of DNA repair | AT5G40820 |
| GO:0033044 | ISO | PLAZA Integrative Orthology | regulation of chromosome organization | AT5G40820 |
| GO:0010044 | ISO | PLAZA Integrative Orthology | response to aluminum ion | AT5G40820 |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT5G40820 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016301 | IEA | InterPro | kinase activity | |
| GO:0004674 | IEA | InterPro | protein serine/threonine kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G40820 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR016024 | Armadillo-type fold |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR012993 | UME domain |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain |
| IPR003152 | FATC domain |
| IPR036940 | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily |
| IPR003151 | PIK-related kinase, FAT |
| Mapman id | Description |
|---|---|
| 14.1.3.1.1 | DNA damage response.DNA damage sensing and signalling.DNA damage checkpoint activation.ATR-ATRIP DNA damage sensor complex.kinase component ATR |