Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p040329 Quercus lobata HOM05D001716 ORTHO05D004234 7.4e-56 220.3 113 100.0
QL08p000280 Quercus lobata HOM05D001716 ORTHO05D004234 5.2e-41 171.0 102 89.2
QL05p063882 Quercus lobata HOM05D001716 ORTHO05D004234 1.2e-40 169.9 102 88.2
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 1.5e-40 169.5 102 88.2
QL01p011839 Quercus lobata HOM05D001716 ORTHO05D004234 2.0e-40 169.1 102 88.2
QL10p065861 Quercus lobata HOM05D001716 ORTHO05D004234 7.5e-40 167.2 102 87.3
QL11p041834 Quercus lobata HOM05D001716 ORTHO05D004234 9.8e-40 166.8 102 88.2
QL07p047625 Quercus lobata HOM05D001716 ORTHO05D004234 1.7e-39 166.0 102 88.2
Haze_23345 Corylus avellana HOM05D001716 ORTHO05D004234 5.0e-36 154.5 102 79.4
QL11p002605 Quercus lobata HOM05D001716 ORTHO05D004234 1.5e-35 152.9 95 85.3
CiPaw.14G097900 Carya illinoinensis HOM05D001716 ORTHO05D004234 3.0e-33 145.2 102 73.5
GSVIVG01025181001 Vitis vinifera HOM05D001716 ORTHO05D004234 6.8e-33 144.1 102 71.6
MBI18_g19079_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D004234 9.8e-32 140.2 102 69.6
TAR633G2130 Trochodendron aralioides HOM05D001716 ORTHO05D004234 1.3e-31 139.8 102 70.6
DCAR_006059 Daucus carota HOM05D001716 ORTHO05D004234 1.7e-31 139.4 102 69.6
Actinidia03732 Actinidia chinensis HOM05D001716 ORTHO05D004234 2.8e-31 138.7 102 67.6
Glyma.08G204200 Glycine max HOM05D001716 ORTHO05D004234 3.7e-31 138.3 102 69.6
Actinidia24098 Actinidia chinensis HOM05D001716 ORTHO05D004234 4.9e-31 137.9 102 67.6
VMungo0331G1056 Vigna mungo HOM05D001716 ORTHO05D004234 4.9e-31 137.9 102 69.6
FAN25G1887 Fragaria x ananassa HOM05D001716 ORTHO05D004234 6.3e-31 137.5 102 68.6
TAR623G1135 Trochodendron aralioides HOM05D001716 ORTHO05D004234 8.3e-31 137.1 102 68.6
vmacro14441 Vaccinium macrocarpon HOM05D001716 ORTHO05D004234 8.3e-31 137.1 102 67.6
Dinv32751 Davidia involucrata HOM05D001716 ORTHO05D004234 1.1e-30 136.7 102 67.6
Glyma.07G019000 Glycine max HOM05D001716 ORTHO05D004234 1.1e-30 136.7 102 68.6
PSO339G4331 Papaver somniferum HOM05D001716 ORTHO05D004234 1.4e-30 136.3 102 67.6
Phvul.010G148200 Phaseolus vulgaris HOM05D001716 ORTHO05D004234 1.4e-30 136.3 102 68.6
MSTRG.21126 Avicennia marina HOM05D001716 ORTHO05D004234 1.8e-30 136.0 102 67.6
Manes.04G001300 Manihot esculenta HOM05D001716 ORTHO05D004234 1.8e-30 136.0 102 66.7
PSO384G0177 Papaver somniferum HOM05D001716 ORTHO05D004234 1.8e-30 136.0 102 67.6
ATR0115G019 Amborella trichopoda HOM05D001716 ORTHO05D004234 2.4e-30 135.6 102 66.7
Prupe.6G137000 Prunus persica HOM05D001716 ORTHO05D004234 2.4e-30 135.6 102 66.7
CANSAT01G3043 Cannabis sativa HOM05D001716 ORTHO05D004234 3.1e-30 135.2 102 67.6
Nn3g16472 Nelumbo nucifera HOM05D001716 ORTHO05D004234 3.1e-30 135.2 102 67.6
Oeu030180.1 Olea europaea HOM05D001716 ORTHO05D004234 3.1e-30 135.2 102 68.6
FvH4_3g34140 Fragaria vesca HOM05D001716 ORTHO05D004234 4.1e-30 134.8 102 67.6
Lj2A1029T33 Lonicera japonica HOM05D001716 ORTHO05D004234 4.1e-30 134.8 101 66.3
MSTRG.18657 Avicennia marina HOM05D001716 ORTHO05D004234 5.4e-30 134.4 102 65.7
Migut.L01693 Erythranthe guttata HOM05D001716 ORTHO05D004234 5.4e-30 134.4 102 66.7
FAN20G2299 Fragaria x ananassa HOM05D001716 ORTHO05D004234 5.4e-30 134.4 102 67.6
RcHm_v2.0_Chr6g0278081 Rosa chinensis HOM05D001716 ORTHO05D004234 5.4e-30 134.4 102 67.6
Rhsim01G0217300 Rhododendron simsii HOM05D001716 ORTHO05D004234 9.2e-30 133.7 102 65.7
unitig_747.g21999 Utricularia gibba HOM05D001716 ORTHO05D004234 9.2e-30 133.7 102 66.7
ClCG10G015440 Citrullus lanatus HOM05D001716 ORTHO05D004234 1.2e-29 133.3 102 65.7
Cc01_g11170 Coffea canephora HOM05D001716 ORTHO05D004234 1.2e-29 133.3 102 65.7
CsaV3_3G041050 Cucumis sativus L. HOM05D001716 ORTHO05D004234 1.2e-29 133.3 102 65.7
FAN16G0345 Fragaria x ananassa HOM05D001716 ORTHO05D004234 1.2e-29 133.3 102 67.6
SGA_v2.0_scaffold7G04105 Striga asiatica HOM05D001716 ORTHO05D004234 1.2e-29 133.3 102 65.7
FAN21G3845 Fragaria x ananassa HOM05D001716 ORTHO05D004234 1.6e-29 132.9 102 67.6
FAN25G1324 Fragaria x ananassa HOM05D001716 ORTHO05D004234 1.6e-29 132.9 102 67.6
TPR.G25359 Trifolium pratense HOM05D001716 ORTHO05D004234 2.0e-29 132.5 102 63.7
Ca_15874_v3 Cicer arietinum L. HOM05D001716 ORTHO05D004234 2.7e-29 132.1 102 63.7
Nitab4.5_0000650g0210 Nicotiana tabacum HOM05D001716 ORTHO05D004234 2.7e-29 132.1 102 65.7
CSS0009123 Camellia sinensis var. sinensis HOM05D001716 ORTHO05D004234 3.5e-29 131.7 102 63.7
CSS0024984 Camellia sinensis var. sinensis HOM05D001716 ORTHO05D004234 3.5e-29 131.7 102 63.7
MELO3C009838.2 Cucumis melo HOM05D001716 ORTHO05D004234 3.5e-29 131.7 102 64.7
MD03G1150000 Malus domestica HOM05D001716 ORTHO05D004234 3.5e-29 131.7 102 64.7
PGR119G1888 Punica granatum HOM05D001716 ORTHO05D004234 3.5e-29 131.7 102 63.7
ECA236G0721 Erigeron canadensis HOM05D001716 ORTHO05D004234 4.5e-29 131.3 102 64.7
LjContig00081g0024923 Lotus japonicus HOM05D001716 ORTHO05D004234 4.5e-29 131.3 102 64.7
SGA_v2.0_scaffold196G40980 Striga asiatica HOM05D001716 ORTHO05D004234 4.5e-29 131.3 102 65.7
HPP92_018992 Vanilla planifolia HOM05D001716 ORTHO05D004234 4.5e-29 131.3 102 64.7
arahy.Tifrunner.gnm1.ann1.K86VTF Arachis hypogaea HOM05D001716 ORTHO05D004234 5.9e-29 131.0 102 63.7
Cpa.g.sc195.28 Carica papaya HOM05D001716 ORTHO05D004234 5.9e-29 131.0 102 64.7
Aqoxy3G01288 Aquilegia oxysepala HOM05D001716 ORTHO05D004234 7.8e-29 130.6 102 63.7
Duzib150G0371 Durio zibethinus HOM05D001716 ORTHO05D004234 7.8e-29 130.6 102 64.7
Duzib170G0593 Durio zibethinus HOM05D001716 ORTHO05D004234 7.8e-29 130.6 102 64.7
Solyc06g062350.4 Solanum lycopersicum HOM05D001716 ORTHO05D004234 7.8e-29 130.6 102 64.7
Solyc11g069370.3 Solanum lycopersicum HOM05D001716 ORTHO05D004234 7.8e-29 130.6 102 64.7
Sopen06g021570 Solanum pennellii HOM05D001716 ORTHO05D004234 7.8e-29 130.6 102 64.7
Sopen11g028090 Solanum pennellii HOM05D001716 ORTHO05D004234 7.8e-29 130.6 102 64.7
MD11G1168700 Malus domestica HOM05D001716 ORTHO05D004234 1.0e-28 130.2 102 62.7
arahy.Tifrunner.gnm1.ann1.07RPJW Arachis hypogaea HOM05D001716 ORTHO05D004234 1.3e-28 129.8 102 62.7
Gohir.D09G096900 Gossypium hirsutum HOM05D001716 ORTHO05D004234 1.3e-28 129.8 102 63.7
Gorai.006G113600 Gossypium raimondii HOM05D001716 ORTHO05D004234 1.3e-28 129.8 102 63.7
Lsat_1_v5_gn_2_98340 Lactuca sativa HOM05D001716 ORTHO05D004234 1.3e-28 129.8 102 63.7
Lalb_Chr22g0351411 Lupinus albus HOM05D001716 ORTHO05D004234 1.3e-28 129.8 101 65.3
Sed0005678 Sechium edule HOM05D001716 ORTHO05D004234 1.3e-28 129.8 102 63.7
TWI15G0368 Tripterygium wilfordii HOM05D001716 ORTHO05D004234 1.3e-28 129.8 102 64.7
Ciclev10011670m.g Citrus clementina HOM05D001716 ORTHO05D004234 1.7e-28 129.4 102 63.7
Hma1.2p1_1031F.1_g250030 Hydrangea macrophylla HOM05D001716 ORTHO05D004234 1.7e-28 129.4 96 68.8
Medtr3g104080 Medicago truncatula HOM05D001716 ORTHO05D004234 1.7e-28 129.4 102 61.8
CAN.G631.23 Capsicum annuum HOM05D001716 ORTHO05D004234 2.3e-28 129.0 102 63.7
Lj1g0022809 Lotus japonicus HOM05D001716 ORTHO05D004234 2.3e-28 129.0 96 67.7
Sc21g0006950 Simmondsia chinensis HOM05D001716 ORTHO05D004234 2.3e-28 129.0 102 61.8
Atru.chr3.3167 Acer truncatum HOM05D001716 ORTHO05D004234 2.9e-28 128.6 102 62.7
RcHm_v2.0_Chr5g0061781 Rosa chinensis HOM05D001716 ORTHO05D004234 2.9e-28 128.6 102 65.7
PGSC0003DMG400008103 Solanum tuberosum HOM05D001716 ORTHO05D004234 3.8e-28 128.3 102 63.7
Eucgr.J00524 Eucalyptus grandis HOM05D001716 ORTHO05D004234 5.0e-28 127.9 102 61.8
HanXRQChr14g0452881 Helianthus annuus HOM05D001716 ORTHO05D004234 5.0e-28 127.9 102 62.7
Actinidia07135 Actinidia chinensis HOM05D001716 ORTHO05D004234 6.6e-28 127.5 85 72.9
AT5G22330 Arabidopsis thaliana HOM05D001716 ORTHO05D004234 6.6e-28 127.5 102 62.7
Gohir.A05G079400 Gossypium hirsutum HOM05D001716 ORTHO05D004234 6.6e-28 127.5 102 63.7
Gohir.A09G097100 Gossypium hirsutum HOM05D001716 ORTHO05D004234 6.6e-28 127.5 102 62.7
Gohir.D05G082300 Gossypium hirsutum HOM05D001716 ORTHO05D004234 6.6e-28 127.5 102 63.7
PGSC0003DMG402016772 Solanum tuberosum HOM05D001716 ORTHO05D004234 6.6e-28 127.5 102 64.7
AL6G33350 Arabidopsis lyrata HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
BcaB05g22733 Brassica carinata HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
BcaB08g36439 Brassica carinata HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
BcaC03g13875 Brassica carinata HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
BcaC04g19566 Brassica carinata HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
A10p18490 Brassica napus HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
C02p10820 Brassica napus HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
BolC2t07150H Brassica oleracea HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
BolC9t58299H Brassica oleracea HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
BraA10t43929Z Brassica rapa HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
Carub.0006s2007 Capsella rubella HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
AUR62018729 Chenopodium quinoa HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 60.8
Sp6g22910 Schrenkiella parvula HOM05D001716 ORTHO05D004234 8.6e-28 127.1 102 62.7
Ah.12g054910 Amaranthus hybridus HOM05D001716 ORTHO05D004234 1.1e-27 126.7 98 63.3
Thhalv10013490m.g Eutrema salsugineum HOM05D001716 ORTHO05D004234 1.1e-27 126.7 102 60.8
Peaxi162Scf00270g00813 Petunia axillaris HOM05D001716 ORTHO05D004234 1.1e-27 126.7 101 64.4
THA.LOC104799554 Tarenaya hassleriana HOM05D001716 ORTHO05D004234 1.1e-27 126.7 102 59.8
AUR62007270 Chenopodium quinoa HOM05D001716 ORTHO05D004234 1.5e-27 126.3 102 60.8
FvH4_2g15321 Fragaria vesca HOM05D001716 ORTHO05D004234 1.5e-27 126.3 91 71.4
Gorai.009G083900 Gossypium raimondii HOM05D001716 ORTHO05D004234 1.5e-27 126.3 102 62.7
Psat5g037320 Pisum sativum HOM05D001716 ORTHO05D004234 1.5e-27 126.3 97 62.9
Thecc.09G278500 Theobroma cacao HOM05D001716 ORTHO05D004234 1.5e-27 126.3 102 61.8
Potri.004G199100 Populus trichocarpa HOM05D001716 ORTHO05D004234 1.9e-27 125.9 102 64.7
Medtr6g023370 Medicago truncatula HOM05D001716 ORTHO05D004234 2.5e-27 125.6 102 60.8
BNapus_Darmor_BZH_scaffold_38p00730 Brassica napus HOM05D001716 ORTHO05D004234 3.3e-27 125.2 102 61.8
C03p12300 Brassica napus HOM05D001716 ORTHO05D004234 3.3e-27 125.2 102 61.8
BolC3t13703H Brassica oleracea HOM05D001716 ORTHO05D004234 3.3e-27 125.2 102 61.8
BraA02t05652Z Brassica rapa HOM05D001716 ORTHO05D004234 3.3e-27 125.2 102 61.8
Sed0012939 Sechium edule HOM05D001716 ORTHO05D004234 3.3e-27 125.2 102 62.7
BcaB01g04715 Brassica carinata HOM05D001716 ORTHO05D004234 4.3e-27 124.8 102 61.8
CARHR191210 Cardamine hirsuta HOM05D001716 ORTHO05D004234 4.3e-27 124.8 102 61.8
Lalb_Chr14g0373181 Lupinus albus HOM05D001716 ORTHO05D004234 4.3e-27 124.8 82 73.2
Zm00001eb231050 Zea mays HOM05D001716 ORTHO05D004234 4.3e-27 124.8 102 59.8
Potri.009G160600 Populus trichocarpa HOM05D001716 ORTHO05D004234 1.2e-26 123.2 102 63.7
Zm00001eb208840 Zea mays HOM05D001716 ORTHO05D004234 1.6e-26 122.9 102 57.8
A03p10690 Brassica napus HOM05D001716 ORTHO05D004234 2.1e-26 122.5 102 59.8
Aa31LG1G13210 Aethionema arabicum HOM05D001716 ORTHO05D004234 3.6e-26 121.7 102 59.8
FAN11G1436 Fragaria x ananassa HOM05D001716 ORTHO05D004234 6.1e-26 120.9 127 54.3
Os01g0837500 Oryza sativa ssp. japonica HOM05D001716 ORTHO05D004234 6.1e-26 120.9 102 58.8
BraA03t10381Z Brassica rapa HOM05D001716 ORTHO05D004234 1.4e-25 119.8 102 59.8
Os07g0178900 Oryza sativa ssp. japonica HOM05D001716 ORTHO05D004234 1.8e-25 119.4 102 58.8
vmacro14780 Vaccinium macrocarpon HOM05D001716 ORTHO05D004234 4.0e-25 118.2 76 73.7
CDE06G2061 Ceratophyllum demersum HOM05D001716 ORTHO05D004234 5.2e-25 117.9 82 72.0
PGR102G0473 Punica granatum HOM05D001716 ORTHO05D004234 6.8e-25 117.5 93 61.3
SEGI_07638 Sequoiadendron giganteum HOM05D001716 ORTHO05D004234 3.4e-24 115.2 82 67.1
RcHm_v2.0_Chr6g0278111 Rosa chinensis HOM05D001716 ORTHO05D004234 1.7e-23 112.8 128 51.6
Mapoly0108s0031 Marchantia polymorpha HOM05D001716 ORTHO05D004234 1.1e-22 110.2 96 58.3
Pp3c16_21430 Physcomitrium patens HOM05D001716 ORTHO05D004234 1.1e-22 110.2 96 57.3
SMO351G0419 Selaginella moellendorffii HOM05D001716 ORTHO05D004234 1.2e-21 106.7 96 55.2
CBR_g52323 Chara braunii HOM05D001716 ORTHO05D004234 2.0e-21 105.9 96 55.2
vmacro12158 Vaccinium macrocarpon HOM05D001716 ORTHO05D004234 2.0e-21 105.9 102 56.9
CBR_g72636 Chara braunii HOM05D001716 ORTHO05D004234 2.7e-21 105.5 96 55.2
C09p54240 Brassica napus HOM05D001716 ORTHO05D004234 5.9e-21 104.4 91 56.0
C09p54320 Brassica napus HOM05D001716 ORTHO05D004234 5.9e-21 104.4 91 56.0
Peaxi162Scf00101g00092 Petunia axillaris HOM05D001716 ORTHO05D004234 1.7e-20 102.8 104 52.9
AagrBONN_evm.TU.Sc2ySwM_368.3436 Anthoceros agrestis HOM05D001716 ORTHO05D004234 8.6e-20 100.5 95 52.6
Cre09.g414050 Chlamydomonas reinhardtii HOM05D001716 ORTHO05D004234 1.9e-19 99.4 96 52.1
MCO03G216 Micromonas commoda HOM05D001716 ORTHO05D004234 9.5e-19 97.1 96 53.1
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 1.1e-17 93.6 73 63.0
Migut.D02220 Erythranthe guttata HOM05D001716 ORTHO05D004234 6.8e-17 90.9 73 61.6
PRCOL_00001022 Prasinoderma coloniale HOM05D001716 ORTHO05D004234 8.9e-17 90.5 94 50.0
BcaC01g06591 Brassica carinata HOM05D001716 ORTHO05D004234 7.5e-16 87.4 87 51.7
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 4.9e-15 84.7 76 57.9
Lalb_Chr01g0013001 Lupinus albus HOM05D001716 ORTHO05D004234 8.3e-15 84.0 73 57.5
HPP92_019095 Vanilla planifolia HOM05D001716 ORTHO05D004234 9.2e-14 80.5 50 78.0
Nitab4.5_0011114g0040 Nicotiana tabacum HOM05D001716 ORTHO05D004234 3.9e-12 75.1 46 73.9
Lj4g0002833 Lotus japonicus HOM05D001716 ORTHO05D004234 4.7e-10 68.2 60 56.7
PGR102G1811 Punica granatum HOM05D001716 ORTHO05D004234 1.8e-09 66.2 73 46.6
CDE02G4288 Ceratophyllum demersum HOM05D001716 ORTHO05D004234 4.0e-09 65.1 62 54.8
Haze_26292 Corylus avellana HOM05D001716 ORTHO05D004234 6.8e-09 64.3 92 39.1


User provided reference genes

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