Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 0.0e+00 1234.2 666 100.0
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 5.9e-209 731.5 674 65.7
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 5.5e-207 724.9 676 65.2
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 1.2e-177 627.5 682 55.4
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 5.0e-176 622.1 672 56.2
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 3.4e-172 609.4 758 54.9
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 8.0e-166 588.2 677 57.2
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 8.0e-166 588.2 676 57.1
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 2.3e-165 586.6 629 59.5
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 4.4e-164 582.4 677 54.7
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 2.7e-161 573.2 675 55.4
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 1.0e-160 571.2 708 49.9
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 1.3e-160 570.9 698 50.9
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 5.0e-160 568.9 682 51.8
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 6.6e-160 568.5 677 56.7
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 5.6e-159 565.5 682 52.1
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.4e-157 560.8 676 53.7
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 1.4e-157 560.8 676 53.7
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 6.8e-157 558.5 698 51.3
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 1.5e-156 557.4 684 52.0
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 2.9e-155 553.1 671 55.6
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 3.7e-155 552.7 674 54.9
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 3.7e-155 552.7 674 55.2
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 9.2e-154 548.1 744 51.2
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 1.6e-153 547.4 682 51.5
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 5.6e-151 538.9 747 49.5
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 5.6e-151 538.9 704 53.3
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 5.6e-151 538.9 679 54.5
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 8.9e-149 531.6 676 50.3
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 4.4e-148 529.3 687 53.0
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 4.4e-148 529.3 680 54.3
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 9.8e-148 528.1 598 53.3
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 8.3e-147 525.0 497 62.2
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.3e-144 517.7 690 49.3
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 2.5e-143 513.5 725 49.1
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 1.2e-142 511.1 725 49.0
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 2.1e-142 510.4 748 50.1
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 2.0e-140 503.8 790 47.5
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 4.9e-139 499.2 630 54.3
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 8.3e-139 498.4 712 47.8
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 1.4e-138 497.7 690 51.6
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 6.0e-137 492.3 787 47.6
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.7e-136 490.7 740 47.6
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 4.3e-135 486.1 693 49.4
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 4.3e-135 486.1 651 48.7
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 4.3e-135 486.1 591 53.6
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 5.6e-135 485.7 668 51.3
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 3.6e-134 483.0 631 53.6
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 6.2e-134 482.3 635 50.2
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 2.4e-133 480.3 506 60.9
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 3.1e-133 479.9 701 44.2
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 2.9e-131 473.4 605 50.2
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 6.4e-131 472.2 709 47.5
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 1.7e-128 464.2 728 46.4
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 2.3e-128 463.8 488 60.0
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 3.3e-127 459.9 526 54.4
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 7.3e-127 458.8 671 47.1
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 8.1e-126 455.3 673 45.3
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 4.0e-125 453.0 464 61.0
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 2.0e-124 450.7 398 58.8
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 9.9e-124 448.4 695 47.3
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 2.9e-123 446.8 747 44.4
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 4.9e-123 446.0 676 47.5
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 1.1e-122 444.9 667 45.9
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 2.4e-122 443.7 679 46.7
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 2.4e-122 443.7 679 46.7
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 1.6e-121 441.0 679 46.4
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 1.6e-121 441.0 656 48.2
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 3.5e-121 439.9 703 44.0
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 1.3e-120 438.0 707 45.4
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 1.7e-120 437.6 682 45.7
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 5.1e-120 436.0 642 49.1
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 6.6e-120 435.6 621 45.2
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 1.5e-119 434.5 675 46.2
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 3.3e-119 433.3 740 44.9
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.8e-118 430.3 673 46.4
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 1.1e-117 428.3 711 45.0
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 2.0e-116 424.1 670 47.0
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 3.4e-116 423.3 670 46.4
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.3e-115 421.4 676 46.2
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 4.9e-115 419.5 674 45.5
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 9.3e-114 415.2 656 46.8
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 7.9e-113 412.1 670 42.5
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 1.3e-112 411.4 711 41.4
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 2.8e-110 403.7 367 58.3
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 1.2e-108 398.3 613 44.7
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 6.4e-107 392.5 245 78.8
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 5.5e-106 389.4 455 51.9
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.0e-104 385.2 549 44.4
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 5.1e-104 382.9 659 44.8
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 8.4e-99 365.5 554 42.1
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.4e-98 364.8 503 47.7
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 1.9e-98 364.4 615 43.3
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 4.2e-98 363.2 558 44.3
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 5.5e-98 362.8 556 41.7
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 5.5e-98 362.8 556 41.7
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 7.1e-98 362.5 588 43.7
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 1.2e-97 361.7 558 43.4
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 3.9e-96 356.7 665 42.0
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 1.1e-95 355.1 551 43.6
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 1.1e-93 348.6 444 43.9
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 5.9e-92 342.8 778 36.5
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 8.8e-88 328.9 656 39.9
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 3.3e-87 327.0 751 38.7
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 8.2e-86 322.4 748 36.6
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 1.4e-85 321.6 498 42.6
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 1.0e-83 315.5 546 45.6
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 3.6e-81 307.0 644 38.0
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 4.1e-77 293.5 394 47.0
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 9.1e-77 292.4 655 38.9
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 1.4e-74 285.0 402 40.8
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 4.2e-74 283.5 399 39.8
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 7.0e-69 266.2 688 33.7
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 8.5e-67 259.2 405 35.3
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 4.0e-64 250.4 537 38.2
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 7.7e-60 236.1 373 46.4
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.2e-57 228.8 382 42.4
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 5.9e-52 209.9 124 82.3
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 1.7e-46 191.8 184 52.2
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 8.3e-46 189.5 416 32.5
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.0e-40 172.6 324 42.9
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 8.6e-35 152.9 355 32.1
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 2.3e-32 144.8 184 45.1
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 1.2e-31 142.5 98 71.4
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 1.4e-24 119.0 73 79.5
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 2.3e-24 118.2 115 57.4
QL05p062602 Quercus lobata HOM05D001008 ORTHO05D009098 3.9e-19 100.9 115 47.0
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 8.6e-19 99.8 101 50.5
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 8.6e-19 99.8 62 69.4
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 1.9e-18 98.6 178 37.1
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-18 97.8 101 49.5
QL05p019557 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-18 97.4 77 58.4
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-17 95.9 101 48.5
QL06p025333 Quercus lobata HOM05D002747 ORTHO05D003069 4.7e-17 94.0 105 47.6
QL07p031183 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-17 93.6 161 35.4
QL09p026662 Quercus lobata HOM05D000917 ORTHO05D000764 8.1e-17 93.2 108 43.5
QL06p010043 Quercus lobata HOM05D000003 ORTHO05D000004 5.2e-16 90.5 70 58.6
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 2.0e-15 88.6 52 71.2
QL01p019206 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-15 87.8 70 55.7
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 3.4e-15 87.8 125 38.4
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 7.6e-15 86.7 104 42.3
QL07p024662 Quercus lobata HOM05D000003 ORTHO05D013261 7.6e-15 86.7 79 50.6
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 9.9e-15 86.3 100 45.0
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.3e-14 85.9 105 41.9
QL09p047247 Quercus lobata HOM05D000003 ORTHO05D001231 1.7e-14 85.5 70 55.7
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.2e-14 85.1 60 66.7
QL03p029580 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-14 84.7 66 57.6
QL12p034051 Quercus lobata HOM05D000329 ORTHO05D000833 6.4e-14 83.6 63 57.1
QL09p042482 Quercus lobata HOM05D003081 ORTHO05D003627 8.4e-14 83.2 117 39.3
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 1.1e-13 82.8 62 58.1
QL11p057128 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-13 82.4 66 56.1
QL11p041058 Quercus lobata HOM05D000267 ORTHO05D012891 3.2e-13 81.3 97 43.3
QL04p052291 Quercus lobata HOM05D004322 ORTHO05D005033 5.4e-13 80.5 60 60.0
QL05p025142 Quercus lobata HOM05D003420 ORTHO05D003970 5.4e-13 80.5 125 39.2
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 7.1e-13 80.1 57 59.6
QL11p024822 Quercus lobata HOM05D000003 ORTHO05D000004 9.2e-13 79.7 108 40.7
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 2.1e-12 78.6 142 35.2
MSTRG.15763 Avicennia marina HOM05D005778 ORTHO05D038954 1.7e-11 75.5 336 34.2
QL02p037654 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-11 73.9 37 86.5
QL02p091725 Quercus lobata HOM05D000399 ORTHO05D000304 5.1e-11 73.9 158 32.3
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 5.1e-11 73.9 68 50.0
QL08p057473 Quercus lobata HOM05D000283 ORTHO05D004861 8.7e-11 73.2 57 54.4
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 2.5e-10 71.6 45 82.2
QL08p028067 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-10 71.6 101 38.6
QL07p017571 Quercus lobata HOM05D002168 ORTHO05D002277 1.6e-09 68.9 105 38.1
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 1.6e-09 68.9 56 57.1
QL02p038779 Quercus lobata HOM05D000803 ORTHO05D007008 1.4e-08 65.9 70 45.7
QL02p102677 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-08 65.1 65 46.2
QL02p012254 Quercus lobata HOM05D003211 ORTHO05D003621 6.9e-08 63.5 90 42.2
QL01p017079 Quercus lobata HOM05D001657 ORTHO05D001557 2.0e-07 62.0 52 53.8
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 4.4e-07 60.8 66 40.9
QL08p008133 Quercus lobata HOM05D000003 ORTHO05D000004 4.4e-07 60.8 66 45.5
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.6e-07 60.1 76 36.8
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 7.6e-07 60.1 65 40.0
QL03p039930 Quercus lobata HOM05D000003 ORTHO05D000004 9.9e-07 59.7 62 43.5
QL03p049447 Quercus lobata HOM05D000268 ORTHO05D000261 9.9e-07 59.7 70 42.9
CARHR113280 Cardamine hirsuta HOM05D000125 ORTHO05D009513 1.3e-06 59.3 37 67.6
QL06p003940 Quercus lobata HOM05D002900 ORTHO05D014254 2.2e-06 58.5 31 77.4
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 2.2e-06 58.5 65 40.0
QL06p005440 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-06 58.2 68 38.2
QL08p060724 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-06 58.2 79 40.5
QL11p032628 Quercus lobata HOM05D002228 ORTHO05D002347 2.9e-06 58.2 73 38.4
ECA236G3617 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-06 57.8 109 23.9
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 3.8e-06 57.8 61 42.6
QL07p023149 Quercus lobata HOM05D004743 ORTHO05D005698 3.8e-06 57.8 62 41.9
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 3.8e-06 57.8 66 39.4
QL10p052033 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-06 57.4 113 31.9


User provided reference genes

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