Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G084000 Prunus persica HOM05D004477 ORTHO05D005615 3.2e-101 371.7 183 100.0
Prupe.I005600 Prunus persica HOM05D004477 ORTHO05D005615 5.2e-67 258.1 168 82.7
THA.LOC104800270 Tarenaya hassleriana HOM05D004477 ORTHO05D005615 2.7e-39 166.0 143 65.7
Cfa019574 Carpinus fangiana HOM05D004477 ORTHO05D005615 1.3e-38 163.7 143 65.0
Haze_09336 Corylus avellana HOM05D004477 ORTHO05D005615 1.3e-38 163.7 143 65.0
Lj3g0011019 Lotus japonicus HOM05D004477 ORTHO05D005615 1.3e-38 163.7 143 65.7
Atru.chr3.2871 Acer truncatum HOM05D004477 ORTHO05D005615 1.7e-38 163.3 143 65.0
Ca_14282_v3 Cicer arietinum L. HOM05D004477 ORTHO05D005615 2.3e-38 162.9 143 65.7
Phvul.005G031000 Phaseolus vulgaris HOM05D004477 ORTHO05D005615 2.3e-38 162.9 143 65.0
Cfa019303 Carpinus fangiana HOM05D004477 ORTHO05D005615 3.0e-38 162.5 143 64.3
CiPaw.11G047300 Carya illinoinensis HOM05D004477 ORTHO05D005615 3.0e-38 162.5 143 65.0
Glyma.11G152600 Glycine max HOM05D004477 ORTHO05D005615 3.0e-38 162.5 143 65.7
QL04p014055 Quercus lobata HOM05D004477 ORTHO05D005615 3.9e-38 162.2 143 64.3
THA.LOC104824184 Tarenaya hassleriana HOM05D004477 ORTHO05D005615 3.9e-38 162.2 143 65.0
arahy.Tifrunner.gnm1.ann1.95EFUZ Arachis hypogaea HOM05D004477 ORTHO05D005615 5.1e-38 161.8 143 65.0
arahy.Tifrunner.gnm1.ann1.T70L3V Arachis hypogaea HOM05D004477 ORTHO05D005615 5.1e-38 161.8 143 65.0
Actinidia06268 Actinidia chinensis HOM05D004477 ORTHO05D005615 6.6e-38 161.4 143 63.6
CSS0003663 Camellia sinensis var. sinensis HOM05D004477 ORTHO05D005615 6.6e-38 161.4 143 63.6
CSS0028927 Camellia sinensis var. sinensis HOM05D004477 ORTHO05D005615 6.6e-38 161.4 143 63.6
VMungo1080G0371 Vigna mungo HOM05D004477 ORTHO05D005615 6.6e-38 161.4 143 65.0
Haze_07686 Corylus avellana HOM05D004477 ORTHO05D005615 8.7e-38 161.0 143 63.6
Lalb_Chr20g0109051 Lupinus albus HOM05D004477 ORTHO05D005615 8.7e-38 161.0 143 64.3
MD05G1030400 Malus domestica HOM05D004477 ORTHO05D005615 8.7e-38 161.0 143 63.6
Ciclev10032276m.g Citrus clementina HOM05D004477 ORTHO05D005615 1.1e-37 160.6 143 64.3
MD10G1031800 Malus domestica HOM05D004477 ORTHO05D005615 1.1e-37 160.6 143 63.6
arahy.Tifrunner.gnm1.ann1.5IKX6D Arachis hypogaea HOM05D004477 ORTHO05D005615 1.5e-37 160.2 143 64.3
arahy.Tifrunner.gnm1.ann1.8LX4B2 Arachis hypogaea HOM05D004477 ORTHO05D005615 1.5e-37 160.2 143 64.3
Cpa.g.sc51.97 Carica papaya HOM05D004477 ORTHO05D005615 1.5e-37 160.2 143 64.3
Glyma.04G139900 Glycine max HOM05D004477 ORTHO05D005615 1.5e-37 160.2 143 65.0
Prupe.2G030400 Prunus persica HOM05D004477 ORTHO05D005615 1.5e-37 160.2 143 63.6
Oeu049664.1 Olea europaea HOM05D004477 ORTHO05D005615 2.5e-37 159.5 154 63.0
TWI15G0640 Tripterygium wilfordii HOM05D004477 ORTHO05D005615 2.5e-37 159.5 143 63.6
TAR623G1431 Trochodendron aralioides HOM05D004477 ORTHO05D005615 3.3e-37 159.1 143 62.9
Nn7g36505 Nelumbo nucifera HOM05D004477 ORTHO05D005615 4.3e-37 158.7 143 63.6
Nitab4.5_0000624g0090 Nicotiana tabacum HOM05D004477 ORTHO05D005615 9.6e-37 157.5 143 62.2
Potri.001G024500 Populus trichocarpa HOM05D004477 ORTHO05D005615 9.6e-37 157.5 143 62.9
Potri.003G201100 Populus trichocarpa HOM05D004477 ORTHO05D005615 9.6e-37 157.5 143 62.9
Sabra03G0148700 Salix brachista HOM05D004477 ORTHO05D005615 9.6e-37 157.5 143 62.9
GSVIVG01000834001 Vitis vinifera HOM05D004477 ORTHO05D005615 9.6e-37 157.5 143 62.2
Aa31LG2G960 Aethionema arabicum HOM05D004477 ORTHO05D005615 1.3e-36 157.1 143 61.5
Eucgr.G03251 Eucalyptus grandis HOM05D004477 ORTHO05D005615 1.3e-36 157.1 143 62.2
vmacro13733 Vaccinium macrocarpon HOM05D004477 ORTHO05D005615 1.3e-36 157.1 143 62.2
Medtr3g019370 Medicago truncatula HOM05D004477 ORTHO05D005615 1.6e-36 156.8 143 62.2
MSTRG.2896 Avicennia marina HOM05D004477 ORTHO05D005615 2.8e-36 156.0 143 62.9
CDE05G2398 Ceratophyllum demersum HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.9
MELO3C005127.2 Cucumis melo HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.9
CsaV3_5G024730 Cucumis sativus L. HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.9
Sed0015395 Sechium edule HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.2
Solyc01g007250.4 Solanum lycopersicum HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.9
Sopen01g003240 Solanum pennellii HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.9
PGSC0003DMG400000394 Solanum tuberosum HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.9
PGSC0003DMG400016389 Solanum tuberosum HOM05D004477 ORTHO05D005615 3.6e-36 155.6 143 62.9
AL2G11360 Arabidopsis lyrata HOM05D004477 ORTHO05D005615 4.8e-36 155.2 143 60.8
Manes.11G003480 Manihot esculenta HOM05D004477 ORTHO05D005615 4.8e-36 155.2 143 62.2
Sp2g00900 Schrenkiella parvula HOM05D004477 ORTHO05D005615 4.8e-36 155.2 143 61.5
Prupe.8G084800 Prunus persica HOM05D004477 ORTHO05D005615 6.2e-36 154.8 116 75.9
CAN.G574.29 Capsicum annuum HOM05D004477 ORTHO05D005615 8.1e-36 154.5 143 60.8
Psat5g217400 Pisum sativum HOM05D004477 ORTHO05D005615 8.1e-36 154.5 143 61.5
RcHm_v2.0_Chr1g0321121 Rosa chinensis HOM05D004477 ORTHO05D005615 8.1e-36 154.5 143 62.2
ClCG01G007690 Citrullus lanatus HOM05D004477 ORTHO05D005615 1.1e-35 154.1 143 62.2
PSO017G0587 Papaver somniferum HOM05D004477 ORTHO05D005615 1.4e-35 153.7 143 60.8
Mapoly0031s0129 Marchantia polymorpha HOM05D004477 ORTHO05D005615 1.8e-35 153.3 143 61.5
FAN03G1284 Fragaria x ananassa HOM05D004477 ORTHO05D005615 2.4e-35 152.9 143 62.2
FAN10G1920 Fragaria x ananassa HOM05D004477 ORTHO05D005615 2.4e-35 152.9 143 62.2
FvH4_7g02470 Fragaria vesca HOM05D004477 ORTHO05D005615 3.1e-35 152.5 143 62.2
FAN06G1855 Fragaria x ananassa HOM05D004477 ORTHO05D005615 3.1e-35 152.5 143 62.2
Psat4g000640 Pisum sativum HOM05D004477 ORTHO05D005615 3.1e-35 152.5 143 61.5
TAR633G1412 Trochodendron aralioides HOM05D004477 ORTHO05D005615 3.1e-35 152.5 149 60.4
CARHR047410 Cardamine hirsuta HOM05D004477 ORTHO05D005615 4.0e-35 152.1 143 59.4
Thhalv10023618m.g Eutrema salsugineum HOM05D004477 ORTHO05D005615 4.0e-35 152.1 143 59.4
Thecc.10G006900 Theobroma cacao HOM05D004477 ORTHO05D005615 4.0e-35 152.1 143 60.8
Duzib128G1167 Durio zibethinus HOM05D004477 ORTHO05D005615 5.3e-35 151.8 143 60.1
SMO118G0432 Selaginella moellendorffii HOM05D004477 ORTHO05D005615 5.3e-35 151.8 143 59.4
AUR62026831 Chenopodium quinoa HOM05D004477 ORTHO05D005615 6.9e-35 151.4 143 60.8
PSO478G1616 Papaver somniferum HOM05D004477 ORTHO05D005615 6.9e-35 151.4 143 60.1
AUR62037222 Chenopodium quinoa HOM05D004477 ORTHO05D005615 9.0e-35 151.0 143 60.1
EL10Ac2g02848 Beta vulgaris HOM05D004477 ORTHO05D005615 1.2e-34 150.6 143 59.4
Gohir.A06G159200 Gossypium hirsutum HOM05D004477 ORTHO05D005615 1.2e-34 150.6 143 60.1
Gorai.010G192500 Gossypium raimondii HOM05D004477 ORTHO05D005615 1.2e-34 150.6 143 60.1
Psat4g015320 Pisum sativum HOM05D004477 ORTHO05D005615 1.2e-34 150.6 143 60.1
Aqoxy7G00557 Aquilegia oxysepala HOM05D004477 ORTHO05D005615 2.0e-34 149.8 143 60.1
PGR031G2712 Punica granatum HOM05D004477 ORTHO05D005615 2.6e-34 149.4 143 59.4
Hund13333 Selenicereus undatus HOM05D004477 ORTHO05D005615 2.6e-34 149.4 143 60.1
BcaB07g31410 Brassica carinata HOM05D004477 ORTHO05D005615 4.5e-34 148.7 143 58.7
Cc06_g06430 Coffea canephora HOM05D004477 ORTHO05D005615 5.8e-34 148.3 143 59.4
Gohir.D12G108500 Gossypium hirsutum HOM05D004477 ORTHO05D005615 5.8e-34 148.3 143 59.4
HanXRQChr15g0469031 Helianthus annuus HOM05D004477 ORTHO05D005615 5.8e-34 148.3 143 59.4
Carub.0002s0106 Capsella rubella HOM05D004477 ORTHO05D005615 7.6e-34 147.9 143 58.7
HPP92_017907 Vanilla planifolia HOM05D004477 ORTHO05D005615 7.6e-34 147.9 143 60.1
BcaC04g22503 Brassica carinata HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 58.0
A09p15310 Brassica napus HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 58.0
C09p18580 Brassica napus HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 58.0
BolC9t54754H Brassica oleracea HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 58.0
BraA09t37176Z Brassica rapa HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 58.0
COL.COLO4_25826 Corchorus olitorius HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 59.4
Lsat_1_v5_gn_5_69441 Lactuca sativa HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 59.4
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 9.9e-34 147.5 143 59.4
DCAR_030970 Daucus carota HOM05D004477 ORTHO05D005615 2.2e-33 146.4 143 60.1
Sc10g0004300 Simmondsia chinensis HOM05D004477 ORTHO05D005615 3.8e-33 145.6 143 58.7
Sed0014614 Sechium edule HOM05D004477 ORTHO05D005615 4.9e-33 145.2 143 58.0
AT1G63780 Arabidopsis thaliana HOM05D004477 ORTHO05D005615 6.4e-33 144.8 143 58.0
Prupe.2G030500 Prunus persica HOM05D004477 ORTHO05D005615 1.1e-32 144.1 143 59.4
ATR0307G081 Amborella trichopoda HOM05D004477 ORTHO05D005615 2.4e-32 142.9 143 57.3
Migut.H00453 Erythranthe guttata HOM05D004477 ORTHO05D005615 4.2e-32 142.1 143 58.0
Pp3c25_4340 Physcomitrium patens HOM05D004477 ORTHO05D005615 7.1e-32 141.4 143 56.6
Pp3c25_4350 Physcomitrium patens HOM05D004477 ORTHO05D005615 7.1e-32 141.4 143 56.6
Cre10.g454100 Chlamydomonas reinhardtii HOM05D004477 ORTHO05D005615 9.3e-32 141.0 143 54.5
CANSAT80G2023 Cannabis sativa HOM05D004477 ORTHO05D005615 1.2e-31 140.6 143 55.9
BcaB07g31550 Brassica carinata HOM05D004477 ORTHO05D005615 6.0e-31 138.3 143 55.9
Prupe.4G022800 Prunus persica HOM05D004477 ORTHO05D005615 2.3e-30 136.3 143 59.4
CBR_g37218 Chara braunii HOM05D004477 ORTHO05D005615 5.1e-30 135.2 142 54.2
PRCOL_00000378 Prasinoderma coloniale HOM05D004477 ORTHO05D005615 8.7e-30 134.4 143 56.6
Gorai.008G117500 Gossypium raimondii HOM05D004477 ORTHO05D005615 3.3e-29 132.5 129 58.9
Dinv32044 Davidia involucrata HOM05D004477 ORTHO05D005615 9.6e-29 131.0 116 63.8
ECA233G2007 Erigeron canadensis HOM05D004477 ORTHO05D005615 1.6e-28 130.2 143 53.1
FAN10G2896 Fragaria x ananassa HOM05D004477 ORTHO05D005615 1.6e-28 130.2 143 53.1
Nitab4.5_0021326g0010 Nicotiana tabacum HOM05D004477 ORTHO05D005615 1.6e-28 130.2 116 63.8
Rhsim07G0063100 Rhododendron simsii HOM05D004477 ORTHO05D005615 1.6e-28 130.2 143 54.5
Gohir.D06G165100 Gossypium hirsutum HOM05D004477 ORTHO05D005615 2.1e-28 129.8 143 55.9
Sopen11g025700 Solanum pennellii HOM05D004477 ORTHO05D005615 6.2e-28 128.3 143 54.5
Zm00001eb226560 Zea mays HOM05D004477 ORTHO05D005615 3.1e-27 125.9 143 51.0
SalBow7G4685 Salvia bowleyana HOM05D004477 ORTHO05D005615 2.6e-26 122.9 116 62.9
Ah.03g137500 Amaranthus hybridus HOM05D004477 ORTHO05D005615 9.9e-26 120.9 116 62.1
MCO12G196 Micromonas commoda HOM05D004477 ORTHO05D005615 4.2e-24 115.5 154 47.4
Pp3c25_4370 Physcomitrium patens HOM05D004477 ORTHO05D005615 7.1e-24 114.8 116 56.9
FvH4_7g04360 Fragaria vesca HOM05D004477 ORTHO05D005615 5.6e-21 105.1 116 53.4
Peaxi162Scf01810g00112 Petunia axillaris HOM05D004477 ORTHO05D005615 1.3e-20 104.0 143 46.2
SGA_v2.0_scaffold15G07263 Striga asiatica HOM05D004477 ORTHO05D005615 2.1e-20 103.2 143 46.2
FAN03G0199 Fragaria x ananassa HOM05D004477 ORTHO05D005615 6.2e-20 101.7 144 46.5
Solyc11g065960.3 Solanum lycopersicum HOM05D004477 ORTHO05D005615 9.0e-19 97.8 67 80.6
TPR.G3866 Trifolium pratense HOM05D004477 ORTHO05D005615 9.0e-19 97.8 65 83.1
TPR.G771 Trifolium pratense HOM05D004477 ORTHO05D005615 9.0e-19 97.8 65 83.1
SGA_v2.0_scaffold289G47250 Striga asiatica HOM05D004477 ORTHO05D005615 5.8e-18 95.1 122 50.0
Peaxi162Scf00211g01210 Petunia axillaris HOM05D004477 ORTHO05D005615 2.2e-17 93.2 143 41.3
Solyc11g065980.3 Solanum lycopersicum HOM05D004477 ORTHO05D005615 9.7e-13 77.8 54 68.5
Haze_26453 Corylus avellana HOM05D004477 ORTHO05D005615 1.3e-12 77.4 140 35.0
Lj7A582G32 Lonicera japonica HOM05D004477 ORTHO05D005615 2.4e-11 73.2 116 42.2
Os08g0155000 Oryza sativa ssp. japonica HOM05D004477 ORTHO05D005615 2.0e-10 70.1 143 36.4
AagrBONN_evm.TU.Sc2ySwM_228.4108 Anthoceros agrestis HOM05D004477 ORTHO05D005615 1.0e-09 67.8 52 59.6
SalBow5G3206 Salvia bowleyana HOM05D031228 ORTHO05D030301 2.3e-06 56.6 87 48.3
BolC4t24495H Brassica oleracea HOM05D004477 ORTHO05D005615 3.0e-06 56.2 54 50.0


User provided reference genes

Program Settings