Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 4.4e-120 434.9 257 100.0
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 3.3e-91 339.0 258 85.3
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 6.8e-89 331.3 260 82.7
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 1.1e-83 313.9 259 78.8
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 1.5e-83 313.5 256 80.1
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.8e-82 309.3 261 77.8
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 8.1e-82 307.8 256 77.0
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 6.8e-81 304.7 267 73.8
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 8.9e-81 304.3 256 76.6
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.9e-79 299.3 256 76.6
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 3.7e-79 298.9 255 76.1
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.1e-78 297.4 254 74.4
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 1.9e-78 296.6 262 72.9
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 2.4e-78 296.2 256 74.6
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.2e-78 295.8 261 73.6
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 3.2e-78 295.8 258 76.0
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 5.4e-78 295.0 261 74.7
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 7.1e-78 294.7 260 74.2
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 2.1e-77 293.1 256 74.6
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 2.7e-77 292.7 262 73.3
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 3.5e-77 292.4 256 74.2
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 3.5e-77 292.4 260 74.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.5e-77 292.4 259 74.1
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.5e-77 292.4 252 75.0
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 7.8e-77 291.2 252 74.6
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 1.0e-76 290.8 261 74.3
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 1.0e-76 290.8 259 75.7
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 3.0e-76 289.3 251 73.7
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 5.1e-76 288.5 262 72.1
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 1.1e-75 287.3 259 73.0
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 1.9e-75 286.6 287 67.6
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.3e-75 285.8 262 72.1
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 7.3e-75 284.6 261 72.8
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 1.2e-74 283.9 259 72.6
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.6e-74 283.5 257 72.8
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.1e-74 283.1 259 72.6
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 2.8e-74 282.7 249 74.3
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 2.8e-74 282.7 255 73.3
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.8e-74 282.7 262 71.0
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 3.6e-74 282.3 260 71.5
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 8.1e-74 281.2 274 70.1
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.1e-73 280.8 264 72.0
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 1.1e-73 280.8 175 99.4
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 1.4e-73 280.4 255 71.0
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 1.8e-73 280.0 261 71.6
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 2.3e-73 279.6 260 72.3
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 2.3e-73 279.6 261 69.7
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.3e-73 279.6 261 71.6
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 3.1e-73 279.3 261 71.3
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 5.2e-73 278.5 261 70.5
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.2e-72 277.3 268 69.0
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 1.5e-72 276.9 250 71.6
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 1.5e-72 276.9 250 71.6
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 1.5e-72 276.9 268 69.4
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 2.0e-72 276.6 259 69.9
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 2.0e-72 276.6 256 71.5
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 2.6e-72 276.2 270 68.5
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 7.6e-72 274.6 259 71.0
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 9.9e-72 274.2 258 68.6
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 9.9e-72 274.2 254 70.5
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 9.9e-72 274.2 260 70.4
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.3e-71 273.9 255 70.6
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 1.3e-71 273.9 259 71.4
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.7e-71 273.5 259 69.9
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.7e-71 273.5 253 70.8
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 1.7e-71 273.5 256 73.4
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.7e-71 273.5 264 70.5
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.7e-71 273.5 253 70.4
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 2.2e-71 273.1 253 71.1
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.2e-71 273.1 255 70.2
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 2.2e-71 273.1 258 69.8
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.9e-71 272.7 256 70.7
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 2.9e-71 272.7 258 70.2
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 3.8e-71 272.3 259 69.5
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.9e-71 271.9 256 70.7
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 6.4e-71 271.6 262 69.5
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 6.4e-71 271.6 263 70.3
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 6.4e-71 271.6 257 68.5
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 8.4e-71 271.2 258 69.0
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 8.4e-71 271.2 253 70.4
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 8.4e-71 271.2 257 68.9
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 8.4e-71 271.2 258 69.0
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-70 270.8 253 70.0
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 1.1e-70 270.8 253 70.0
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.1e-70 270.8 255 69.8
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 1.4e-70 270.4 255 69.8
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 1.4e-70 270.4 255 69.8
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.9e-70 270.0 216 78.7
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 2.4e-70 269.6 272 68.0
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.4e-70 269.6 256 69.9
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 4.1e-70 268.9 256 70.3
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 5.4e-70 268.5 262 69.5
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.4e-70 268.5 264 60.6
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 7.1e-70 268.1 260 68.8
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 9.2e-70 267.7 255 69.0
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 9.2e-70 267.7 257 69.6
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 9.2e-70 267.7 253 69.6
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.2e-69 267.3 250 70.0
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.2e-69 267.3 255 68.6
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.2e-69 267.3 255 68.6
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 1.2e-69 267.3 257 69.6
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 1.2e-69 267.3 253 69.6
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.2e-69 267.3 257 66.9
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 1.6e-69 266.9 258 68.2
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.6e-69 266.9 256 69.9
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 2.1e-69 266.5 259 69.1
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 2.1e-69 266.5 257 69.6
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 2.1e-69 266.5 219 75.3
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.1e-69 266.5 261 68.6
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 3.5e-69 265.8 246 73.2
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.5e-69 265.8 257 68.1
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.5e-69 265.8 258 67.8
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 6.0e-69 265.0 250 68.8
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 6.0e-69 265.0 256 69.1
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.0e-69 265.0 260 67.7
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 7.8e-69 264.6 257 68.9
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 7.8e-69 264.6 257 68.9
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 7.8e-69 264.6 259 68.0
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.0e-68 264.2 257 66.9
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 1.0e-68 264.2 242 70.7
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 1.0e-68 264.2 260 68.5
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.3e-68 263.8 189 86.2
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 1.3e-68 263.8 259 67.2
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 2.3e-68 263.1 257 68.5
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 3.0e-68 262.7 255 67.8
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 3.9e-68 262.3 266 66.2
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 8.6e-68 261.2 262 67.6
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.1e-67 260.8 244 70.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 1.1e-67 260.8 257 70.0
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.5e-67 260.4 257 68.1
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.5e-67 260.4 262 66.8
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.9e-67 260.0 254 67.7
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.9e-67 260.0 250 70.0
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 1.9e-67 260.0 260 64.6
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 1.2e-66 257.3 316 60.1
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 8.1e-66 254.6 256 67.6
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-65 254.2 210 75.7
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 4.0e-65 252.3 262 67.2
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 8.9e-65 251.1 238 73.1
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 5.8e-64 248.4 236 68.2
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 9.9e-64 247.7 256 66.8
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.3e-63 247.3 188 69.1
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 1.4e-62 243.8 251 70.5
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.3e-60 237.3 189 76.7
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.7e-60 236.9 190 79.5
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 1.7e-60 236.9 243 63.4
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 9.6e-59 231.1 252 64.3
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.8e-58 229.6 191 71.7
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.2e-56 224.2 203 67.0
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.5e-56 223.8 163 85.9
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 2.0e-56 223.4 268 61.2
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 4.2e-54 215.7 188 61.7
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 4.2e-54 215.7 163 82.2
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.1e-51 207.6 192 65.1
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 2.8e-50 203.0 248 53.6
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.6e-48 196.4 256 50.0
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 3.4e-48 196.1 189 55.0
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 4.5e-48 195.7 251 51.0
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 4.9e-47 192.2 261 58.6
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 4.9e-47 192.2 261 58.6
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.0e-39 167.9 200 63.5
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 4.9e-39 165.6 188 67.0
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 7.9e-37 158.3 104 79.8
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 1.6e-34 150.6 191 51.3
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 9.0e-33 144.8 206 41.7
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 2.5e-30 136.7 129 65.1
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 9.3e-30 134.8 85 78.8
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 2.1e-29 133.7 84 77.4
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 4.3e-27 125.9 108 70.4
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 1.2e-24 117.9 81 71.6
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 1.3e-23 114.4 82 69.5
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 1.2e-21 107.8 81 72.8
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.6e-19 100.1 55 89.1
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 6.3e-18 95.5 150 53.3
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.4e-17 94.4 146 53.4
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.2e-16 91.3 56 75.0
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 7.7e-16 88.6 106 65.1
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.8e-15 86.3 55 72.7
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 5.0e-15 85.9 83 77.1
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 6.1e-13 79.0 122 44.3
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 3.8e-07 59.7 87 34.5


User provided reference genes

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