Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 0.0e+00 1213.7 605 100.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 2.9e-311 1071.2 609 87.4
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 9.1e-310 1066.2 614 86.8
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 3.6e-306 1054.3 610 86.6
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 2.0e-304 1048.5 609 85.7
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 2.0e-304 1048.5 609 85.7
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 1.1e-302 1042.7 612 86.6
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 7.0e-302 1040.0 608 86.0
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 7.7e-301 1036.6 610 84.3
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 4.2e-299 1030.8 610 84.3
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 2.3e-297 1025.0 614 84.4
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 5.2e-297 1023.8 604 83.9
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.5e-296 1022.3 620 84.0
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 1.1e-294 1016.1 610 82.8
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 1.1e-294 1016.1 586 85.5
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.6e-293 1012.3 610 82.8
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 5.9e-293 1010.4 610 82.6
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 2.9e-292 1008.1 610 82.3
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 3.8e-292 1007.7 609 82.1
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 5.0e-292 1007.3 613 82.5
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.5e-291 1005.7 611 82.5
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 3.3e-291 1004.6 639 80.8
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 7.2e-291 1003.4 625 81.1
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 1.5e-288 995.7 608 81.2
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 2.0e-288 995.3 610 81.5
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 7.5e-288 993.4 609 81.1
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 9.8e-288 993.0 610 80.5
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 3.2e-286 988.0 610 80.7
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 1.2e-285 986.1 610 81.1
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 2.7e-285 984.9 610 79.8
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 1.1e-283 979.5 610 81.0
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 9.5e-283 976.5 609 80.1
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 1.6e-282 975.7 650 76.8
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 8.9e-281 969.9 597 80.6
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 4.4e-280 967.6 606 79.7
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 6.4e-279 963.8 599 80.3
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 1.1e-278 963.0 606 79.2
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 3.2e-278 961.4 605 78.3
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 1.2e-277 959.5 600 79.5
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 2.7e-277 958.4 609 78.2
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 2.3e-276 955.3 609 78.7
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 4.7e-274 947.6 591 81.4
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 2.3e-273 945.3 605 79.2
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 6.8e-273 943.7 605 79.2
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.2e-272 943.0 612 77.9
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 2.0e-272 942.2 612 77.6
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 2.9e-271 938.3 611 77.6
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 2.9e-271 938.3 610 77.5
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 4.9e-271 937.6 585 80.3
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 1.9e-270 935.6 610 77.2
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 1.0e-268 929.9 604 77.5
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 1.3e-268 929.5 524 85.9
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.8e-265 919.1 612 76.5
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 2.9e-263 911.8 635 74.2
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 8.4e-263 910.2 699 69.4
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 1.1e-262 909.8 781 63.3
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 2.4e-262 908.7 551 81.3
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 2.1e-261 905.6 612 75.2
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 1.0e-260 903.3 598 75.6
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 1.7e-260 902.5 609 75.5
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 2.3e-260 902.1 608 75.7
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 8.6e-260 900.2 532 83.3
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 1.2e-258 896.3 602 76.4
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 3.6e-258 894.8 603 75.1
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 6.8e-257 890.6 617 74.4
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 1.5e-256 889.4 590 76.1
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 1.3e-255 886.3 576 77.8
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 5.4e-254 880.9 610 73.6
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 1.2e-253 879.8 591 75.8
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 5.1e-252 874.4 612 73.2
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 6.6e-252 874.0 609 72.9
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 4.8e-250 867.8 609 74.1
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 3.1e-249 865.1 587 74.4
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 4.0e-249 864.8 630 70.8
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 6.9e-249 864.0 587 74.6
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 2.0e-248 862.4 629 70.6
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 2.6e-248 862.1 590 74.7
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 7.6e-248 860.5 634 70.3
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 8.4e-247 857.1 511 81.8
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 2.1e-242 842.4 615 70.4
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 5.8e-240 834.3 520 79.8
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 2.2e-239 832.4 612 69.8
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.1e-234 815.8 585 71.5
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.1e-233 813.5 740 60.0
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 1.8e-233 812.8 619 69.8
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 4.2e-230 801.6 520 77.7
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 4.6e-229 798.1 593 68.8
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 1.0e-223 780.4 591 68.0
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 2.2e-223 779.2 662 65.6
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 2.2e-223 779.2 458 83.6
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 5.7e-219 764.6 590 68.5
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 2.0e-211 739.6 607 64.9
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 2.7e-205 719.2 524 67.6
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 2.6e-203 712.6 470 77.0
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 1.2e-200 703.7 557 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 6.5e-199 698.0 560 61.6
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 4.1e-193 678.7 539 62.7
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 7.0e-193 677.9 512 65.6
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 2.0e-187 659.8 451 74.3
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 1.8e-177 626.7 415 75.4
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 1.1e-153 547.7 385 71.7
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 1.0e-143 514.6 334 78.1
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 1.1e-140 504.6 270 85.9
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 1.6e-136 490.7 287 86.1
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.7e-128 463.4 309 75.4
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 1.8e-124 450.7 562 46.3
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.0e-114 418.3 351 64.4
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 8.7e-103 378.6 252 75.0
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.4e-100 371.3 258 72.5
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 3.4e-91 340.1 187 87.2
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 6.7e-87 325.9 283 60.1
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 1.9e-81 307.8 224 73.7
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 1.2e-72 278.5 181 75.7
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 4.0e-71 273.5 419 38.9
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 3.6e-56 223.8 375 40.0
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 2.3e-55 221.1 108 89.8
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 2.2e-53 214.5 133 79.7
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 3.2e-52 210.7 176 63.6
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 5.6e-49 199.9 160 68.1
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 4.7e-48 196.8 137 73.7
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 7.5e-46 189.5 189 58.2
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 9.2e-44 182.6 175 61.7
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 1.3e-37 162.2 109 65.1
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 2.5e-25 121.3 267 30.7
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 4.3e-25 120.6 66 81.8
QL04p021235 Quercus lobata HOM05D006110 ORTHO05D011410 3.5e-11 74.3 51 82.4
GSVIVG01036616001 Vitis vinifera HOM05D006110 ORTHO05D007774 7.6e-06 56.6 66 54.5


User provided reference genes

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