Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 3.8e-199 698.0 349 100.0
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 8.6e-103 377.9 349 58.7
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.9e-102 376.7 349 58.5
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 4.4e-99 365.5 349 58.2
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.9e-97 360.1 338 57.4
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 4.7e-93 345.5 344 54.4
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.2e-89 331.3 349 52.7
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 4.3e-86 322.4 349 52.4
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 4.3e-86 322.4 341 53.4
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 7.3e-86 321.6 343 51.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.1e-85 320.1 347 51.3
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 2.8e-85 319.7 341 52.8
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.6e-85 319.3 341 52.8
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.8e-84 317.0 344 50.6
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.8e-84 317.0 344 50.6
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.8e-84 317.0 344 50.9
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.0e-83 313.5 344 50.3
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 7.6e-83 311.6 344 52.9
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 9.9e-83 311.2 342 50.6
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.2e-82 310.1 349 51.0
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.2e-82 310.1 349 51.0
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.8e-82 309.3 335 51.0
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.9e-82 308.9 341 50.7
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 4.9e-82 308.9 346 50.0
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 6.4e-82 308.5 355 50.1
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 6.4e-82 308.5 346 51.7
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 4.2e-81 305.8 352 50.3
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.0e-79 301.2 332 51.8
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 5.1e-79 298.9 325 49.8
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 8.7e-79 298.1 354 48.9
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.3e-78 295.8 370 47.6
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 7.3e-78 295.0 351 46.4
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 2.1e-77 293.5 341 47.8
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 3.6e-77 292.7 351 46.4
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 3.6e-77 292.7 351 46.2
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 6.2e-77 292.0 350 47.7
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 6.2e-77 292.0 351 47.6
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.8e-76 290.4 346 48.8
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.8e-76 290.4 359 49.0
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.4e-76 290.0 328 48.8
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 3.1e-76 289.7 343 47.5
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 4.0e-76 289.3 344 47.7
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 4.0e-76 289.3 352 46.9
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 6.9e-76 288.5 312 51.0
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 2.0e-75 287.0 341 47.5
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 3.4e-75 286.2 348 46.8
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 3.4e-75 286.2 379 44.6
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 7.6e-75 285.0 348 46.6
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 7.6e-75 285.0 348 46.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 9.9e-75 284.6 348 47.1
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 1.7e-74 283.9 352 45.5
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 8.4e-74 281.6 353 46.5
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.1e-73 281.2 348 47.4
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 4.2e-73 279.3 346 46.8
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.2e-72 277.7 398 43.5
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 2.7e-72 276.6 344 46.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 2.7e-72 276.6 354 46.9
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 4.6e-72 275.8 320 48.8
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 5.1e-71 272.3 345 44.1
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 5.1e-71 272.3 345 44.3
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.9e-70 270.4 341 46.9
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.5e-70 270.0 347 46.4
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 6.2e-69 265.4 347 45.0
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 8.1e-69 265.0 324 49.4
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.1e-68 264.6 347 45.0
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 6.9e-68 261.9 348 44.8
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 6.9e-68 261.9 348 45.1
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 9.0e-68 261.5 330 45.5
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.2e-67 261.2 324 48.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 3.4e-67 259.6 346 44.5
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 5.8e-67 258.8 348 44.8
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 5.8e-67 258.8 347 44.7
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 9.9e-67 258.1 349 43.6
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 9.9e-67 258.1 348 44.8
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.3e-66 257.7 349 42.1
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 6.4e-66 255.4 337 46.3
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 3.2e-65 253.1 347 44.4
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.0e-63 248.1 316 44.0
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 6.7e-63 245.4 348 42.8
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 6.7e-63 245.4 350 42.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.5e-62 244.2 355 42.0
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 7.4e-62 241.9 322 44.4
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.3e-61 241.1 378 41.5
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.3e-61 241.1 345 43.5
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 1.6e-61 240.7 360 43.3
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.4e-60 237.7 352 40.6
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 9.0e-60 235.0 351 42.5
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 2.6e-59 233.4 323 41.8
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 2.2e-58 230.3 535 32.3
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 2.2e-58 230.3 345 41.2
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.8e-58 229.6 348 40.8
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 8.4e-58 228.4 354 41.5
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.1e-56 223.8 350 40.3
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.1e-56 223.8 350 40.3
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 7.4e-54 215.3 267 42.7
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.7e-50 204.1 347 38.0
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 3.6e-48 196.4 308 40.6
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.3e-47 193.7 169 62.1
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 7.4e-46 188.7 164 63.4
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 6.1e-40 169.1 251 38.6
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 1.0e-39 168.3 226 39.4
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.8e-37 160.2 157 56.7
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.7e-32 143.7 121 65.3
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 2.3e-31 140.6 327 30.0
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 5.2e-31 139.4 92 65.2
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 3.3e-30 136.7 354 31.6
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 9.1e-28 128.6 98 59.2
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 5.0e-26 122.9 339 26.3
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 3.7e-21 106.7 130 54.6
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 3.5e-19 100.1 88 50.0
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 1.7e-18 97.8 125 50.4
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 7.2e-17 92.4 224 30.4
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.4e-15 88.2 87 54.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 3.7e-13 80.1 94 51.1
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 3.7e-13 80.1 85 54.1
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 1.1e-12 78.6 150 35.3
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 2.0e-11 74.3 52 53.8
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.5e-09 68.2 56 51.8
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 1.6e-08 64.7 75 34.7
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 8.0e-08 62.4 94 34.0
FvH4_6g04370 Fragaria vesca HOM05D045458 ORTHO05D045905 3.4e-06 57.0 42 59.5
FAN11G2595 Fragaria x ananassa HOM05D045458 ORTHO05D045905 9.8e-06 55.5 38 63.2


User provided reference genes

Program Settings