Gene: Pp3c1_29560

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_29560
  • Transcript Identifier Pp3c1_29560V3.2
  • Gene Type Coding gene
  • Location Chr01 : 21154665-21165641 : positive

Gene Family Information

  • ID HOM05D000929
  • #Genes/#Species 648/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_29560V3.2
  • pacid 32969526
  • alias Pp1s171_160V6
  • alias Phpat.001G118200
  • alias Phypa_140846
  • uniprot A0A2K1LA78

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0072583
IBA
IEA
GOA Databaseclathrin-dependent endocytosis
GO:0072583
IEA
InterProclathrin-dependent endocytosis
GO:0006898
IBA
GOA Databasereceptor-mediated endocytosis
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0006897
IEA
GOA Databaseendocytosis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22780
GO:0140312
IBA
GOA Databasecargo adaptor activity
GO:0035615
IBA
IEA
GOA Databaseclathrin adaptor activity
GO:0035615
IEA
InterProclathrin adaptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G22780
GO:0030122
IBA
IEA
GOA DatabaseAP-2 adaptor complex
GO:0030122
IEA
InterProAP-2 adaptor complex
GO:0030117
IEA
GOA Databasemembrane coat
GO:0030117
IEA
InterPromembrane coat
GO:0030131
IEA
GOA Databaseclathrin adaptor complex
GO:0030131
IEA
InterProclathrin adaptor complex
GO:0005905
IEA
GOA Databaseclathrin-coated pit
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR012295 TBP domain superfamily
IPR003164 Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain
IPR017104 Adaptor protein complex AP-2, alpha subunit
IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR016024 Armadillo-type fold
IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
IPR013041 Clathrin adaptor, appendage, Ig-like subdomain superfamily
Mapman id Description
22.3.1.3.1 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.large subunit alpha (AP2A)