Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g103400 Pisum sativum HOM05D004093 ORTHO05D004981 1.7e-54 215.7 106 100.0
Atru.chr5.2252 Acer truncatum HOM05D004093 ORTHO05D004981 3.3e-13 78.6 76 55.3
Hma1.2p1_1758F.1_g301170 Hydrangea macrophylla HOM05D004093 ORTHO05D004981 5.6e-13 77.8 91 50.5
Lalb_Chr16g0387791 Lupinus albus HOM05D004093 ORTHO05D004981 1.2e-12 76.6 69 60.9
Dinv09528 Davidia involucrata HOM05D004093 ORTHO05D004981 2.1e-12 75.9 69 60.9
Ca_17297_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 2.8e-12 75.5 69 59.4
Ca_17304_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 2.8e-12 75.5 69 59.4
Glyma.08G043900 Glycine max HOM05D004093 ORTHO05D004981 2.8e-12 75.5 69 59.4
Glyma.05G236700 Glycine max HOM05D004093 ORTHO05D004981 3.6e-12 75.1 69 58.0
Phvul.002G318600 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 3.6e-12 75.1 69 58.0
Psat0s8864g0080 Pisum sativum HOM05D004093 ORTHO05D004981 3.6e-12 75.1 35 100.0
Prupe.8G151800 Prunus persica HOM05D004093 ORTHO05D004981 3.6e-12 75.1 69 58.0
VMungo0251G2341 Vigna mungo HOM05D004093 ORTHO05D004981 3.6e-12 75.1 69 58.0
Aa31sc178G40 Aethionema arabicum HOM05D004093 ORTHO05D004981 6.2e-12 74.3 108 43.5
CANSAT25G3849 Cannabis sativa HOM05D004093 ORTHO05D004981 6.2e-12 74.3 76 52.6
MD10G1112200 Malus domestica HOM05D004093 ORTHO05D004981 6.2e-12 74.3 68 60.3
Manes.07G052300 Manihot esculenta HOM05D004093 ORTHO05D004981 6.2e-12 74.3 69 58.0
PGR119G0904 Punica granatum HOM05D004093 ORTHO05D004981 6.2e-12 74.3 69 58.0
GSVIVG01037036001 Vitis vinifera HOM05D004093 ORTHO05D004981 6.2e-12 74.3 69 59.4
Dinv16064 Davidia involucrata HOM05D004093 ORTHO05D004981 8.1e-12 73.9 69 59.4
ECA233G6085 Erigeron canadensis HOM05D004093 ORTHO05D004981 8.1e-12 73.9 69 58.0
FvH4_2g03040 Fragaria vesca HOM05D004093 ORTHO05D004981 8.1e-12 73.9 71 56.3
FAN15G0664 Fragaria x ananassa HOM05D004093 ORTHO05D004981 8.1e-12 73.9 71 56.3
FAN24G1787 Fragaria x ananassa HOM05D004093 ORTHO05D004981 8.1e-12 73.9 71 56.3
HanXRQChr03g0069101 Helianthus annuus HOM05D004093 ORTHO05D004981 8.1e-12 73.9 69 58.0
HanXRQChr16g0510261 Helianthus annuus HOM05D004093 ORTHO05D004981 8.1e-12 73.9 69 58.0
TPR.G32673 Trifolium pratense HOM05D004093 ORTHO05D004981 8.1e-12 73.9 69 58.0
Ah.05g177500 Amaranthus hybridus HOM05D004093 ORTHO05D004981 1.1e-11 73.6 76 52.6
AT4G33760 Arabidopsis thaliana HOM05D004093 ORTHO05D004981 1.1e-11 73.6 108 42.6
EL10Ac1g00697 Beta vulgaris HOM05D004093 ORTHO05D004981 1.1e-11 73.6 76 51.3
ClCG10G009970 Citrullus lanatus HOM05D004093 ORTHO05D004981 1.1e-11 73.6 68 58.8
MELO3C018029.2 Cucumis melo HOM05D004093 ORTHO05D004981 1.1e-11 73.6 68 58.8
CsaV3_4G000020 Cucumis sativus L. HOM05D004093 ORTHO05D004981 1.1e-11 73.6 68 58.8
Medtr4g120810 Medicago truncatula HOM05D004093 ORTHO05D004981 1.1e-11 73.6 69 58.0
Medtr8g104740 Medicago truncatula HOM05D004093 ORTHO05D004981 1.1e-11 73.6 69 58.0
arahy.Tifrunner.gnm1.ann1.14EEYB Arachis hypogaea HOM05D004093 ORTHO05D004981 1.4e-11 73.2 69 58.0
arahy.Tifrunner.gnm1.ann1.K8EMZF Arachis hypogaea HOM05D004093 ORTHO05D004981 1.4e-11 73.2 69 58.0
CiPaw.05G021800 Carya illinoinensis HOM05D004093 ORTHO05D004981 1.4e-11 73.2 69 58.0
CiPaw.06G163100 Carya illinoinensis HOM05D004093 ORTHO05D004981 1.4e-11 73.2 69 58.0
Ciclev10028050m.g Citrus clementina HOM05D004093 ORTHO05D004981 1.4e-11 73.2 71 54.9
Thhalv10024609m.g Eutrema salsugineum HOM05D004093 ORTHO05D004981 1.4e-11 73.2 108 41.7
Cc02_g20210 Coffea canephora HOM05D004093 ORTHO05D004981 1.8e-11 72.8 65 55.4
Peaxi162Scf00016g03248 Petunia axillaris HOM05D004093 ORTHO05D004981 1.8e-11 72.8 69 58.0
SMO364G0944 Selaginella moellendorffii HOM05D004093 ORTHO05D004981 1.8e-11 72.8 71 53.5
THA.LOC104807205 Tarenaya hassleriana HOM05D004093 ORTHO05D004981 1.8e-11 72.8 91 48.4
AL7G17710 Arabidopsis lyrata HOM05D004093 ORTHO05D004981 2.3e-11 72.4 108 42.6
BcaC09g52186 Brassica carinata HOM05D004093 ORTHO05D004981 2.3e-11 72.4 108 41.7
BcaNung04674 Brassica carinata HOM05D004093 ORTHO05D004981 2.3e-11 72.4 108 41.7
A01p04580 Brassica napus HOM05D004093 ORTHO05D004981 2.3e-11 72.4 108 41.7
C01p04970 Brassica napus HOM05D004093 ORTHO05D004981 2.3e-11 72.4 108 41.7
BolC1t00478H Brassica oleracea HOM05D004093 ORTHO05D004981 2.3e-11 72.4 108 41.7
BraA01t00441Z Brassica rapa HOM05D004093 ORTHO05D004981 2.3e-11 72.4 108 41.7
CSS0001341 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 2.3e-11 72.4 35 94.3
ECA240G1647 Erigeron canadensis HOM05D004093 ORTHO05D004981 2.3e-11 72.4 35 94.3
Medtr1g113700 Medicago truncatula HOM05D004093 ORTHO05D004981 2.3e-11 72.4 35 94.3
Nitab4.5_0000772g0040 Nicotiana tabacum HOM05D004093 ORTHO05D004981 2.3e-11 72.4 35 94.3
Rhsim11G0149600 Rhododendron simsii HOM05D004093 ORTHO05D004981 2.3e-11 72.4 35 94.3
vmacro01935 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 2.3e-11 72.4 35 94.3
vmacro20830 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 2.3e-11 72.4 35 94.3
BcaC01g00967 Brassica carinata HOM05D004093 ORTHO05D004981 3.1e-11 72.0 91 46.2
QL11p028820 Quercus lobata HOM05D004093 ORTHO05D004981 3.1e-11 72.0 69 58.0
Sp7g31500 Schrenkiella parvula HOM05D004093 ORTHO05D004981 3.1e-11 72.0 91 46.2
SGA_v2.0_scaffold219G42544 Striga asiatica HOM05D004093 ORTHO05D004981 3.1e-11 72.0 35 91.4
TWI14G0771 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 3.1e-11 72.0 69 58.0
TWI59G0012 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 3.1e-11 72.0 67 59.7
Duzib052G0943 Durio zibethinus HOM05D004093 ORTHO05D004981 4.0e-11 71.6 72 51.4
RcHm_v2.0_Chr6g0247831 Rosa chinensis HOM05D004093 ORTHO05D004981 4.0e-11 71.6 69 55.1
A08p17410 Brassica napus HOM05D004093 ORTHO05D004981 5.2e-11 71.2 35 88.6
A08p17440 Brassica napus HOM05D004093 ORTHO05D004981 5.2e-11 71.2 35 88.6
CDE04G3016 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 5.2e-11 71.2 70 55.7
FAN27G3135 Fragaria x ananassa HOM05D004093 ORTHO05D004981 5.2e-11 71.2 74 55.4
Lj4g0018571 Lotus japonicus HOM05D004093 ORTHO05D004981 5.2e-11 71.2 35 91.4
Oeu018200.1 Olea europaea HOM05D004093 ORTHO05D004981 5.2e-11 71.2 72 52.8
BcaB03g11876 Brassica carinata HOM05D004093 ORTHO05D004981 6.8e-11 70.9 35 88.6
C03p86430 Brassica napus HOM05D004093 ORTHO05D004981 6.8e-11 70.9 35 88.6
BolC3t20936H Brassica oleracea HOM05D004093 ORTHO05D004981 6.8e-11 70.9 35 88.6
Gohir.A01G180900 Gossypium hirsutum HOM05D004093 ORTHO05D004981 6.8e-11 70.9 72 51.4
Gohir.D01G172000 Gossypium hirsutum HOM05D004093 ORTHO05D004981 6.8e-11 70.9 72 51.4
Gorai.002G213600 Gossypium raimondii HOM05D004093 ORTHO05D004981 6.8e-11 70.9 72 51.4
Lsat_1_v5_gn_9_113901 Lactuca sativa HOM05D004093 ORTHO05D004981 6.8e-11 70.9 69 56.5
Thecc.02G031600 Theobroma cacao HOM05D004093 ORTHO05D004981 6.8e-11 70.9 71 52.1
unitig_62.g23638 Utricularia gibba HOM05D004093 ORTHO05D004981 6.8e-11 70.9 35 88.6
CSS0016143 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 8.9e-11 70.5 45 75.6
Cfa004713 Carpinus fangiana HOM05D004093 ORTHO05D004981 8.9e-11 70.5 69 56.5
Eucgr.I02505 Eucalyptus grandis HOM05D004093 ORTHO05D004981 8.9e-11 70.5 76 52.6
Medtr4g052070 Medicago truncatula HOM05D004093 ORTHO05D004981 8.9e-11 70.5 35 88.6
Potri.001G289001 Populus trichocarpa HOM05D004093 ORTHO05D004981 8.9e-11 70.5 69 55.1
Potri.009G084300 Populus trichocarpa HOM05D004093 ORTHO05D004981 8.9e-11 70.5 69 55.1
Sabra09G0065000 Salix brachista HOM05D004093 ORTHO05D004981 8.9e-11 70.5 69 55.1
TAR159G0001 Trochodendron aralioides HOM05D004093 ORTHO05D004981 8.9e-11 70.5 35 94.3
Actinidia04397 Actinidia chinensis HOM05D004093 ORTHO05D004981 1.2e-10 70.1 69 53.6
CSS0011495 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 1.2e-10 70.1 35 91.4
ECA233G4634 Erigeron canadensis HOM05D004093 ORTHO05D004981 1.2e-10 70.1 69 55.1
Sed0011100 Sechium edule HOM05D004093 ORTHO05D004981 1.2e-10 70.1 54 64.8
Sed0024148 Sechium edule HOM05D004093 ORTHO05D004981 1.2e-10 70.1 68 57.4
MSTRG.27768 Avicennia marina HOM05D004093 ORTHO05D004981 1.5e-10 69.7 65 55.4
Carub.0007s0667 Capsella rubella HOM05D004093 ORTHO05D004981 1.5e-10 69.7 69 55.1
CAN.G606.83 Capsicum annuum HOM05D004093 ORTHO05D004981 1.5e-10 69.7 35 91.4
Migut.N01121 Erythranthe guttata HOM05D004093 ORTHO05D004981 1.5e-10 69.7 68 55.9
Solyc01g106740.4 Solanum lycopersicum HOM05D004093 ORTHO05D004981 1.5e-10 69.7 35 91.4
Sopen01g049060 Solanum pennellii HOM05D004093 ORTHO05D004981 1.5e-10 69.7 35 91.4
CDE07G1203 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 2.0e-10 69.3 75 49.3
MBI16_g34665_MAGBIO Magnolia biondii HOM05D004093 ORTHO05D004981 2.0e-10 69.3 35 91.4
Oeu037299.1 Olea europaea HOM05D004093 ORTHO05D004981 2.0e-10 69.3 72 51.4
Phvul.011G054700 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 2.0e-10 69.3 35 88.6
Pp3c20_5000 Physcomitrium patens HOM05D004093 ORTHO05D004981 2.0e-10 69.3 35 85.7
SEGI_31310 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 2.0e-10 69.3 72 47.2
Aqoxy2G01432 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 2.6e-10 68.9 35 88.6
Lj5C222T15 Lonicera japonica HOM05D004093 ORTHO05D004981 2.6e-10 68.9 35 91.4
AagrBONN_evm.TU.Sc2ySwM_117.2705 Anthoceros agrestis HOM05D004093 ORTHO05D004981 3.4e-10 68.6 35 91.4
AagrBONN_evm.TU.Sc2ySwM_117.2710 Anthoceros agrestis HOM05D004093 ORTHO05D004981 3.4e-10 68.6 35 91.4
COL.COLO4_17799 Corchorus olitorius HOM05D004093 ORTHO05D004981 4.4e-10 68.2 67 53.7
PSO210G2081 Papaver somniferum HOM05D004093 ORTHO05D004981 5.8e-10 67.8 35 91.4
Sc20g0001830 Simmondsia chinensis HOM05D004093 ORTHO05D004981 7.6e-10 67.4 69 58.0
Aa31LG9G5210 Aethionema arabicum HOM05D004093 ORTHO05D004981 9.9e-10 67.0 60 63.3
ATR0767G039 Amborella trichopoda HOM05D004093 ORTHO05D004981 9.9e-10 67.0 71 53.5
Aqoxy7G02734 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 1.3e-09 66.6 50 66.0
AUR62013810 Chenopodium quinoa HOM05D004093 ORTHO05D004981 1.3e-09 66.6 69 53.6
MCO14G538 Micromonas commoda HOM05D004093 ORTHO05D004981 2.2e-09 65.9 69 50.7
PSO447G0184 Papaver somniferum HOM05D004093 ORTHO05D004981 2.2e-09 65.9 34 91.2
AUR62023346 Chenopodium quinoa HOM05D004093 ORTHO05D004981 2.9e-09 65.5 35 88.6
Cre09.g390986 Chlamydomonas reinhardtii HOM05D004093 ORTHO05D004981 4.9e-09 64.7 33 87.9
CBR_g7978 Chara braunii HOM05D004093 ORTHO05D004981 8.4e-09 63.9 35 82.9
Mapoly0029s0082 Marchantia polymorpha HOM05D004093 ORTHO05D004981 1.9e-08 62.8 35 85.7
HPP92_001209 Vanilla planifolia HOM05D004093 ORTHO05D004981 4.1e-08 61.6 68 48.5
Nn6g32059 Nelumbo nucifera HOM05D004093 ORTHO05D004981 1.2e-07 60.1 35 77.1
PRCOL_00006371 Prasinoderma coloniale HOM05D004093 ORTHO05D004981 1.3e-06 56.6 65 47.7
Hund17142 Selenicereus undatus HOM05D004093 ORTHO05D004981 3.9e-06 55.1 28 89.3


User provided reference genes

Program Settings