Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g029560 Pisum sativum HOM05D002170 ORTHO05D007478 2.8e-216 755.0 377 100.0
TPR.G22320 Trifolium pratense HOM05D002170 ORTHO05D007478 1.8e-199 699.1 374 92.8
Ca_25357_v3 Cicer arietinum L. HOM05D002170 ORTHO05D007478 3.2e-196 688.3 375 91.5
Medtr6g071210 Medicago truncatula HOM05D002170 ORTHO05D007478 1.2e-195 686.4 374 91.2
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 1.6e-195 686.0 376 91.0
Lj2g0009559 Lotus japonicus HOM05D002170 ORTHO05D007478 6.1e-195 684.1 374 90.9
Glyma.07G105400 Glycine max HOM05D002170 ORTHO05D007478 2.3e-194 682.2 374 90.1
Phvul.004G148000 Phaseolus vulgaris HOM05D002170 ORTHO05D007478 1.5e-193 679.5 375 89.9
Glyma.09G172700 Glycine max HOM05D002170 ORTHO05D007478 2.5e-193 678.7 374 90.1
arahy.Tifrunner.gnm1.ann1.DTQ5EB Arachis hypogaea HOM05D002170 ORTHO05D007478 8.2e-192 673.7 377 88.6
Lalb_Chr14g0370711 Lupinus albus HOM05D002170 ORTHO05D007478 4.1e-191 671.4 376 89.4
arahy.Tifrunner.gnm1.ann1.U6RNCV Arachis hypogaea HOM05D002170 ORTHO05D007478 1.5e-190 669.5 377 88.3
CiPaw.16G097200 Carya illinoinensis HOM05D002170 ORTHO05D007478 5.7e-185 651.0 374 86.9
Haze_18913 Corylus avellana HOM05D002170 ORTHO05D007478 3.7e-184 648.3 374 86.1
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 4.8e-184 647.9 376 86.7
Prupe.5G236800 Prunus persica HOM05D002170 ORTHO05D007478 6.3e-184 647.5 374 85.6
ClCG04G010450 Citrullus lanatus HOM05D002170 ORTHO05D007478 2.4e-183 645.6 374 85.8
MELO3C002149.2 Cucumis melo HOM05D002170 ORTHO05D007478 2.4e-183 645.6 374 85.8
Sabra15G0025500 Salix brachista HOM05D002170 ORTHO05D007478 2.6e-182 642.1 375 85.6
CANSAT35G0706 Cannabis sativa HOM05D002170 ORTHO05D007478 3.5e-182 641.7 374 84.8
CsaV3_1G007330 Cucumis sativus L. HOM05D002170 ORTHO05D007478 5.9e-182 641.0 374 85.0
Cfa020634 Carpinus fangiana HOM05D002170 ORTHO05D007478 7.7e-182 640.6 375 85.3
QL10p031496 Quercus lobata HOM05D002170 ORTHO05D007478 1.7e-181 639.4 376 84.6
Gohir.A09G175200 Gossypium hirsutum HOM05D002170 ORTHO05D007478 8.5e-181 637.1 346 90.5
Gorai.006G191200 Gossypium raimondii HOM05D002170 ORTHO05D007478 8.5e-181 637.1 346 90.5
Potri.015G030600 Populus trichocarpa HOM05D002170 ORTHO05D007478 1.1e-180 636.7 375 85.1
Gohir.D09G169700 Gossypium hirsutum HOM05D002170 ORTHO05D007478 4.2e-180 634.8 346 90.2
Duzib068G1477 Durio zibethinus HOM05D002170 ORTHO05D007478 9.4e-180 633.6 373 84.5
Thecc.03G062200 Theobroma cacao HOM05D002170 ORTHO05D007478 9.4e-180 633.6 377 83.8
MD06G1232500 Malus domestica HOM05D002170 ORTHO05D007478 1.2e-179 633.3 375 84.5
MD14G1239300 Malus domestica HOM05D002170 ORTHO05D007478 1.6e-179 632.9 375 84.5
Duzib084G0411 Durio zibethinus HOM05D002170 ORTHO05D007478 3.6e-179 631.7 377 83.6
Cpa.g.sc3.360 Carica papaya HOM05D002170 ORTHO05D007478 1.0e-178 630.2 377 83.8
TWI81G0098 Tripterygium wilfordii HOM05D002170 ORTHO05D007478 1.0e-178 630.2 375 83.7
Sed0008892 Sechium edule HOM05D002170 ORTHO05D007478 1.4e-178 629.8 375 84.3
RcHm_v2.0_Chr7g0177971 Rosa chinensis HOM05D002170 ORTHO05D007478 4.0e-178 628.2 380 82.6
Dinv05998 Davidia involucrata HOM05D002170 ORTHO05D007478 8.8e-178 627.1 375 83.7
TAR629G0118 Trochodendron aralioides HOM05D002170 ORTHO05D007478 1.5e-177 626.3 374 84.0
Ciclev10020301m.g Citrus clementina HOM05D002170 ORTHO05D007478 2.0e-177 625.9 374 83.7
PGR044G0130 Punica granatum HOM05D002170 ORTHO05D007478 2.0e-177 625.9 376 83.2
Sc04g0004500 Simmondsia chinensis HOM05D002170 ORTHO05D007478 2.0e-177 625.9 375 83.2
FvH4_5g17680 Fragaria vesca HOM05D002170 ORTHO05D007478 7.5e-177 624.0 386 81.9
FAN18G3495 Fragaria x ananassa HOM05D002170 ORTHO05D007478 7.5e-177 624.0 386 81.9
Atru.chr9.1597 Acer truncatum HOM05D002170 ORTHO05D007478 2.2e-176 622.5 383 81.5
FAN08G0558 Fragaria x ananassa HOM05D002170 ORTHO05D007478 3.7e-176 621.7 386 81.6
FAN04G0031 Fragaria x ananassa HOM05D002170 ORTHO05D007478 4.8e-176 621.3 386 81.3
EL10Ac2g03531 Beta vulgaris HOM05D002170 ORTHO05D007478 1.1e-175 620.2 346 88.7
Manes.06G002900 Manihot esculenta HOM05D002170 ORTHO05D007478 1.8e-175 619.4 377 82.2
Eucgr.K02286 Eucalyptus grandis HOM05D002170 ORTHO05D007478 5.3e-175 617.8 345 87.8
Hma1.2p1_0471F.1_g159440 Hydrangea macrophylla HOM05D002170 ORTHO05D007478 1.6e-174 616.3 382 82.2
CSS0042449 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 2.6e-174 615.5 343 88.6
CSS0009402 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 3.5e-174 615.1 343 88.6
Actinidia09052 Actinidia chinensis HOM05D002170 ORTHO05D007478 7.7e-174 614.0 339 88.8
PSO339G1858 Papaver somniferum HOM05D002170 ORTHO05D007478 7.7e-174 614.0 380 81.3
PSO384G2182 Papaver somniferum HOM05D002170 ORTHO05D007478 7.7e-174 614.0 380 81.3
Hund22449 Selenicereus undatus HOM05D002170 ORTHO05D007478 1.0e-173 613.6 352 85.8
Ah.16g108010 Amaranthus hybridus HOM05D002170 ORTHO05D007478 1.3e-173 613.2 368 84.2
MSTRG.9351 Avicennia marina HOM05D002170 ORTHO05D007478 1.7e-173 612.8 347 85.9
ECA232G0406 Erigeron canadensis HOM05D002170 ORTHO05D007478 1.7e-173 612.8 371 81.7
vmacro17769 Vaccinium macrocarpon HOM05D002170 ORTHO05D007478 2.9e-173 612.1 341 87.7
Rhsim08G0127800 Rhododendron simsii HOM05D002170 ORTHO05D007478 1.1e-172 610.1 345 87.2
SalBow5G3655 Salvia bowleyana HOM05D002170 ORTHO05D007478 1.5e-172 609.8 344 86.6
THA.LOC104820334 Tarenaya hassleriana HOM05D002170 ORTHO05D007478 1.5e-172 609.8 345 86.7
CDE06G2490 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 2.5e-172 609.0 374 80.7
Aqoxy3G04073 Aquilegia oxysepala HOM05D002170 ORTHO05D007478 2.7e-171 605.5 344 85.2
Migut.D01219 Erythranthe guttata HOM05D002170 ORTHO05D007478 3.6e-171 605.1 344 86.6
CAN.G637.44 Capsicum annuum HOM05D002170 ORTHO05D007478 4.7e-171 604.7 377 80.9
PGSC0003DMG400033683 Solanum tuberosum HOM05D002170 ORTHO05D007478 1.0e-170 603.6 343 86.0
Sopen03g028630 Solanum pennellii HOM05D002170 ORTHO05D007478 1.4e-170 603.2 343 85.7
Atru.BG.197.p Acer truncatum HOM05D002170 ORTHO05D007478 1.8e-170 602.8 328 89.3
Lj9C416G6 Lonicera japonica HOM05D002170 ORTHO05D007478 3.0e-170 602.1 379 80.7
Carub.0003s1752 Capsella rubella HOM05D002170 ORTHO05D007478 5.2e-170 601.3 380 78.9
DCAR_003532 Daucus carota HOM05D002170 ORTHO05D007478 5.2e-170 601.3 376 80.9
HanXRQChr16g0511571 Helianthus annuus HOM05D002170 ORTHO05D007478 6.8e-170 600.9 374 81.0
Solyc03g097910.4 Solanum lycopersicum HOM05D002170 ORTHO05D007478 6.8e-170 600.9 343 85.4
Oeu023513.1 Olea europaea HOM05D002170 ORTHO05D007478 1.2e-169 600.1 345 85.8
HanXRQChr15g0492101 Helianthus annuus HOM05D002170 ORTHO05D007478 1.5e-169 599.7 361 82.8
Cc04_g09360 Coffea canephora HOM05D002170 ORTHO05D007478 7.5e-169 597.4 344 85.5
Lsat_1_v5_gn_0_10461 Lactuca sativa HOM05D002170 ORTHO05D007478 7.5e-169 597.4 341 85.6
CARHR093160 Cardamine hirsuta HOM05D002170 ORTHO05D007478 2.2e-168 595.9 346 83.8
GSVIVG01008478001 Vitis vinifera HOM05D002170 ORTHO05D007478 1.1e-167 593.6 316 92.4
AUR62041617 Chenopodium quinoa HOM05D002170 ORTHO05D007478 1.4e-167 593.2 374 80.7
A05p32010 Brassica napus HOM05D002170 ORTHO05D007478 1.8e-167 592.8 352 82.1
SEGI_10571 Sequoiadendron giganteum HOM05D002170 ORTHO05D007478 4.1e-167 591.7 333 86.8
C05p48530 Brassica napus HOM05D002170 ORTHO05D007478 1.6e-166 589.7 381 76.9
AL3G30970 Arabidopsis lyrata HOM05D002170 ORTHO05D007478 2.0e-166 589.3 380 77.6
AT3G17810 Arabidopsis thaliana HOM05D002170 ORTHO05D007478 2.7e-166 589.0 380 77.9
Thhalv10020777m.g Eutrema salsugineum HOM05D002170 ORTHO05D007478 3.5e-166 588.6 381 76.9
CiPaw.15G147300 Carya illinoinensis HOM05D002170 ORTHO05D007478 5.9e-166 587.8 316 90.5
Sp3g15930 Schrenkiella parvula HOM05D002170 ORTHO05D007478 7.7e-166 587.4 380 77.4
HPP92_007961 Vanilla planifolia HOM05D002170 ORTHO05D007478 1.0e-165 587.0 345 83.2
BolC5t33589H Brassica oleracea HOM05D002170 ORTHO05D007478 1.7e-165 586.3 381 76.6
BraA05t22032Z Brassica rapa HOM05D002170 ORTHO05D007478 1.7e-165 586.3 393 75.6
BcaB04g18965 Brassica carinata HOM05D002170 ORTHO05D007478 3.8e-165 585.1 377 77.7
Peaxi162Scf00171g01030 Petunia axillaris HOM05D002170 ORTHO05D007478 6.5e-165 584.3 378 78.3
Os02g0736400 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D007478 1.5e-164 583.2 345 83.5
BcaB04g20814 Brassica carinata HOM05D002170 ORTHO05D007478 4.2e-164 581.6 380 76.3
BcaNung05883 Brassica carinata HOM05D002170 ORTHO05D007478 2.7e-163 578.9 382 76.2
A01p36570 Brassica napus HOM05D002170 ORTHO05D007478 1.0e-162 577.0 380 76.6
BcaC09g48741 Brassica carinata HOM05D002170 ORTHO05D007478 5.2e-162 574.7 380 76.3
Zm00001eb253890 Zea mays HOM05D002170 ORTHO05D007478 5.2e-162 574.7 337 83.4
C01p46400 Brassica napus HOM05D002170 ORTHO05D007478 2.6e-161 572.4 380 76.1
BraA01t03721Z Brassica rapa HOM05D002170 ORTHO05D007478 1.7e-160 569.7 388 75.0
Nitab4.5_0000430g0180 Nicotiana tabacum HOM05D002170 ORTHO05D007478 2.2e-160 569.3 324 86.1
BolC1t04600H Brassica oleracea HOM05D002170 ORTHO05D007478 4.9e-160 568.2 380 75.8
ATR0118G019 Amborella trichopoda HOM05D002170 ORTHO05D007478 2.4e-159 565.8 344 80.8
Nitab4.5_0006581g0020 Nicotiana tabacum HOM05D002170 ORTHO05D007478 3.1e-159 565.5 324 85.2
Aa31LG8G4690 Aethionema arabicum HOM05D002170 ORTHO05D007478 4.1e-159 565.1 444 66.7
SHI19063 Sapria himalayana HOM05D002170 ORTHO05D007478 2.7e-158 562.4 336 80.7
AUR62036004 Chenopodium quinoa HOM05D002170 ORTHO05D007478 8.6e-157 557.4 316 87.0
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 2.5e-156 555.8 309 87.7
Pp3c20_21870 Physcomitrium patens HOM05D002170 ORTHO05D007478 2.8e-155 552.4 327 80.7
AagrBONN_evm.TU.Sc2ySwM_362.1270 Anthoceros agrestis HOM05D002170 ORTHO05D007478 2.3e-154 549.3 348 75.0
Pp3c23_13670 Physcomitrium patens HOM05D002170 ORTHO05D007478 1.5e-153 546.6 327 80.7
Mapoly0033s0018 Marchantia polymorpha HOM05D002170 ORTHO05D007478 2.2e-152 542.7 332 79.5
SMO356G0689 Selaginella moellendorffii HOM05D002170 ORTHO05D007478 8.6e-149 530.8 345 75.1
CDE04G1365 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 2.8e-147 525.8 374 71.9
CBR_g39071 Chara braunii HOM05D002170 ORTHO05D007478 2.3e-138 496.1 340 69.4
MCO10G163 Micromonas commoda HOM05D002170 ORTHO05D007478 1.4e-135 486.9 355 67.6
PRCOL_00005290 Prasinoderma coloniale HOM05D002170 ORTHO05D007478 1.9e-132 476.5 317 72.2
BcaC01g03730 Brassica carinata HOM05D002170 ORTHO05D007478 2.5e-132 476.1 341 71.6
Cre13.g578750 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D007478 3.6e-131 472.2 364 64.0
unitig_27.g25082 Utricularia gibba HOM05D002170 ORTHO05D007478 1.5e-113 413.7 236 85.6
Oeu016182.1 Olea europaea HOM05D002170 ORTHO05D007478 4.9e-104 382.1 280 71.8
C03p49210 Brassica napus HOM05D002170 ORTHO05D007478 7.9e-102 374.8 388 54.6
BolC3t17203H Brassica oleracea HOM05D002170 ORTHO05D007478 6.2e-99 365.2 248 74.2
Potri.012G043300 Populus trichocarpa HOM05D002170 ORTHO05D007478 2.1e-86 323.6 215 77.7
Haze_26546 Corylus avellana HOM05D002170 ORTHO05D007478 9.4e-71 271.6 329 43.5
Haze_27328 Corylus avellana HOM05D002170 ORTHO05D007478 7.9e-70 268.5 329 43.5
SGA_v2.0_scaffold40G15643 Striga asiatica HOM05D002170 ORTHO05D007478 9.7e-68 261.5 183 73.8
SGA_v2.0_scaffold1356G53925 Striga asiatica HOM05D002170 ORTHO05D007478 6.3e-51 205.7 118 85.6
Solyc02g044040.3 Solanum lycopersicum HOM05D002170 ORTHO05D390875 5.5e-47 192.6 113 78.8
Psat3g071120 Pisum sativum HOM05D002170 ORTHO05D327785 6.4e-35 152.5 125 69.6
Ca_22557_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148971 2.3e-24 117.5 57 93.0
unitig_27.g25081 Utricularia gibba HOM05D002170 ORTHO05D007478 1.9e-23 114.4 66 81.8
MD05G1052900 Malus domestica HOM05D002170 ORTHO05D000222 5.1e-16 89.7 51 86.3
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 4.3e-15 86.7 195 31.8
Ca_03420_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148646 4.1e-10 70.1 40 77.5
MSTRG.4628 Avicennia marina HOM05D002170 ORTHO05D023792 6.0e-09 66.2 41 75.6
BolC3t17202H Brassica oleracea HOM05D000003 ORTHO05D001498 3.0e-08 63.9 72 51.4
Phvul.008G096200 Phaseolus vulgaris HOM05D002170 ORTHO05D023792 8.6e-08 62.4 32 87.5
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 3.6e-06 57.0 156 28.2
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 4.7e-06 56.6 156 27.6


User provided reference genes

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