Gene: Sopen11g026490
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g026490
- Transcript Identifier Sopen11g026490.2
- Gene Type Coding gene
- Location Spenn-ch11 : 62256599-62274006 : positive
Gene Family Information
- ID HOM05D000929
- #Genes/#Species 648/100
- Phylogenetic origin
- ID ORTHO05D004137
- #Genes/#Species 190/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g026490.2
Descriptions
- Description alpha-adaptin (alpha-ADR) | FUNCTIONS IN: protein transporter activity, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: male gametophyte, pollen tube, leaf | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain , Adaptor protein complex AP-2, alpha subunit , Armadillo-like helical , Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain , Clathrin/coatomer adaptor, adaptin-like, N-terminal , Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain , Armadillo-type fold , Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain , Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain , Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain | BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0015031 | IEA | InterPro | protein transport | |
| GO:0072583 | IEA | InterPro | clathrin-dependent endocytosis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035615 | IEA | InterPro | clathrin adaptor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G22780 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0030131 | IEA | InterPro | clathrin adaptor complex | |
| GO:0030122 | IEA | InterPro | AP-2 adaptor complex | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G22780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002553 | Clathrin/coatomer adaptor, adaptin-like, N-terminal |
| IPR003164 | Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain |
| IPR011989 | Armadillo-like helical |
| IPR009028 | Coatomer/calthrin adaptor appendage, C-terminal subdomain |
| IPR016024 | Armadillo-type fold |
| IPR017104 | Adaptor protein complex AP-2, alpha subunit |
| IPR008152 | Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain |
| IPR013041 | Clathrin adaptor, appendage, Ig-like subdomain superfamily |
| IPR012295 | TBP domain superfamily |
| Mapman id | Description |
|---|---|
| 22.3.1.3.1 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.large subunit alpha (AP2A) |