Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p015796 Quercus lobata HOM05D004178 ORTHO05D005204 9.5e-62 240.0 118 100.0
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 7.8e-24 114.0 98 67.3
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 1.9e-17 92.8 95 57.9
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 2.1e-16 89.4 95 55.8
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 2.7e-16 89.0 103 51.5
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 3.5e-16 88.6 94 56.4
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 3.5e-16 88.6 95 52.6
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 3.5e-16 88.6 94 56.4
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 6.0e-16 87.8 64 71.9
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 1.0e-15 87.0 95 54.7
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 1.3e-15 86.7 64 68.8
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 1.8e-15 86.3 95 52.6
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 1.8e-15 86.3 95 51.6
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 3.0e-15 85.5 64 68.8
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 3.0e-15 85.5 64 70.3
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 8.7e-15 84.0 64 68.8
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 8.7e-15 84.0 94 56.4
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 1.1e-14 83.6 64 68.8
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 1.1e-14 83.6 64 68.8
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 1.5e-14 83.2 95 53.7
Oeu021707.2 Olea europaea HOM05D004178 ORTHO05D005204 3.3e-14 82.0 64 67.2
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 4.3e-14 81.6 64 67.2
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 4.3e-14 81.6 103 49.5
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 5.6e-14 81.3 95 52.6
Atru.chr1.753 Acer truncatum HOM05D004178 ORTHO05D005204 7.4e-14 80.9 105 51.4
CAN.G515.10 Capsicum annuum HOM05D004178 ORTHO05D005204 7.4e-14 80.9 64 64.1
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 9.6e-14 80.5 94 50.0
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 9.6e-14 80.5 103 48.5
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 1.3e-13 80.1 98 51.0
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 3.7e-13 78.6 96 52.1
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 4.8e-13 78.2 94 47.9
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 4.8e-13 78.2 97 49.5
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 6.2e-13 77.8 98 49.0
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 8.1e-13 77.4 89 53.9
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 8.1e-13 77.4 94 51.1
Hund11836 Selenicereus undatus HOM05D004178 ORTHO05D005204 8.1e-13 77.4 103 47.6
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 1.4e-12 76.6 99 48.5
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.8e-12 76.3 93 51.6
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 2.4e-12 75.9 103 48.5
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 3.1e-12 75.5 103 48.5
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 4.0e-12 75.1 103 46.6
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 6.9e-12 74.3 95 47.4
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 6.9e-12 74.3 93 49.5
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 9.0e-12 73.9 95 49.5
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 9.0e-12 73.9 95 46.3
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 1.2e-11 73.6 94 47.9
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 1.5e-11 73.2 94 52.1
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 1.5e-11 73.2 93 45.2
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 2.6e-11 72.4 95 45.3
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 2.6e-11 72.4 64 59.4
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 3.4e-11 72.0 95 48.4
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 3.4e-11 72.0 73 57.5
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 4.5e-11 71.6 94 47.9
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 5.8e-11 71.2 95 47.4
FAN10G1085 Fragaria x ananassa HOM05D004178 ORTHO05D005204 5.8e-11 71.2 95 47.4
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 5.8e-11 71.2 89 51.7
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 7.6e-11 70.9 96 52.1
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 7.6e-11 70.9 94 45.7
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 9.9e-11 70.5 64 54.7
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 9.9e-11 70.5 95 47.4
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 9.9e-11 70.5 93 46.2
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 9.9e-11 70.5 64 57.8
SEGI_03190 Sequoiadendron giganteum HOM05D004178 ORTHO05D005204 9.9e-11 70.5 94 45.7
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 1.3e-10 70.1 98 42.9
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 1.7e-10 69.7 95 46.3
GSVIVG01014042001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.7e-10 69.7 64 60.9
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 2.2e-10 69.3 98 42.9
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 2.2e-10 69.3 98 41.8
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 2.2e-10 69.3 94 48.9
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 2.9e-10 68.9 86 50.0
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 3.8e-10 68.6 98 42.9
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 3.8e-10 68.6 98 42.9
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 3.8e-10 68.6 98 42.9
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 4.9e-10 68.2 98 42.9
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 6.4e-10 67.8 98 42.9
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 6.4e-10 67.8 93 44.1
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 6.4e-10 67.8 94 47.9
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 6.4e-10 67.8 96 44.8
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 8.4e-10 67.4 94 47.9
HPP92_022323 Vanilla planifolia HOM05D004178 ORTHO05D005204 8.4e-10 67.4 64 53.1
HPP92_022331 Vanilla planifolia HOM05D004178 ORTHO05D005204 8.4e-10 67.4 64 53.1
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 1.1e-09 67.0 98 41.8
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 1.1e-09 67.0 98 42.9
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 1.1e-09 67.0 64 57.8
FAN03G2333 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.1e-09 67.0 64 57.8
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.1e-09 67.0 64 57.8
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.1e-09 67.0 64 57.8
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.1e-09 67.0 64 57.8
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 1.4e-09 66.6 98 41.8
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 1.4e-09 66.6 98 41.8
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 1.4e-09 66.6 89 48.3
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 1.9e-09 66.2 70 51.4
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 1.9e-09 66.2 93 46.2
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 1.2e-08 63.5 94 45.7
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 2.1e-08 62.8 64 53.1
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 2.7e-08 62.4 100 39.0
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 3.5e-08 62.0 64 51.6
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 7.9e-08 60.8 63 49.2
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 1.0e-07 60.5 64 50.0
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 1.0e-07 60.5 64 48.4
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 2.3e-07 59.3 64 48.4
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 1.1e-06 57.0 64 45.3
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 4.3e-06 55.1 93 40.9


User provided reference genes

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