Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 1.6e-80 302.8 159 100.0
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.2e-48 196.8 139 76.3
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 4.7e-48 194.9 131 80.2
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 1.4e-47 193.4 131 80.2
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 2.3e-39 166.0 131 70.2
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 6.8e-39 164.5 131 66.4
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 4.4e-38 161.8 131 64.9
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 5.8e-38 161.4 131 63.4
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 5.8e-38 161.4 131 63.4
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 7.5e-38 161.0 131 64.9
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 9.8e-38 160.6 131 64.9
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 4.9e-37 158.3 131 62.6
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 4.9e-37 158.3 135 64.4
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 8.3e-37 157.5 132 62.9
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 9.2e-36 154.1 131 64.1
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 9.2e-36 154.1 131 64.1
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 1.2e-35 153.7 132 59.8
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.6e-35 153.3 129 62.0
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 2.1e-35 152.9 132 60.6
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 7.8e-35 151.0 131 61.1
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.3e-34 150.2 131 60.3
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 2.3e-34 149.4 131 61.1
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 3.0e-34 149.1 132 57.6
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 3.9e-34 148.7 131 62.6
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.5e-33 146.7 131 61.1
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 5.6e-33 144.8 131 61.1
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 7.3e-33 144.4 131 58.8
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.6e-32 143.3 131 58.0
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.6e-32 143.3 134 56.7
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 3.6e-32 142.1 131 57.3
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 1.1e-31 140.6 150 52.7
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.8e-31 139.8 127 55.9
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 1.8e-31 139.8 131 57.3
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 2.3e-31 139.4 134 56.7
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 3.1e-31 139.0 131 57.3
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 4.0e-31 138.7 131 58.8
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 6.8e-31 137.9 156 49.4
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 6.8e-31 137.9 156 49.4
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 6.8e-31 137.9 156 49.4
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 6.8e-31 137.9 131 56.5
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 1.2e-30 137.1 156 49.4
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 1.5e-30 136.7 132 56.8
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.5e-30 136.7 133 51.9
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 2.0e-30 136.3 131 52.7
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 3.4e-30 135.6 138 54.3
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 4.4e-30 135.2 131 54.2
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 4.4e-30 135.2 134 57.5
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 9.9e-30 134.0 131 53.4
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.7e-29 133.3 132 53.8
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 3.7e-29 132.1 131 57.3
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 4.9e-29 131.7 131 54.2
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 8.4e-29 131.0 163 47.2
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.1e-28 130.6 158 48.7
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 1.9e-28 129.8 131 53.4
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.4e-28 129.4 131 55.0
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 2.4e-28 129.4 131 52.7
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 3.2e-28 129.0 131 51.1
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 3.2e-28 129.0 131 52.7
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 3.2e-28 129.0 131 52.7
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 5.4e-28 128.3 131 51.1
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 7.1e-28 127.9 131 51.9
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 9.2e-28 127.5 123 52.8
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 1.2e-27 127.1 131 51.1
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 1.2e-27 127.1 131 49.6
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.6e-27 126.7 131 51.9
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 2.7e-27 125.9 131 53.4
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 2.7e-27 125.9 132 57.6
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 2.7e-27 125.9 131 55.0
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 6.0e-27 124.8 134 55.2
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 7.8e-27 124.4 132 47.7
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 1.0e-26 124.0 127 48.8
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.7e-26 123.2 131 51.1
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 2.3e-26 122.9 127 48.8
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 2.3e-26 122.9 131 52.7
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 3.0e-26 122.5 134 54.5
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 3.0e-26 122.5 94 59.6
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 3.9e-26 122.1 131 48.1
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 3.9e-26 122.1 134 54.5
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 3.9e-26 122.1 127 47.2
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 5.1e-26 121.7 131 51.1
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 8.6e-26 120.9 132 49.2
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.1e-25 120.6 131 48.1
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 2.5e-25 119.4 134 53.7
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 7.3e-25 117.9 131 48.9
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 9.6e-25 117.5 131 48.1
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 6.2e-24 114.8 126 46.0
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 8.1e-24 114.4 131 47.3
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.8e-23 113.2 131 44.3
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.8e-23 113.2 131 44.3
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 3.1e-23 112.5 131 51.1
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 4.0e-23 112.1 137 47.4
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 5.8e-22 108.2 131 49.6
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 7.6e-22 107.8 131 45.8
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 9.9e-22 107.5 131 49.6
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 3.2e-20 102.4 131 48.1
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 5.4e-20 101.7 126 41.3
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 3.5e-19 99.0 114 51.8
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 6.0e-19 98.2 91 51.6
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 5.6e-17 91.7 111 55.9
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.6e-16 90.1 90 48.9
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 2.8e-16 89.4 106 41.5
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 6.2e-16 88.2 58 86.2
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 1.1e-15 87.4 126 37.3
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 5.8e-14 81.6 131 44.3
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 1.1e-09 67.4 131 37.4
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.5e-09 67.0 117 32.5
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 4.8e-08 62.0 118 31.4
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 1.4e-07 60.5 115 30.4
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 1.8e-07 60.1 78 43.6


User provided reference genes

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