Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g285400 Pisum sativum HOM05D002048 ORTHO05D023702 8.1e-39 163.3 85 100.0
Psat3g136440 Pisum sativum HOM05D002395 ORTHO05D023702 2.4e-35 151.8 84 92.9
Psat4g095200 Pisum sativum HOM05D002395 ORTHO05D023702 2.4e-35 151.8 84 92.9
Psat4g095240 Pisum sativum HOM05D002395 ORTHO05D023702 4.6e-34 147.5 84 91.7
Ca_06979_v3 Cicer arietinum L. HOM05D002048 ORTHO05D002146 4.9e-20 100.9 67 80.6
Lj5g0025981 Lotus japonicus HOM05D002048 ORTHO05D002146 3.0e-17 91.7 65 75.4
arahy.Tifrunner.gnm1.ann1.S90AI0 Arachis hypogaea HOM05D002048 ORTHO05D002146 8.7e-17 90.1 67 70.1
arahy.Tifrunner.gnm1.ann1.ZAPI4Q Arachis hypogaea HOM05D002048 ORTHO05D002146 8.7e-17 90.1 67 70.1
Psat6g017320 Pisum sativum HOM05D002048 ORTHO05D002146 1.9e-16 89.0 68 72.1
Glyma.17G233000 Glycine max HOM05D002048 ORTHO05D002146 4.3e-16 87.8 67 70.1
arahy.Tifrunner.gnm1.ann1.QJHX3I Arachis hypogaea HOM05D002048 ORTHO05D002146 5.7e-16 87.4 67 68.7
Glyma.14G089078 Glycine max HOM05D002048 ORTHO05D002146 7.4e-16 87.0 67 68.7
Phvul.001G029800 Phaseolus vulgaris HOM05D002048 ORTHO05D002146 1.3e-15 86.3 67 67.2
Lalb_Chr22g0355781 Lupinus albus HOM05D002048 ORTHO05D002146 1.8e-14 82.4 68 67.6
VMungo0647G0326 Vigna mungo HOM05D002048 ORTHO05D002146 2.0e-13 79.0 67 62.7
Psat2g118720 Pisum sativum HOM05D002048 ORTHO05D002146 1.2e-10 69.7 55 70.9
CiPaw.08G052200 Carya illinoinensis HOM05D002048 ORTHO05D002146 1.6e-10 69.3 64 57.8
Medtr1g017520 Medicago truncatula HOM05D002048 ORTHO05D002146 2.1e-10 68.9 68 57.4
QL12p038612 Quercus lobata HOM05D002048 ORTHO05D002146 4.6e-10 67.8 64 60.9
CANSAT25G3132 Cannabis sativa HOM05D002048 ORTHO05D002146 3.9e-09 64.7 67 55.2
Psat2g091080 Pisum sativum HOM05D002048 ORTHO05D002146 3.9e-09 64.7 55 65.5
Psat2g091120 Pisum sativum HOM05D002048 ORTHO05D002146 5.1e-09 64.3 55 65.5
COL.COLO4_28463 Corchorus olitorius HOM05D002048 ORTHO05D002146 1.1e-08 63.2 68 52.9
Thecc.08G084800 Theobroma cacao HOM05D002048 ORTHO05D002146 1.1e-08 63.2 68 54.4
GSVIVG01009302001 Vitis vinifera HOM05D002048 ORTHO05D002146 1.1e-08 63.2 69 59.4
Cfa013740 Carpinus fangiana HOM05D002048 ORTHO05D002146 1.5e-08 62.8 61 57.4
Eucgr.F02226 Eucalyptus grandis HOM05D002048 ORTHO05D002146 4.3e-08 61.2 69 49.3
Haze_22392 Corylus avellana HOM05D002048 ORTHO05D002146 5.7e-08 60.8 62 54.8
Haze_22400 Corylus avellana HOM05D002048 ORTHO05D002146 5.7e-08 60.8 62 54.8
Duzib116G0418 Durio zibethinus HOM05D002048 ORTHO05D002146 5.7e-08 60.8 64 54.7
Manes.18G049300 Manihot esculenta HOM05D002048 ORTHO05D002146 5.7e-08 60.8 61 54.1
Psat7g108040 Pisum sativum HOM05D003780 ORTHO05D004463 5.7e-08 60.8 59 57.6
MD08G1078500 Malus domestica HOM05D002048 ORTHO05D002146 7.4e-08 60.5 68 48.5
Prupe.1G419400 Prunus persica HOM05D002048 ORTHO05D002146 1.3e-07 59.7 66 50.0
MELO3C016837.2 Cucumis melo HOM05D002048 ORTHO05D002146 2.8e-07 58.5 61 57.4
Actinidia10220 Actinidia chinensis HOM05D002048 ORTHO05D002146 3.7e-07 58.2 63 54.0
ATR0564G474 Amborella trichopoda HOM05D002048 ORTHO05D002146 4.8e-07 57.8 65 55.4
Aqoxy6G02485 Aquilegia oxysepala HOM05D002048 ORTHO05D002146 4.8e-07 57.8 65 56.9
Potri.014G013100 Populus trichocarpa HOM05D002048 ORTHO05D002146 4.8e-07 57.8 63 52.4
vmacro21418 Vaccinium macrocarpon HOM05D002048 ORTHO05D002146 4.8e-07 57.8 63 52.4
Nn5g30660 Nelumbo nucifera HOM05D002048 ORTHO05D002146 8.2e-07 57.0 66 51.5
FvH4_2g32680 Fragaria vesca HOM05D002048 ORTHO05D002146 1.1e-06 56.6 65 49.2
FAN24G0734 Fragaria x ananassa HOM05D002048 ORTHO05D002146 1.1e-06 56.6 65 49.2
Atru.chr13.868 Acer truncatum HOM05D002048 ORTHO05D002146 1.4e-06 56.2 69 47.8
CSS0050419 Camellia sinensis var. sinensis HOM05D002048 ORTHO05D002146 1.4e-06 56.2 65 52.3
CARHR036140 Cardamine hirsuta HOM05D002048 ORTHO05D002146 1.4e-06 56.2 63 52.4
ClCG05G026560 Citrullus lanatus HOM05D002048 ORTHO05D002146 1.8e-06 55.8 61 54.1
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 1.8e-06 55.8 61 57.4
MD15G1065300 Malus domestica HOM05D002048 ORTHO05D002146 1.8e-06 55.8 68 45.6
Aa31LG7G10080 Aethionema arabicum HOM05D002048 ORTHO05D002146 3.1e-06 55.1 63 47.6
Dinv44932 Davidia involucrata HOM05D002048 ORTHO05D002146 3.1e-06 55.1 68 50.0
Sabra14G0007900 Salix brachista HOM05D002048 ORTHO05D002146 3.1e-06 55.1 69 47.8
Carub.0001s3541 Capsella rubella HOM05D002048 ORTHO05D002146 4.1e-06 54.7 63 49.2
CsaV3_4G035260 Cucumis sativus L. HOM05D002048 ORTHO05D002146 5.3e-06 54.3 61 52.5
FAN20G2176 Fragaria x ananassa HOM05D002048 ORTHO05D002146 5.3e-06 54.3 66 50.0
TAR381G0254 Trochodendron aralioides HOM05D002048 ORTHO05D002146 5.3e-06 54.3 64 53.1
Thhalv10011212m.g Eutrema salsugineum HOM05D002048 ORTHO05D002146 6.9e-06 53.9 63 47.6
Nitab4.5_0005762g0010 Nicotiana tabacum HOM05D002048 ORTHO05D002146 6.9e-06 53.9 61 50.8
AUR62022344 Chenopodium quinoa HOM05D002048 ORTHO05D002146 9.1e-06 53.5 70 50.0


User provided reference genes

Program Settings