Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2277g0040 Pisum sativum HOM05D000929 ORTHO05D004137 6.6e-58 227.6 161 100.0
Psat5g219760 Pisum sativum HOM05D000929 ORTHO05D004137 9.9e-46 187.2 185 59.5
Psat3g146040 Pisum sativum HOM05D000221 ORTHO05D004137 3.8e-29 132.1 160 51.2
Psat0s3732g0120 Pisum sativum HOM05D000929 ORTHO05D004137 5.1e-26 121.7 184 44.6
Duzib168G0512 Durio zibethinus HOM05D000929 ORTHO05D004137 6.9e-23 111.3 105 59.0
Duzib150G0964 Durio zibethinus HOM05D000929 ORTHO05D004137 2.0e-22 109.8 105 58.1
Nitab4.5_0004926g0020 Nicotiana tabacum HOM05D000929 ORTHO05D004137 2.0e-22 109.8 126 50.0
BcaC09g49654 Brassica carinata HOM05D000929 ORTHO05D004137 5.0e-21 105.1 143 45.5
Atru.chr3.3402 Acer truncatum HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
arahy.Tifrunner.gnm1.ann1.F9AZ7P Arachis hypogaea HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
arahy.Tifrunner.gnm1.ann1.MS8XLG Arachis hypogaea HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Cfa010100 Carpinus fangiana HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
CiPaw.14G104400 Carya illinoinensis HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Ca_01687_v3 Cicer arietinum L. HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Ciclev10027737m.g Citrus clementina HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
COL.COLO4_19274 Corchorus olitorius HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Duzib170G1132 Durio zibethinus HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Glyma.12G180600 Glycine max HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Glyma.13G320200 Glycine max HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Gohir.A09G092000 Gossypium hirsutum HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Gohir.D09G091900 Gossypium hirsutum HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Gorai.006G108500 Gossypium raimondii HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Lj3g0021930 Lotus japonicus HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Lalb_Chr22g0350571 Lupinus albus HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
MD03G1132700 Malus domestica HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
MD11G1155000 Malus domestica HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Medtr2g084610 Medicago truncatula HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Phvul.005G128200 Phaseolus vulgaris HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Psat5g254120 Pisum sativum HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Prupe.6G117500 Prunus persica HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
PGR119G0792 Punica granatum HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
QL01p014018 Quercus lobata HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
Sed0008575 Sechium edule HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
TPR.G32382 Trifolium pratense HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
TWI79G0614 Tripterygium wilfordii HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
VMungo1080G1504 Vigna mungo HOM05D000929 ORTHO05D004137 3.2e-20 102.4 147 46.3
CANSAT64G1824 Cannabis sativa HOM05D000929 ORTHO05D004137 4.2e-20 102.1 146 46.6
MELO3C021463.2 Cucumis melo HOM05D000929 ORTHO05D004137 4.2e-20 102.1 147 45.6
CsaV3_6G014610 Cucumis sativus L. HOM05D000929 ORTHO05D004137 4.2e-20 102.1 147 45.6
FvH4_3g30090 Fragaria vesca HOM05D000929 ORTHO05D004137 4.2e-20 102.1 147 45.6
FAN11G0593 Fragaria x ananassa HOM05D000929 ORTHO05D004137 4.2e-20 102.1 147 45.6
FAN16G3173 Fragaria x ananassa HOM05D000929 ORTHO05D004137 4.2e-20 102.1 147 45.6
RcHm_v2.0_Chr5g0055751 Rosa chinensis HOM05D000929 ORTHO05D004137 4.2e-20 102.1 147 45.6
Thecc.09G293300 Theobroma cacao HOM05D000929 ORTHO05D004137 7.2e-20 101.3 147 45.6
vmacro03226 Vaccinium macrocarpon HOM05D000929 ORTHO05D004137 7.2e-20 101.3 147 45.6
vmacro23023 Vaccinium macrocarpon HOM05D000929 ORTHO05D004137 7.2e-20 101.3 147 45.6
GSVIVG01031413001 Vitis vinifera HOM05D000929 ORTHO05D004137 7.2e-20 101.3 147 45.6
Gohir.A08G003300 Gossypium hirsutum HOM05D000929 ORTHO05D004137 9.4e-20 100.9 147 45.6
Lalb_Chr24g0395091 Lupinus albus HOM05D000929 ORTHO05D004137 9.4e-20 100.9 147 45.6
Sed0000238 Sechium edule HOM05D000929 ORTHO05D004137 9.4e-20 100.9 147 45.6
TWI31G0368 Tripterygium wilfordii HOM05D000929 ORTHO05D004137 9.4e-20 100.9 147 45.6
Actinidia07205 Actinidia chinensis HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
Actinidia24174 Actinidia chinensis HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
Cc01_g09940 Coffea canephora HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
Dinv29411 Davidia involucrata HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
ECA233G5521 Erigeron canadensis HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
Rhsim13G0104500 Rhododendron simsii HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
SalBow6G6633 Salvia bowleyana HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
SGA_v2.0_scaffold27G11598 Striga asiatica HOM05D000929 ORTHO05D004137 1.6e-19 100.1 147 44.9
CSS0004620 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D004137 2.1e-19 99.8 147 44.9
Gohir.D08G013700 Gossypium hirsutum HOM05D000929 ORTHO05D004137 2.1e-19 99.8 147 44.9
Gorai.004G008000 Gossypium raimondii HOM05D000929 ORTHO05D004137 2.1e-19 99.8 147 44.9
HanXRQChr14g0451931 Helianthus annuus HOM05D000929 ORTHO05D004137 2.1e-19 99.8 147 44.2
Hma1.2p1_0051F.1_g029810 Hydrangea macrophylla HOM05D000929 ORTHO05D004137 2.1e-19 99.8 147 44.9
Potri.004G189700 Populus trichocarpa HOM05D000929 ORTHO05D004137 2.1e-19 99.8 146 45.2
Rhsim01G0209300 Rhododendron simsii HOM05D000929 ORTHO05D004137 2.1e-19 99.8 147 44.2
Sabra04G0128300 Salix brachista HOM05D000929 ORTHO05D004137 2.1e-19 99.8 146 45.2
CiPaw.13G142000 Carya illinoinensis HOM05D000929 ORTHO05D004137 2.7e-19 99.4 147 44.9
DCAR_015485 Daucus carota HOM05D000929 ORTHO05D004137 2.7e-19 99.4 147 44.2
Manes.04G010400 Manihot esculenta HOM05D000929 ORTHO05D004137 2.7e-19 99.4 146 44.5
Potri.009G150300 Populus trichocarpa HOM05D000929 ORTHO05D004137 2.7e-19 99.4 145 45.5
Sc21g0004640 Simmondsia chinensis HOM05D000929 ORTHO05D004137 2.7e-19 99.4 147 43.5
arahy.Tifrunner.gnm1.ann1.JFAW9R Arachis hypogaea HOM05D000929 ORTHO05D004137 3.6e-19 99.0 147 45.6
arahy.Tifrunner.gnm1.ann1.SC897I Arachis hypogaea HOM05D000929 ORTHO05D004137 3.6e-19 99.0 147 45.6
Eucgr.J00415 Eucalyptus grandis HOM05D000929 ORTHO05D004137 3.6e-19 99.0 147 44.9
Nitab4.5_0000442g0230 Nicotiana tabacum HOM05D000929 ORTHO05D004137 3.6e-19 99.0 147 44.2
Nitab4.5_0002571g0040 Nicotiana tabacum HOM05D000929 ORTHO05D004137 3.6e-19 99.0 147 44.2
Psat0s3732g0240 Pisum sativum HOM05D001073 ORTHO05D002392 3.6e-19 99.0 106 53.8
EL10Ac9g21056 Beta vulgaris HOM05D000929 ORTHO05D004137 4.7e-19 98.6 146 44.5
CAN.G919.3 Capsicum annuum HOM05D000929 ORTHO05D004137 4.7e-19 98.6 147 44.2
Dinv12535 Davidia involucrata HOM05D000929 ORTHO05D004137 4.7e-19 98.6 147 44.2
Zm00001eb000860 Zea mays HOM05D000929 ORTHO05D004137 4.7e-19 98.6 145 44.8
Aqoxy2G01493 Aquilegia oxysepala HOM05D000929 ORTHO05D004137 6.1e-19 98.2 145 44.8
ClCG02G021820 Citrullus lanatus HOM05D000929 ORTHO05D004137 6.1e-19 98.2 157 42.7
Manes.11G155700 Manihot esculenta HOM05D000929 ORTHO05D004137 6.1e-19 98.2 147 42.9
Nitab4.5_0003470g0070 Nicotiana tabacum HOM05D000929 ORTHO05D004137 6.1e-19 98.2 146 44.5
HPP92_028038 Vanilla planifolia HOM05D000929 ORTHO05D004137 6.1e-19 98.2 147 43.5
A01p26810 Brassica napus HOM05D000929 ORTHO05D004137 7.9e-19 97.8 147 44.2
BolC1t03387H Brassica oleracea HOM05D000929 ORTHO05D004137 7.9e-19 97.8 147 44.2
BraA01t02610Z Brassica rapa HOM05D000929 ORTHO05D004137 7.9e-19 97.8 147 44.2
Lj1A219G36 Lonicera japonica HOM05D000929 ORTHO05D004137 7.9e-19 97.8 147 43.5
THA.LOC104810893 Tarenaya hassleriana HOM05D000929 ORTHO05D004137 7.9e-19 97.8 146 44.5
TAR633G0080 Trochodendron aralioides HOM05D000929 ORTHO05D004137 7.9e-19 97.8 145 44.8
unitig_27.g25115 Utricularia gibba HOM05D000929 ORTHO05D004137 7.9e-19 97.8 147 43.5
AL6G33770 Arabidopsis lyrata HOM05D000929 ORTHO05D004137 1.0e-18 97.4 146 44.5
AL6G33800 Arabidopsis lyrata HOM05D000929 ORTHO05D004137 1.0e-18 97.4 146 44.5
AT5G22770 Arabidopsis thaliana HOM05D000929 ORTHO05D004137 1.0e-18 97.4 146 44.5
AT5G22780 Arabidopsis thaliana HOM05D000929 ORTHO05D004137 1.0e-18 97.4 146 44.5
Carub.0006s2048 Capsella rubella HOM05D000929 ORTHO05D004137 1.0e-18 97.4 146 44.5
Carub.0006s2049 Capsella rubella HOM05D000929 ORTHO05D004137 1.0e-18 97.4 146 44.5
ECA238G1224 Erigeron canadensis HOM05D000929 ORTHO05D004137 1.0e-18 97.4 147 43.5
Migut.D02325 Erythranthe guttata HOM05D000929 ORTHO05D004137 1.0e-18 97.4 145 44.1
Thhalv10012556m.g Eutrema salsugineum HOM05D000929 ORTHO05D004137 1.0e-18 97.4 146 44.5
HanXRQChr13g0396891 Helianthus annuus HOM05D000929 ORTHO05D004137 1.0e-18 97.4 147 42.9
Lsat_1_v5_gn_2_96621 Lactuca sativa HOM05D000929 ORTHO05D004137 1.0e-18 97.4 147 43.5
Os03g0112101 Oryza sativa ssp. japonica HOM05D000929 ORTHO05D004137 1.0e-18 97.4 145 44.1
Peaxi162Scf00157g00039 Petunia axillaris HOM05D000929 ORTHO05D004137 1.0e-18 97.4 147 43.5
Peaxi162Scf00789g00218 Petunia axillaris HOM05D000929 ORTHO05D004137 1.0e-18 97.4 147 43.5
Hund00800 Selenicereus undatus HOM05D000929 ORTHO05D004137 1.0e-18 97.4 147 42.9
Aa31LG1G12920 Aethionema arabicum HOM05D000929 ORTHO05D004137 1.4e-18 97.1 147 43.5
AUR62023959 Chenopodium quinoa HOM05D000929 ORTHO05D004137 1.4e-18 97.1 145 44.1
AUR62031755 Chenopodium quinoa HOM05D000929 ORTHO05D004137 1.4e-18 97.1 145 44.1
Sabra09G0119000 Salix brachista HOM05D000929 ORTHO05D004137 1.4e-18 97.1 158 42.4
Actinidia03683 Actinidia chinensis HOM05D000929 ORTHO05D004137 1.8e-18 96.7 147 44.2
Solyc06g074650.3 Solanum lycopersicum HOM05D000929 ORTHO05D004137 1.8e-18 96.7 145 44.1
Sopen06g031070 Solanum pennellii HOM05D000929 ORTHO05D004137 1.8e-18 96.7 145 44.1
Oeu010644.1 Olea europaea HOM05D000929 ORTHO05D004137 3.0e-18 95.9 147 42.2
PSO339G3653 Papaver somniferum HOM05D000929 ORTHO05D004137 3.0e-18 95.9 145 43.4
PSO384G2211 Papaver somniferum HOM05D000929 ORTHO05D004137 3.0e-18 95.9 145 43.4
ATR0820G043 Amborella trichopoda HOM05D000929 ORTHO05D004137 3.9e-18 95.5 145 44.1
A10p18250 Brassica napus HOM05D000929 ORTHO05D004137 3.9e-18 95.5 146 43.2
C09p53880 Brassica napus HOM05D000929 ORTHO05D004137 3.9e-18 95.5 146 43.2
BolC9t58261H Brassica oleracea HOM05D000929 ORTHO05D004137 3.9e-18 95.5 146 43.2
BraA10t43900Z Brassica rapa HOM05D000929 ORTHO05D004137 3.9e-18 95.5 146 43.2
CARHR190820 Cardamine hirsuta HOM05D000929 ORTHO05D004137 3.9e-18 95.5 146 43.2
Lj2C996G14 Lonicera japonica HOM05D000929 ORTHO05D004137 3.9e-18 95.5 145 45.5
CSS0041991 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D004137 8.8e-18 94.4 147 42.9
CDE02G4539 Ceratophyllum demersum HOM05D000929 ORTHO05D004137 1.1e-17 94.0 147 42.2
CDE04G0670 Ceratophyllum demersum HOM05D000929 ORTHO05D004137 1.1e-17 94.0 147 42.2
Solyc11g066770.3 Solanum lycopersicum HOM05D000929 ORTHO05D004137 1.1e-17 94.0 147 42.2
Sopen11g026490 Solanum pennellii HOM05D000929 ORTHO05D004137 1.1e-17 94.0 147 42.2
CAN.G644.41 Capsicum annuum HOM05D000929 ORTHO05D004137 1.5e-17 93.6 147 42.2
THA.LOC104814807 Tarenaya hassleriana HOM05D000929 ORTHO05D004137 2.0e-17 93.2 147 42.9
COL.COLO4_18716 Corchorus olitorius HOM05D000929 ORTHO05D004137 2.6e-17 92.8 146 42.5
Nn2g13966 Nelumbo nucifera HOM05D000929 ORTHO05D004137 4.4e-17 92.0 145 42.8
THA.LOC104799529 Tarenaya hassleriana HOM05D000929 ORTHO05D004137 4.4e-17 92.0 147 40.8
Aa31LG4G14280 Aethionema arabicum HOM05D000929 ORTHO05D004137 9.7e-17 90.9 153 42.5
CARHR151250 Cardamine hirsuta HOM05D000929 ORTHO05D004137 9.7e-17 90.9 147 41.5
AagrBONN_evm.TU.Sc2ySwM_344.3846 Anthoceros agrestis HOM05D000929 ORTHO05D004137 1.3e-16 90.5 145 42.1
SMO353G0315 Selaginella moellendorffii HOM05D000929 ORTHO05D004137 1.3e-16 90.5 145 42.1
Pp3c17_6470 Physcomitrium patens HOM05D000929 ORTHO05D004137 3.7e-16 89.0 145 41.4
Pp3c17_2250 Physcomitrium patens HOM05D000929 ORTHO05D004137 8.2e-16 87.8 145 40.0
Mapoly0072s0011 Marchantia polymorpha HOM05D000929 ORTHO05D004137 1.1e-15 87.4 145 40.0
CBR_g29503 Chara braunii HOM05D000929 ORTHO05D004137 6.9e-15 84.7 145 37.9
C01p34170 Brassica napus HOM05D000929 ORTHO05D004137 9.1e-15 84.3 171 38.0
Haze_23466 Corylus avellana HOM05D000929 ORTHO05D004137 9.1e-15 84.3 134 44.0
Lsat_1_v5_gn_6_42741 Lactuca sativa HOM05D000929 ORTHO05D004137 2.6e-14 82.8 147 42.2
SGA_v2.0_scaffold193G40716 Striga asiatica HOM05D000929 ORTHO05D004137 6.5e-13 78.2 170 35.9
Pp3c1_29560 Physcomitrium patens HOM05D000929 ORTHO05D004137 2.5e-12 76.3 143 37.8
TAR636G3579 Trochodendron aralioides HOM05D000929 ORTHO05D004137 4.2e-12 75.5 131 39.7
Cpa.g.sc47.59 Carica papaya HOM05D000929 ORTHO05D004137 5.5e-12 75.1 132 41.7
FAN21G3154 Fragaria x ananassa HOM05D000929 ORTHO05D004137 2.1e-11 73.2 225 28.9
vmacro14382 Vaccinium macrocarpon HOM05D000929 ORTHO05D004137 3.0e-10 69.3 151 36.4
DCAR_018747 Daucus carota HOM05D000929 ORTHO05D004137 2.0e-09 66.6 60 58.3
FAN25G1715 Fragaria x ananassa HOM05D000929 ORTHO05D004137 2.6e-09 66.2 237 27.8
Oeu008377.1 Olea europaea HOM05D000929 ORTHO05D004137 2.6e-09 66.2 60 56.7
Lalb_Chr14g0374281 Lupinus albus HOM05D000929 ORTHO05D004137 9.7e-09 64.3 43 69.8
PRCOL_00005986 Prasinoderma coloniale HOM05D000929 ORTHO05D004137 1.3e-08 63.9 145 31.7
Ah.01g016700 Amaranthus hybridus HOM05D000929 ORTHO05D004137 2.2e-08 63.2 60 53.3
MBI17_g45825_MAGBIO Magnolia biondii HOM05D000929 ORTHO05D004137 2.2e-08 63.2 31 93.5
Sp6g22650 Schrenkiella parvula HOM05D000929 ORTHO05D004137 2.2e-08 63.2 59 55.9
Dinv09632 Davidia involucrata HOM05D000929 ORTHO05D004137 6.3e-08 61.6 31 90.3
Lalb_Chr14g0374291 Lupinus albus HOM05D000929 ORTHO05D004137 6.3e-08 61.6 31 90.3
SHI06142 Sapria himalayana HOM05D000929 ORTHO05D004137 6.3e-08 61.6 31 90.3
Sp5g15820 Schrenkiella parvula HOM05D000929 ORTHO05D004137 1.4e-07 60.5 59 54.2
SEGI_17793 Sequoiadendron giganteum HOM05D000929 ORTHO05D004137 1.4e-07 60.5 31 87.1
Dinv07357 Davidia involucrata HOM05D000929 ORTHO05D004137 1.8e-07 60.1 31 90.3
Hma1.2p1_0140F.1_g063590 Hydrangea macrophylla HOM05D000929 ORTHO05D004137 2.4e-07 59.7 31 87.1
SEGI_29219 Sequoiadendron giganteum HOM05D000929 ORTHO05D004137 5.3e-07 58.5 56 53.6
Hma1.2p1_1655F.1_g295990 Hydrangea macrophylla HOM05D000929 ORTHO05D004137 1.2e-06 57.4 31 83.9
MBI07_g37209_MAGBIO Magnolia biondii HOM05D000929 ORTHO05D004137 2.0e-06 56.6 40 62.5


User provided reference genes

Program Settings