Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p075342 Quercus lobata HOM05D006076 ORTHO05D007506 5.5e-203 710.7 340 100.0
CiPaw.11G066500 Carya illinoinensis HOM05D006076 ORTHO05D007506 1.2e-165 586.6 354 80.2
Cfa019426 Carpinus fangiana HOM05D006076 ORTHO05D007506 1.1e-150 537.0 324 79.3
Dinv19079 Davidia involucrata HOM05D006076 ORTHO05D007506 8.6e-148 527.3 360 72.5
MD15G1436000 Malus domestica HOM05D006076 ORTHO05D007506 8.6e-148 527.3 361 72.0
MD08G1242300 Malus domestica HOM05D006076 ORTHO05D007506 1.5e-147 526.6 357 72.8
Rhsim10G0185200 Rhododendron simsii HOM05D006076 ORTHO05D007506 2.1e-146 522.7 363 72.2
TWI74G1437 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 2.3e-145 519.2 360 70.3
Lalb_Chr17g0345871 Lupinus albus HOM05D006076 ORTHO05D007506 8.9e-145 517.3 353 69.4
Sabra17G0117900 Salix brachista HOM05D006076 ORTHO05D007506 1.2e-144 516.9 348 71.6
CSS0031022 Camellia sinensis var. sinensis HOM05D006076 ORTHO05D007506 1.5e-144 516.5 370 71.1
Thecc.04G060400 Theobroma cacao HOM05D006076 ORTHO05D007506 2.6e-144 515.8 357 69.5
Potri.017G139700 Populus trichocarpa HOM05D006076 ORTHO05D007506 5.7e-144 514.6 348 71.6
TWI53G1019 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 7.5e-144 514.2 359 69.6
LjContig00141g0009861 Lotus japonicus HOM05D006076 ORTHO05D007506 4.9e-143 511.5 352 69.9
GSVIVG01013049001 Vitis vinifera HOM05D006076 ORTHO05D007506 9.2e-142 507.3 353 70.8
FAN08G1959 Fragaria x ananassa HOM05D006076 ORTHO05D007506 1.6e-141 506.5 358 70.9
Psat2g042920 Pisum sativum HOM05D006076 ORTHO05D007506 7.8e-141 504.2 353 70.0
RcHm_v2.0_Chr7g0220631 Rosa chinensis HOM05D006076 ORTHO05D007506 1.0e-140 503.8 357 70.6
Ciclev10005246m.g Citrus clementina HOM05D006076 ORTHO05D007506 1.3e-140 503.4 356 69.7
FAN04G0499 Fragaria x ananassa HOM05D006076 ORTHO05D007506 1.7e-140 503.1 358 70.9
arahy.Tifrunner.gnm1.ann1.19NIP2 Arachis hypogaea HOM05D006076 ORTHO05D007506 2.9e-140 502.3 351 68.9
CANSAT11G2533 Cannabis sativa HOM05D006076 ORTHO05D007506 2.9e-140 502.3 360 67.8
TAR629G1722 Trochodendron aralioides HOM05D006076 ORTHO05D007506 2.9e-140 502.3 363 69.4
Phvul.008G241000 Phaseolus vulgaris HOM05D006076 ORTHO05D007506 3.9e-140 501.9 351 69.5
TPR.G5335 Trifolium pratense HOM05D006076 ORTHO05D007506 6.6e-140 501.1 353 68.6
Manes.01G123200 Manihot esculenta HOM05D006076 ORTHO05D007506 8.6e-140 500.7 361 69.5
RcHm_v2.0_Chr2g0106631 Rosa chinensis HOM05D006076 ORTHO05D007506 8.6e-140 500.7 345 72.2
FvH4_5g28670 Fragaria vesca HOM05D006076 ORTHO05D007506 1.1e-139 500.4 350 71.7
FAN18G0334 Fragaria x ananassa HOM05D006076 ORTHO05D007506 1.1e-139 500.4 350 71.4
arahy.Tifrunner.gnm1.ann1.T03I92 Arachis hypogaea HOM05D006076 ORTHO05D007506 1.9e-139 499.6 357 67.8
Nitab4.5_0002648g0050 Nicotiana tabacum HOM05D006076 ORTHO05D007506 1.2e-138 496.9 359 67.7
Hma1.2p1_0034F.1_g021380 Hydrangea macrophylla HOM05D006076 ORTHO05D007506 1.6e-138 496.5 358 68.4
Glyma.14G210200 Glycine max HOM05D006076 ORTHO05D007506 4.7e-138 495.0 351 69.5
Eucgr.J01641 Eucalyptus grandis HOM05D006076 ORTHO05D007506 1.8e-137 493.0 362 66.6
Nitab4.5_0000005g0100 Nicotiana tabacum HOM05D006076 ORTHO05D007506 1.8e-137 493.0 359 67.4
DCAR_003407 Daucus carota HOM05D006076 ORTHO05D007506 1.5e-136 490.0 359 67.1
Actinidia17164 Actinidia chinensis HOM05D006076 ORTHO05D007506 4.4e-136 488.4 362 68.5
Ca_05760_v3 Cicer arietinum L. HOM05D006076 ORTHO05D007506 5.8e-136 488.0 353 67.4
Cc07_g12790 Coffea canephora HOM05D006076 ORTHO05D007506 5.8e-136 488.0 364 66.2
VMungo0647G0600 Vigna mungo HOM05D006076 ORTHO05D007506 7.5e-136 487.6 347 69.2
MSTRG.15638 Avicennia marina HOM05D006076 ORTHO05D007506 3.2e-134 482.3 356 66.9
Sopen02g011760 Solanum pennellii HOM05D006076 ORTHO05D007506 3.2e-134 482.3 359 64.6
Medtr5g076920 Medicago truncatula HOM05D006076 ORTHO05D007506 9.2e-134 480.7 364 65.7
Glyma.02G240700 Glycine max HOM05D006076 ORTHO05D007506 1.2e-133 480.3 351 68.1
COL.COLO4_20049 Corchorus olitorius HOM05D006076 ORTHO05D007506 2.0e-133 479.6 357 66.4
SGA_v2.0_scaffold115G32050 Striga asiatica HOM05D006076 ORTHO05D007506 1.3e-132 476.9 348 66.1
PSO782G3474 Papaver somniferum HOM05D006076 ORTHO05D007506 2.3e-132 476.1 363 65.3
THA.LOC104820862 Tarenaya hassleriana HOM05D006076 ORTHO05D007506 2.3e-132 476.1 351 65.2
PGR042G3996 Punica granatum HOM05D006076 ORTHO05D007506 3.0e-132 475.7 359 65.2
Gohir.D11G176000 Gossypium hirsutum HOM05D006076 ORTHO05D007506 1.5e-131 473.4 358 65.9
PSO063G3081 Papaver somniferum HOM05D006076 ORTHO05D007506 1.6e-130 469.9 363 64.7
vmacro20467 Vaccinium macrocarpon HOM05D006076 ORTHO05D007506 2.8e-130 469.2 485 53.6
Solyc02g036380.3 Solanum lycopersicum HOM05D006076 ORTHO05D007506 1.1e-129 467.2 407 57.2
HanXRQChr16g0532291 Helianthus annuus HOM05D006076 ORTHO05D007506 3.1e-129 465.7 351 66.1
Thhalv10014026m.g Eutrema salsugineum HOM05D006076 ORTHO05D007506 1.5e-128 463.4 352 64.5
AUR62004772 Chenopodium quinoa HOM05D006076 ORTHO05D007506 2.0e-128 463.0 353 66.0
Sc09g0004490 Simmondsia chinensis HOM05D006076 ORTHO05D007506 2.0e-128 463.0 355 64.5
Aqoxy3G04116 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 3.4e-128 462.2 354 64.4
SalBow5G0086 Salvia bowleyana HOM05D006076 ORTHO05D007506 1.7e-127 459.9 354 63.6
SalBow5G5467 Salvia bowleyana HOM05D006076 ORTHO05D007506 1.7e-127 459.9 354 63.6
Sp6g26940 Schrenkiella parvula HOM05D006076 ORTHO05D007506 2.2e-127 459.5 353 63.7
AL6G28370 Arabidopsis lyrata HOM05D006076 ORTHO05D007506 3.7e-127 458.8 352 63.4
AT5G17290 Arabidopsis thaliana HOM05D006076 ORTHO05D007506 3.7e-127 458.8 352 63.1
CARHR195920 Cardamine hirsuta HOM05D006076 ORTHO05D007506 8.3e-127 457.6 351 63.0
Manes.02G080800 Manihot esculenta HOM05D006076 ORTHO05D007506 1.4e-126 456.8 358 64.8
BcaC03g18547 Brassica carinata HOM05D006076 ORTHO05D007506 2.4e-126 456.1 352 62.5
Migut.K00743 Erythranthe guttata HOM05D006076 ORTHO05D007506 2.4e-126 456.1 350 66.3
EL10Ac4g08929 Beta vulgaris HOM05D006076 ORTHO05D007506 5.4e-126 454.9 352 63.6
BcaC04g18810 Brassica carinata HOM05D006076 ORTHO05D007506 1.2e-125 453.8 353 62.3
CAN.G123.2 Capsicum annuum HOM05D006076 ORTHO05D007506 1.2e-125 453.8 342 66.1
BraA02t05373Z Brassica rapa HOM05D006076 ORTHO05D007506 3.5e-125 452.2 353 62.6
C02p08950 Brassica napus HOM05D006076 ORTHO05D007506 7.8e-125 451.1 353 62.0
BolC2t06804H Brassica oleracea HOM05D006076 ORTHO05D007506 7.8e-125 451.1 353 62.0
BcaB08g36791 Brassica carinata HOM05D006076 ORTHO05D007506 1.0e-124 450.7 352 62.5
Carub.0006s1548 Capsella rubella HOM05D006076 ORTHO05D007506 1.3e-124 450.3 352 61.9
A02p04100 Brassica napus HOM05D006076 ORTHO05D007506 2.3e-124 449.5 353 62.0
BolC9t58826H Brassica oleracea HOM05D006076 ORTHO05D007506 6.6e-124 448.0 353 62.0
Duzib138G0191 Durio zibethinus HOM05D006076 ORTHO05D007506 6.6e-124 448.0 345 64.3
ClCG05G010470 Citrullus lanatus HOM05D006076 ORTHO05D007506 2.5e-123 446.0 360 63.3
Lsat_1_v5_gn_3_67061 Lactuca sativa HOM05D006076 ORTHO05D007506 2.5e-123 446.0 345 63.8
Gorai.007G188600 Gossypium raimondii HOM05D006076 ORTHO05D007506 9.5e-123 444.1 431 54.8
Oeu012318.2 Olea europaea HOM05D006076 ORTHO05D007506 1.6e-122 443.4 427 56.0
Lj4A252G57 Lonicera japonica HOM05D006076 ORTHO05D007506 2.1e-122 443.0 327 67.9
MELO3C019565.2 Cucumis melo HOM05D006076 ORTHO05D007506 4.7e-122 441.8 352 63.1
Aa31LG11G12390 Aethionema arabicum HOM05D006076 ORTHO05D007506 6.2e-122 441.4 350 60.3
BraA10t44270Z Brassica rapa HOM05D006076 ORTHO05D007506 8.1e-122 441.0 354 61.3
A10p22110 Brassica napus HOM05D006076 ORTHO05D007506 1.1e-121 440.7 354 61.3
unitig_0.g2639 Utricularia gibba HOM05D006076 ORTHO05D007506 1.4e-121 440.3 356 61.2
CsaV3_3G018020 Cucumis sativus L. HOM05D006076 ORTHO05D007506 2.0e-120 436.4 359 62.1
QL04p075158 Quercus lobata HOM05D006076 ORTHO05D007506 2.2e-119 433.0 213 99.1
RcHm_v2.0_Chr5g0080521 Rosa chinensis HOM05D006076 ORTHO05D007506 7.1e-118 427.9 299 70.9
C09p59900 Brassica napus HOM05D006076 ORTHO05D007506 1.6e-117 426.8 398 55.3
Solyc06g043140.4 Solanum lycopersicum HOM05D006076 ORTHO05D007506 7.8e-117 424.5 353 60.3
CDE04G2995 Ceratophyllum demersum HOM05D006076 ORTHO05D007506 1.5e-115 420.2 340 60.9
ATR0807G042 Amborella trichopoda HOM05D006076 ORTHO05D007506 1.4e-113 413.7 347 60.5
Atru.chr1.2153 Acer truncatum HOM05D006076 ORTHO05D007506 3.2e-110 402.5 262 72.9
ECA246G5189 Erigeron canadensis HOM05D006076 ORTHO05D000091 7.1e-110 401.4 288 66.7
Sed0003951 Sechium edule HOM05D006076 ORTHO05D007506 3.0e-108 396.0 348 58.9
Gohir.A11G169800 Gossypium hirsutum HOM05D006076 ORTHO05D007506 1.5e-107 393.7 358 58.4
Os02g0117800 Oryza sativa ssp. japonica HOM05D006076 ORTHO05D007506 1.9e-107 393.3 357 56.6
Hund22204 Selenicereus undatus HOM05D006076 ORTHO05D007506 5.6e-107 391.7 351 57.8
SEGI_25199 Sequoiadendron giganteum HOM05D006076 ORTHO05D007506 9.3e-102 374.4 381 49.6
Zm00001eb230080 Zea mays HOM05D006076 ORTHO05D007506 4.6e-101 372.1 357 52.1
Ah.05g177670 Amaranthus hybridus HOM05D006076 ORTHO05D007506 1.7e-100 370.2 319 60.5
Actinidia40417 Actinidia chinensis HOM05D006076 ORTHO05D007506 1.9e-99 366.7 245 71.8
Peaxi162Scf00294g00628 Petunia axillaris HOM05D006076 ORTHO05D007506 4.5e-96 355.5 355 54.4
Haze_08537 Corylus avellana HOM05D006076 ORTHO05D007506 9.3e-94 347.8 349 54.2
Nn4g24719 Nelumbo nucifera HOM05D006076 ORTHO05D007506 9.3e-94 347.8 296 59.1
Prupe.1G579800 Prunus persica HOM05D006076 ORTHO05D007506 5.1e-92 342.0 199 80.4
Mapoly0019s0054 Marchantia polymorpha HOM05D006076 ORTHO05D007506 9.6e-91 337.8 422 43.4
AUR62037480 Chenopodium quinoa HOM05D006076 ORTHO05D007506 1.0e-84 317.8 208 72.1
MBI06_g30602_MAGBIO Magnolia biondii HOM05D006076 ORTHO05D007506 5.1e-84 315.5 280 56.8
Pp3c4_11110 Physcomitrium patens HOM05D006076 ORTHO05D007506 1.8e-81 307.0 376 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1639 Anthoceros agrestis HOM05D006076 ORTHO05D007506 1.2e-80 304.3 401 40.9
SMO116G0154 Selaginella moellendorffii HOM05D006076 ORTHO05D007506 1.1e-78 297.7 344 43.3
Cpa.g.sc178.26 Carica papaya HOM05D006076 ORTHO05D007506 2.1e-77 293.5 157 84.1
QL04p075308 Quercus lobata HOM05D006076 ORTHO05D007506 7.4e-75 285.0 134 97.0
TAR629G0059 Trochodendron aralioides HOM05D006076 ORTHO05D007506 3.8e-63 246.1 127 87.4
HPP92_002577 Vanilla planifolia HOM05D006076 ORTHO05D007506 1.8e-57 227.3 245 49.4
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 1.8e-57 227.3 245 49.4
QL04p075364 Quercus lobata HOM05D000397 ORTHO05D007506 1.2e-56 224.6 112 99.1
Cpa.g.sc178.27 Carica papaya HOM05D006076 ORTHO05D007506 2.7e-45 186.8 155 61.9
HanXRQChr02g0046461 Helianthus annuus HOM05D006076 ORTHO05D007506 6.8e-44 182.2 198 50.5
HanXRQChr16g0508921 Helianthus annuus HOM05D006076 ORTHO05D007506 6.8e-44 182.2 197 50.8
CBR_g50474 Chara braunii HOM05D001161 ORTHO05D000497 7.0e-41 172.2 131 57.3
QL04p043726 Quercus lobata HOM05D000176 ORTHO05D007506 2.0e-40 170.6 83 92.8
QL04p075322 Quercus lobata HOM05D006076 ORTHO05D007506 1.7e-39 167.5 77 100.0
BcaNung00408 Brassica carinata HOM05D006076 ORTHO05D007506 2.3e-36 157.1 205 46.3
Aqoxy531s001 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 1.2e-27 128.3 121 56.2
Cre14.g630907 Chlamydomonas reinhardtii HOM05D006076 ORTHO05D007506 5.6e-22 109.4 224 31.7
AUR62037479 Chenopodium quinoa HOM05D006076 ORTHO05D007506 6.2e-21 105.9 120 50.8
Actinidia40416 Actinidia chinensis HOM05D006076 ORTHO05D007506 2.3e-12 77.4 94 50.0


User provided reference genes

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