Gene: Sopen01g053910

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g053910
  • Transcript Identifier Sopen01g053910.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 108850310-108866269 : negative

Gene Family Information

  • ID HOM05D001734
  • #Genes/#Species 373/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g053910.1

Descriptions

  • Description Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al. | Ataxia telangiectasia-mutated and RAD3-related (ATR) | FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor | INVOLVED IN: in 9 processes | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic , UME , Protein kinase-like domain , PIK-related kinase, FAT , Armadillo-type fold , PIK-related kinase , Phosphatidylinositol 3/4-kinase, conserved site , PIK-related kinase, FATC | BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006303
ISO
PLAZA Integrative Orthologydouble-strand break repair via nonhomologous end joining AT5G40820
GO:0032204
ISO
PLAZA Integrative Orthologyregulation of telomere maintenance AT5G40820
GO:0031347
ISO
PLAZA Integrative Orthologyregulation of defense response AT5G40820
GO:0010332
ISO
PLAZA Integrative Orthologyresponse to gamma radiation AT5G40820
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT5G40820
GO:0032504
ISO
PLAZA Integrative Orthologymulticellular organism reproduction AT5G40820
GO:0043247
ISO
PLAZA Integrative Orthologytelomere maintenance in response to DNA damage AT5G40820
GO:0006974
ISO
PLAZA Homology (enrichment)cellular response to DNA damage stimulus HOM05D001734
GO:0007004
ISO
PLAZA Integrative Orthologytelomere maintenance via telomerase AT5G40820
GO:0006282
ISO
PLAZA Integrative Orthologyregulation of DNA repair AT5G40820
GO:0033044
ISO
PLAZA Integrative Orthologyregulation of chromosome organization AT5G40820
GO:0010044
ISO
PLAZA Integrative Orthologyresponse to aluminum ion AT5G40820
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G40820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004674
IEA
InterProprotein serine/threonine kinase activity
GO:0016301
IEA
InterProkinase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G40820

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012993 UME domain
IPR011009 Protein kinase-like domain superfamily
IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain
IPR003151 PIK-related kinase, FAT
IPR003152 FATC domain
IPR016024 Armadillo-type fold
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR036940 Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily
IPR011989 Armadillo-like helical
Mapman id Description
14.1.3.1.1 DNA damage response.DNA damage sensing and signalling.DNA damage checkpoint activation.ATR-ATRIP DNA damage sensor complex.kinase component ATR