Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p024080 Quercus lobata HOM05D001537 ORTHO05D013980 3.1e-165 585.1 301 100.0
QL05p023971 Quercus lobata HOM05D000071 ORTHO05D000029 2.7e-97 359.4 260 75.4
QL05p024197 Quercus lobata HOM05D001537 ORTHO05D002595 5.9e-92 341.7 311 65.3
QL05p024162 Quercus lobata HOM05D001537 ORTHO05D013980 6.8e-72 275.0 289 59.2
Cfa002066 Carpinus fangiana HOM05D001537 ORTHO05D002595 8.3e-62 241.5 268 54.1
QL05p023759 Quercus lobata HOM05D001537 ORTHO05D013980 1.7e-59 233.8 123 95.1
Haze_16429 Corylus avellana HOM05D001537 ORTHO05D002595 6.6e-59 231.9 319 47.6
CiPaw.01G239300 Carya illinoinensis HOM05D001537 ORTHO05D002595 1.1e-42 177.9 238 47.1
Atru.chr1.3271 Acer truncatum HOM05D001537 ORTHO05D002595 3.3e-42 176.4 245 45.7
RcHm_v2.0_Chr2g0137871 Rosa chinensis HOM05D001537 ORTHO05D002595 3.6e-41 172.9 247 47.8
Potri.001G180200 Populus trichocarpa HOM05D001537 ORTHO05D002595 1.5e-39 167.5 250 43.6
TWI12G1035 Tripterygium wilfordii HOM05D001537 ORTHO05D002595 1.3e-38 164.5 250 40.8
GSVIVG01017107001 Vitis vinifera HOM05D001537 ORTHO05D013980 3.8e-38 162.9 217 44.7
Duzib235G1517 Durio zibethinus HOM05D001537 ORTHO05D002595 1.9e-37 160.6 248 41.1
TAR636G3516 Trochodendron aralioides HOM05D001537 ORTHO05D002595 5.4e-37 159.1 310 37.7
MD17G1195000 Malus domestica HOM05D001537 ORTHO05D002595 4.3e-34 149.4 257 41.6
Gohir.A06G188300 Gossypium hirsutum HOM05D001537 ORTHO05D002595 1.2e-33 147.9 210 44.8
FvH4_6g31180 Fragaria vesca HOM05D001537 ORTHO05D002595 8.1e-33 145.2 256 42.2
Hma1.2p1_0092F.1_g046630 Hydrangea macrophylla HOM05D001537 ORTHO05D013980 8.1e-33 145.2 244 41.0
Sed0016827 Sechium edule HOM05D001537 ORTHO05D002595 1.4e-32 144.4 283 35.3
Rhsim08G0221300 Rhododendron simsii HOM05D001537 ORTHO05D002595 2.4e-32 143.7 242 41.3
FAN05G3427 Fragaria x ananassa HOM05D001537 ORTHO05D002595 3.1e-32 143.3 256 42.2
Manes.11G047500 Manihot esculenta HOM05D001537 ORTHO05D002595 9.0e-32 141.7 250 40.4
Actinidia08978 Actinidia chinensis HOM05D001537 ORTHO05D002595 1.2e-31 141.4 239 42.7
Prupe.3G071000 Prunus persica HOM05D001537 ORTHO05D002595 5.8e-31 139.0 260 39.2
CsaV3_7G033170 Cucumis sativus L. HOM05D001537 ORTHO05D002595 2.9e-30 136.7 288 34.7
Gorai.010G228200 Gossypium raimondii HOM05D001537 ORTHO05D002595 1.4e-29 134.4 210 43.3
Gohir.D06G194400 Gossypium hirsutum HOM05D001537 ORTHO05D002595 2.4e-29 133.7 210 42.4
Nn8g39217 Nelumbo nucifera HOM05D001537 ORTHO05D002595 7.1e-29 132.1 303 33.3
ClCG09G002140 Citrullus lanatus HOM05D001537 ORTHO05D002595 9.3e-29 131.7 253 36.4
arahy.Tifrunner.gnm1.ann1.I8FNU5 Arachis hypogaea HOM05D001537 ORTHO05D002595 4.6e-28 129.4 205 42.4
arahy.Tifrunner.gnm1.ann1.YVS4XZ Arachis hypogaea HOM05D001537 ORTHO05D002595 4.6e-28 129.4 205 42.4
vmacro18913 Vaccinium macrocarpon HOM05D001537 ORTHO05D002595 4.6e-28 129.4 243 38.7
FAN14G4499 Fragaria x ananassa HOM05D001537 ORTHO05D002595 1.3e-27 127.9 237 41.8
Dinv30509 Davidia involucrata HOM05D001537 ORTHO05D002595 3.0e-27 126.7 212 43.9
Eucgr.F03013 Eucalyptus grandis HOM05D001537 ORTHO05D002595 5.1e-27 125.9 234 38.9
MELO3C024231.2 Cucumis melo HOM05D001537 ORTHO05D002595 1.6e-25 120.9 291 32.6
Medtr2g102150 Medicago truncatula HOM05D001537 ORTHO05D002595 8.1e-25 118.6 208 41.3
Lalb_Chr22g0351281 Lupinus albus HOM05D001537 ORTHO05D002595 1.8e-24 117.5 197 41.6
Glyma.13G359400 Glycine max HOM05D001537 ORTHO05D002595 4.0e-24 116.3 196 40.3
Lj5A60G62 Lonicera japonica HOM05D001537 ORTHO05D013980 6.9e-24 115.5 204 39.7
Phvul.005G171300 Phaseolus vulgaris HOM05D001537 ORTHO05D002595 1.2e-23 114.8 266 36.5
CANSAT56G0841 Cannabis sativa HOM05D001537 ORTHO05D002595 3.4e-23 113.2 233 36.5
Nitab4.5_0000671g0080 Nicotiana tabacum HOM05D001537 ORTHO05D002595 7.6e-23 112.1 235 35.7
Psat5g298960 Pisum sativum HOM05D001537 ORTHO05D002595 7.6e-23 112.1 218 39.0
VMungo1080G0222 Vigna mungo HOM05D001537 ORTHO05D002595 9.9e-23 111.7 233 39.5
COL.COLO4_30371 Corchorus olitorius HOM05D001537 ORTHO05D002595 2.2e-22 110.5 199 39.7
PSO210G1376 Papaver somniferum HOM05D001537 ORTHO05D002595 2.2e-22 110.5 207 37.2
Solyc03g120200.2 Solanum lycopersicum HOM05D001537 ORTHO05D002595 2.2e-22 110.5 237 34.6
PGR102G0923 Punica granatum HOM05D001537 ORTHO05D002595 2.9e-22 110.2 223 37.2
Sopen03g039070 Solanum pennellii HOM05D001537 ORTHO05D002595 3.8e-22 109.8 237 34.6
Sc21g0005110 Simmondsia chinensis HOM05D001537 ORTHO05D002595 6.4e-22 109.0 237 35.9
CAN.G438.67 Capsicum annuum HOM05D001537 ORTHO05D002595 1.4e-21 107.8 285 31.9
DCAR_016222 Daucus carota HOM05D001537 ORTHO05D002595 3.2e-21 106.7 219 37.9
TPR.G37208 Trifolium pratense HOM05D001537 ORTHO05D002595 3.2e-21 106.7 204 38.2
Ca_01115_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 4.2e-21 106.3 191 40.8
Peaxi162Scf00015g00339 Petunia axillaris HOM05D001537 ORTHO05D002595 1.6e-20 104.4 210 35.7
EL10Ac9g22000 Beta vulgaris HOM05D001537 ORTHO05D002595 2.1e-20 104.0 238 35.3
TPR.G37206 Trifolium pratense HOM05D001537 ORTHO05D002595 2.1e-20 104.0 200 38.0
Lsat_1_v5_gn_4_103661 Lactuca sativa HOM05D001537 ORTHO05D002595 3.5e-20 103.2 191 39.3
SalBow2G3154 Salvia bowleyana HOM05D001537 ORTHO05D002595 7.9e-20 102.1 207 37.7
Aqoxy7G03786 Aquilegia oxysepala HOM05D001537 ORTHO05D002595 1.0e-19 101.7 230 36.5
HanXRQChr09g0275231 Helianthus annuus HOM05D001537 ORTHO05D002595 1.8e-19 100.9 175 40.6
Cc04_g03430 Coffea canephora HOM05D001537 ORTHO05D002595 2.3e-19 100.5 234 34.2
ECA232G0385 Erigeron canadensis HOM05D001537 ORTHO05D002595 3.0e-19 100.1 95 56.8
Oeu063977.2 Olea europaea HOM05D001537 ORTHO05D002595 5.1e-19 99.4 219 37.4
Nitab4.5_0005851g0070 Nicotiana tabacum HOM05D001537 ORTHO05D002595 5.6e-18 95.9 225 35.1
Migut.I00865 Erythranthe guttata HOM05D001537 ORTHO05D002595 1.6e-17 94.4 226 35.4
SGA_v2.0_scaffold37G14822 Striga asiatica HOM05D001537 ORTHO05D002595 2.8e-17 93.6 141 44.0
AUR62016445 Chenopodium quinoa HOM05D001537 ORTHO05D002595 3.7e-17 93.2 242 31.0
MSTRG.11077 Avicennia marina HOM05D001537 ORTHO05D002595 4.8e-17 92.8 225 34.2
Lj3g0003193 Lotus japonicus HOM05D001537 ORTHO05D002595 4.0e-16 89.7 175 41.1
Ciclev10024801m.g Citrus clementina HOM05D001537 ORTHO05D002595 2.0e-15 87.4 167 35.9
Sabra01G0146700 Salix brachista HOM05D001537 ORTHO05D002595 2.6e-15 87.0 156 38.5
Thhalv10018072m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 5.8e-15 85.9 214 31.3
AUR62011630 Chenopodium quinoa HOM05D001537 ORTHO05D002595 1.7e-14 84.3 265 29.8
Sp5g35730 Schrenkiella parvula HOM05D001537 ORTHO05D002595 1.1e-13 81.6 197 34.0
Hund06612 Selenicereus undatus HOM05D001537 ORTHO05D002595 1.1e-13 81.6 204 35.3
C06p28800 Brassica napus HOM05D001537 ORTHO05D002595 2.5e-13 80.5 91 50.5
HPP92_022952 Vanilla planifolia HOM05D001537 ORTHO05D002595 2.5e-13 80.5 104 46.2
Aa31LG4G260 Aethionema arabicum HOM05D001537 ORTHO05D002595 4.2e-13 79.7 218 32.1
ATR1120G122 Amborella trichopoda HOM05D001537 ORTHO05D002595 7.1e-13 79.0 164 36.0
THA.LOC104812517 Tarenaya hassleriana HOM05D001537 ORTHO05D002595 1.2e-12 78.2 232 31.5
AL2G41590 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 1.6e-12 77.8 92 47.8
C06p54320 Brassica napus HOM05D001537 ORTHO05D002595 1.6e-12 77.8 192 32.3
BolC6t40443H Brassica oleracea HOM05D001537 ORTHO05D002595 1.6e-12 77.8 192 32.3
Carub.0002s2755 Capsella rubella HOM05D001537 ORTHO05D002595 3.5e-12 76.6 181 34.3
Ah.01g021390 Amaranthus hybridus HOM05D001537 ORTHO05D002595 1.3e-11 74.7 64 65.6
SHI10919 Sapria himalayana HOM05D001537 ORTHO05D013980 1.3e-11 74.7 171 33.3
BcaC08g47564 Brassica carinata HOM05D001537 ORTHO05D002595 3.9e-11 73.2 179 33.0
unitig_62.g23603 Utricularia gibba HOM05D001537 ORTHO05D002595 3.9e-11 73.2 162 34.0
CARHR074520 Cardamine hirsuta HOM05D001537 ORTHO05D002595 5.1e-11 72.8 96 43.8
A07p26410 Brassica napus HOM05D001537 ORTHO05D002595 1.9e-10 70.9 87 47.1
BraA07t30285Z Brassica rapa HOM05D001537 ORTHO05D002595 1.9e-10 70.9 87 47.1
BcaC08g45279 Brassica carinata HOM05D001537 ORTHO05D013980 2.5e-10 70.5 81 49.4
Thecc.06G087400 Theobroma cacao HOM05D001537 ORTHO05D002595 2.8e-09 67.0 149 32.9
A07p45470 Brassica napus HOM05D001537 ORTHO05D013980 6.2e-09 65.9 89 44.9
CSS0043109 Camellia sinensis var. sinensis HOM05D031035 ORTHO05D013980 1.1e-08 65.1 166 31.9
CSS0017980 Camellia sinensis var. sinensis HOM05D031035 ORTHO05D013980 5.3e-08 62.8 166 33.7
Pp3c18_12550 Physcomitrium patens HOM05D001537 ORTHO05D002595 5.3e-08 62.8 108 32.4
Cpa.g.c31806.2 Carica papaya HOM05D008736 ORTHO05D010193 1.2e-07 61.6 147 30.6
QL05p023817 Quercus lobata HOM05D000011 ORTHO05D000018 2.6e-07 60.5 116 35.3
Mapoly0076s0066 Marchantia polymorpha HOM05D001537 ORTHO05D002595 2.9e-06 57.0 101 35.6


User provided reference genes

Program Settings