Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G016800 Prunus persica HOM05D004774 ORTHO05D005514 7.5e-61 236.9 110 100.0
Prupe.2G103200 Prunus persica HOM05D004774 ORTHO05D005514 2.0e-37 159.1 111 71.2
MD08G1227600 Malus domestica HOM05D004774 ORTHO05D005514 2.6e-29 132.1 105 60.0
FAN26G2874 Fragaria x ananassa HOM05D004774 ORTHO05D005514 1.7e-25 119.4 118 55.1
CiPaw.06G137100 Carya illinoinensis HOM05D004774 ORTHO05D005514 5.1e-25 117.9 105 54.3
Cpa.g.sc52.135 Carica papaya HOM05D004774 ORTHO05D005514 1.1e-24 116.7 105 55.2
QL08p045287 Quercus lobata HOM05D004774 ORTHO05D005514 1.1e-24 116.7 105 52.4
CANSAT35G0005 Cannabis sativa HOM05D004774 ORTHO05D005514 1.6e-23 112.8 111 53.2
Peaxi162Scf00934g00135 Petunia axillaris HOM05D004774 ORTHO05D005514 2.1e-23 112.5 104 51.9
GSVIVG01000730001 Vitis vinifera HOM05D004774 ORTHO05D005514 2.1e-23 112.5 104 50.0
GSVIVG01011075001 Vitis vinifera HOM05D004774 ORTHO05D005514 2.8e-23 112.1 104 49.0
TAR636G0805 Trochodendron aralioides HOM05D004774 ORTHO05D005514 4.7e-23 111.3 105 50.5
Thecc.01G266900 Theobroma cacao HOM05D004774 ORTHO05D005514 8.1e-23 110.5 111 50.5
Dinv22475 Davidia involucrata HOM05D004774 ORTHO05D005514 1.1e-22 110.2 105 50.5
Duzib211G0067 Durio zibethinus HOM05D004774 ORTHO05D005514 1.1e-22 110.2 113 49.6
Duzib211G0109 Durio zibethinus HOM05D004774 ORTHO05D005514 1.8e-22 109.4 110 50.0
Ciclev10023915m.g Citrus clementina HOM05D004774 ORTHO05D005514 3.1e-22 108.6 104 55.8
TWI12G1255 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 5.2e-22 107.8 105 52.4
Dinv40162 Davidia involucrata HOM05D004774 ORTHO05D005514 8.9e-22 107.1 105 48.6
Atru.chr5.1584 Acer truncatum HOM05D004774 ORTHO05D005514 1.2e-21 106.7 105 54.3
Sopen07g002340 Solanum pennellii HOM05D004774 ORTHO05D005514 2.0e-21 105.9 104 50.0
RcHm_v2.0_Chr5g0063451 Rosa chinensis HOM05D004774 ORTHO05D005514 2.6e-21 105.5 111 54.1
Nitab4.5_0001427g0080 Nicotiana tabacum HOM05D004774 ORTHO05D005514 4.4e-21 104.8 104 49.0
Cc01_g18810 Coffea canephora HOM05D004774 ORTHO05D005514 9.9e-21 103.6 105 45.7
Duzib138G0586 Durio zibethinus HOM05D004774 ORTHO05D005514 9.9e-21 103.6 111 48.6
Solyc07g006240.4 Solanum lycopersicum HOM05D004774 ORTHO05D005514 9.9e-21 103.6 110 47.3
TWI18G0081 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 9.9e-21 103.6 105 50.5
Nn4g23666 Nelumbo nucifera HOM05D004774 ORTHO05D005514 1.7e-20 102.8 105 46.7
Nn1g02575 Nelumbo nucifera HOM05D004774 ORTHO05D005514 2.9e-20 102.1 105 44.8
CAN.G1190.29 Capsicum annuum HOM05D004774 ORTHO05D005514 4.9e-20 101.3 104 48.1
PGSC0003DMG400011166 Solanum tuberosum HOM05D004774 ORTHO05D005514 4.9e-20 101.3 104 48.1
Nitab4.5_0003289g0060 Nicotiana tabacum HOM05D004774 ORTHO05D005514 6.4e-20 100.9 104 49.0
Eucgr.B01492 Eucalyptus grandis HOM05D004774 ORTHO05D005514 8.4e-20 100.5 118 44.1
AT1G06790 Arabidopsis thaliana HOM05D004774 ORTHO05D005514 1.1e-19 100.1 108 43.5
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 4.1e-19 98.2 105 44.8
Gohir.A07G209300 Gossypium hirsutum HOM05D004774 ORTHO05D005514 4.1e-19 98.2 111 46.8
Gorai.001G243200 Gossypium raimondii HOM05D004774 ORTHO05D005514 4.1e-19 98.2 111 46.8
Hma1.2p1_1029F.1_g249620 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 4.1e-19 98.2 82 56.1
Hma1.2p1_1029F.1_g249641 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 4.1e-19 98.2 82 56.1
Manes.01G201400 Manihot esculenta HOM05D004774 ORTHO05D005514 4.1e-19 98.2 114 47.4
FvH4_1g22880 Fragaria vesca HOM05D004774 ORTHO05D005514 7.1e-19 97.4 111 51.4
Sp1g05530 Schrenkiella parvula HOM05D004774 ORTHO05D005514 7.1e-19 97.4 104 44.2
A08p35880 Brassica napus HOM05D004774 ORTHO05D005514 1.2e-18 96.7 105 43.8
C08p02690 Brassica napus HOM05D004774 ORTHO05D005514 1.2e-18 96.7 105 43.8
BolC8t47065H Brassica oleracea HOM05D004774 ORTHO05D005514 1.2e-18 96.7 105 43.8
BraA08t35495Z Brassica rapa HOM05D004774 ORTHO05D005514 1.2e-18 96.7 105 43.8
AUR62002186 Chenopodium quinoa HOM05D004774 ORTHO05D005514 1.2e-18 96.7 105 50.5
Gohir.D07G215400 Gossypium hirsutum HOM05D004774 ORTHO05D005514 1.2e-18 96.7 111 46.8
AUR62015525 Chenopodium quinoa HOM05D004774 ORTHO05D005514 1.6e-18 96.3 106 50.0
AL1G16800 Arabidopsis lyrata HOM05D004774 ORTHO05D005514 2.1e-18 95.9 105 43.8
Cfa005024 Carpinus fangiana HOM05D004774 ORTHO05D005514 2.7e-18 95.5 105 45.7
MSTRG.18290 Avicennia marina HOM05D004774 ORTHO05D005514 4.6e-18 94.7 114 43.9
EL10Ac3g05825 Beta vulgaris HOM05D004774 ORTHO05D005514 4.6e-18 94.7 105 47.6
COL.COLO4_05101 Corchorus olitorius HOM05D004774 ORTHO05D005514 6.0e-18 94.4 113 46.0
Lsat_1_v5_gn_5_176641 Lactuca sativa HOM05D004774 ORTHO05D005514 6.0e-18 94.4 104 47.1
CSS0049587 Camellia sinensis var. sinensis HOM05D004774 ORTHO05D005514 1.0e-17 93.6 92 46.7
Migut.D00377 Erythranthe guttata HOM05D004774 ORTHO05D005514 1.0e-17 93.6 111 47.7
FAN19G2773 Fragaria x ananassa HOM05D004774 ORTHO05D005514 1.0e-17 93.6 111 50.5
Ca_26554_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 1.3e-17 93.2 106 46.2
Lalb_Chr17g0348441 Lupinus albus HOM05D004774 ORTHO05D005514 1.3e-17 93.2 111 44.1
Thhalv10028967m.g Eutrema salsugineum HOM05D004774 ORTHO05D005514 2.3e-17 92.4 105 41.9
Carub.0001s0611 Capsella rubella HOM05D004774 ORTHO05D005514 3.0e-17 92.0 105 42.9
FvH4_3g35340 Fragaria vesca HOM05D004774 ORTHO05D005514 3.0e-17 92.0 109 51.4
DCAR_002682 Daucus carota HOM05D004774 ORTHO05D005514 5.1e-17 91.3 105 41.0
Lj4g0014477 Lotus japonicus HOM05D004774 ORTHO05D005514 5.1e-17 91.3 111 44.1
FAN11G3419 Fragaria x ananassa HOM05D004774 ORTHO05D005514 6.6e-17 90.9 104 51.0
A09p66780 Brassica napus HOM05D004774 ORTHO05D005514 1.9e-16 89.4 106 42.5
BraA09t42016Z Brassica rapa HOM05D004774 ORTHO05D005514 1.9e-16 89.4 106 42.5
THA.LOC104815831 Tarenaya hassleriana HOM05D004774 ORTHO05D005514 3.3e-16 88.6 105 44.8
PSO170G5180 Papaver somniferum HOM05D004774 ORTHO05D005514 4.3e-16 88.2 111 44.1
Psat3g097920 Pisum sativum HOM05D004774 ORTHO05D005514 5.6e-16 87.8 105 41.9
Aqoxy1G01668 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 7.3e-16 87.4 107 45.8
Aqoxy4G03157 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 7.3e-16 87.4 107 45.8
Aqoxy7G03988 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 7.3e-16 87.4 107 45.8
FAN23G2064 Fragaria x ananassa HOM05D004774 ORTHO05D005514 7.3e-16 87.4 122 45.1
PSO017G6900 Papaver somniferum HOM05D004774 ORTHO05D005514 7.3e-16 87.4 111 44.1
C08p51000 Brassica napus HOM05D004774 ORTHO05D005514 1.2e-15 86.7 105 41.0
BolC8t52628H Brassica oleracea HOM05D004774 ORTHO05D005514 1.2e-15 86.7 105 41.0
PGR119G0353 Punica granatum HOM05D004774 ORTHO05D005514 1.2e-15 86.7 113 42.5
Medtr8g072680 Medicago truncatula HOM05D004774 ORTHO05D005514 4.7e-15 84.7 106 44.3
VMungo1309G2525 Vigna mungo HOM05D004774 ORTHO05D005514 6.2e-15 84.3 118 40.7
VMungo0331G0358 Vigna mungo HOM05D002747 ORTHO05D005514 1.1e-14 83.6 118 40.7
Potri.002G044500 Populus trichocarpa HOM05D004774 ORTHO05D005514 2.4e-14 82.4 104 42.3
Sabra02G0035700 Salix brachista HOM05D004774 ORTHO05D005514 2.4e-14 82.4 106 42.5
CARHR006490 Cardamine hirsuta HOM05D004774 ORTHO05D005514 4.0e-14 81.6 104 39.4
Sed0022653 Sechium edule HOM05D004774 ORTHO05D005514 4.0e-14 81.6 121 37.2
Phvul.010G020150 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 5.2e-14 81.3 118 39.0
Phvul.010G020200 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 5.2e-14 81.3 118 39.0
CsaV3_7G030220 Cucumis sativus L. HOM05D004774 ORTHO05D005514 1.2e-13 80.1 123 37.4
unitig_0.g1128 Utricularia gibba HOM05D004774 ORTHO05D005514 1.5e-13 79.7 95 42.1
HanXRQChr14g0454071 Helianthus annuus HOM05D004774 ORTHO05D005514 2.0e-13 79.3 107 38.3
ECA247G2354 Erigeron canadensis HOM05D002220 ORTHO05D008182 2.6e-13 79.0 101 42.6
arahy.Tifrunner.gnm1.ann1.SKV00U Arachis hypogaea HOM05D004774 ORTHO05D005514 4.4e-13 78.2 86 43.0
vmacro02628 Vaccinium macrocarpon HOM05D004774 ORTHO05D005514 9.9e-13 77.0 98 42.9
MBI04_g06856_MAGBIO Magnolia biondii HOM05D004774 ORTHO05D005514 1.7e-12 76.3 105 38.1
BcaC07g42048 Brassica carinata HOM05D004774 ORTHO05D005514 4.9e-12 74.7 95 38.9
MELO3C023634.2 Cucumis melo HOM05D004774 ORTHO05D005514 1.4e-11 73.2 117 36.8
Rhsim13G0031100 Rhododendron simsii HOM05D004774 ORTHO05D005514 1.4e-11 73.2 98 39.8
FAN16G3049 Fragaria x ananassa HOM05D004774 ORTHO05D005514 2.4e-11 72.4 59 59.3
AagrBONN_evm.TU.Sc2ySwM_344.4376 Anthoceros agrestis HOM05D004774 ORTHO05D005514 4.2e-11 71.6 105 37.1
ClCG09G004860 Citrullus lanatus HOM05D004774 ORTHO05D005514 5.4e-11 71.2 121 33.9
Pp3c7_17850 Physcomitrium patens HOM05D004774 ORTHO05D005514 1.2e-10 70.1 106 34.9
SGA_v2.0_scaffold138G35272 Striga asiatica HOM05D004774 ORTHO05D005514 1.2e-10 70.1 134 34.3
SEGI_28935 Sequoiadendron giganteum HOM05D004774 ORTHO05D005514 1.6e-10 69.7 118 34.7
Glyma.03G218500 Glycine max HOM05D004774 ORTHO05D005514 2.1e-10 69.3 119 34.5
Mapoly0050s0102 Marchantia polymorpha HOM05D004774 ORTHO05D005514 3.5e-10 68.6 105 33.3
SEGI_34955 Sequoiadendron giganteum HOM05D004774 ORTHO05D005514 1.0e-09 67.0 102 38.2
Glyma.19G215300 Glycine max HOM05D004774 ORTHO05D005514 1.3e-09 66.6 119 34.5
Os07g0477000 Oryza sativa ssp. japonica HOM05D004774 ORTHO05D005514 3.9e-09 65.1 101 38.6
CDE07G0321 Ceratophyllum demersum HOM05D004774 ORTHO05D005514 5.1e-09 64.7 115 31.3
GSVIVG01018600001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.6e-07 59.7 53 47.2
HPP92_027004 Vanilla planifolia HOM05D004774 ORTHO05D005514 2.1e-07 59.3 105 35.2
HPP92_015388 Vanilla planifolia HOM05D004774 ORTHO05D005514 3.6e-07 58.5 105 34.3
Lj4A469T41 Lonicera japonica HOM05D004774 ORTHO05D005514 6.2e-07 57.8 52 53.8
GSVIVG01000732001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.1e-06 57.0 46 50.0
Sc04g0000740 Simmondsia chinensis HOM05D004774 ORTHO05D005514 1.4e-06 56.6 105 35.2
Cre12.g538400 Chlamydomonas reinhardtii HOM05D004774 ORTHO05D005514 1.8e-06 56.2 116 33.6
TPR.G27925 Trifolium pratense HOM05D004774 ORTHO05D005514 1.8e-06 56.2 66 42.4
Ca_27275_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 2.4e-06 55.8 81 37.0
GSVIVG01034583001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.0e-06 55.1 56 48.2
SHI09938 Sapria himalayana HOM05D004774 ORTHO05D000023 5.3e-06 54.7 57 49.1


User provided reference genes

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