Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G064500 Prunus persica HOM05D003434 ORTHO05D334372 6.9e-44 180.3 91 100.0
Prupe.4G185500 Prunus persica HOM05D003434 ORTHO05D004465 2.1e-24 115.5 67 94.0
Prupe.7G132600 Prunus persica HOM05D003434 ORTHO05D335778 4.8e-21 104.4 56 96.4
RcHm_v2.0_Chr5g0034581 Rosa chinensis HOM05D003434 ORTHO05D004465 9.3e-17 90.1 66 74.2
MD11G1241800 Malus domestica HOM05D003434 ORTHO05D004465 2.3e-15 85.5 67 76.1
FAN25G0934 Fragaria x ananassa HOM05D003434 ORTHO05D004465 8.8e-15 83.6 67 71.6
FAN21G0310 Fragaria x ananassa HOM05D003434 ORTHO05D004465 1.5e-14 82.8 67 70.1
FvH4_3g20570 Fragaria vesca HOM05D003434 ORTHO05D004465 1.9e-14 82.4 67 71.6
FAN11G3195 Fragaria x ananassa HOM05D003434 ORTHO05D004465 1.9e-14 82.4 67 71.6
SalBow4G3038 Salvia bowleyana HOM05D003434 ORTHO05D004465 2.5e-14 82.0 66 66.7
FAN16G2559 Fragaria x ananassa HOM05D003434 ORTHO05D004465 3.3e-14 81.6 67 70.1
SalBow6G7052 Salvia bowleyana HOM05D003434 ORTHO05D004465 5.7e-14 80.9 66 66.7
C01p49000 Brassica napus HOM05D003434 ORTHO05D004465 2.2e-13 79.0 67 65.7
BolC1t04864H Brassica oleracea HOM05D003434 ORTHO05D004465 2.2e-13 79.0 67 65.7
Oeu011677.2 Olea europaea HOM05D003434 ORTHO05D004465 2.8e-13 78.6 66 66.7
Lalb_Chr04g0258261 Lupinus albus HOM05D003434 ORTHO05D004465 3.7e-13 78.2 66 62.1
Rhsim06G0196400 Rhododendron simsii HOM05D003434 ORTHO05D004465 3.7e-13 78.2 65 67.7
A01p38760 Brassica napus HOM05D003434 ORTHO05D004465 6.3e-13 77.4 67 62.7
CANSAT78G2387 Cannabis sativa HOM05D003434 ORTHO05D004465 6.3e-13 77.4 66 62.1
MD03G1224000 Malus domestica HOM05D003434 ORTHO05D004465 6.3e-13 77.4 67 70.1
BcaB06g29576 Brassica carinata HOM05D003434 ORTHO05D004465 8.2e-13 77.0 70 64.3
BcaC09g48510 Brassica carinata HOM05D003434 ORTHO05D004465 8.2e-13 77.0 70 62.9
C05p51700 Brassica napus HOM05D003434 ORTHO05D004465 8.2e-13 77.0 70 64.3
BolC5t33857H Brassica oleracea HOM05D003434 ORTHO05D004465 8.2e-13 77.0 70 64.3
Carub.0003s1518 Capsella rubella HOM05D003434 ORTHO05D004465 8.2e-13 77.0 67 65.7
Sp3g13710 Schrenkiella parvula HOM05D003434 ORTHO05D004465 8.2e-13 77.0 69 63.8
ECA236G4345 Erigeron canadensis HOM05D003434 ORTHO05D004465 1.1e-12 76.6 66 69.7
BcaB04g20924 Brassica carinata HOM05D003434 ORTHO05D004465 1.4e-12 76.3 67 64.2
Haze_07077 Corylus avellana HOM05D003434 ORTHO05D004465 1.4e-12 76.3 66 62.1
Sc21g0001090 Simmondsia chinensis HOM05D003434 ORTHO05D004465 1.4e-12 76.3 66 60.6
Cfa020548 Carpinus fangiana HOM05D003434 ORTHO05D004465 1.8e-12 75.9 66 60.6
BcaC01g03873 Brassica carinata HOM05D003434 ORTHO05D004465 2.4e-12 75.5 66 63.6
C03p47690 Brassica napus HOM05D003434 ORTHO05D004465 2.4e-12 75.5 66 63.6
CARHR090510 Cardamine hirsuta HOM05D003434 ORTHO05D004465 3.1e-12 75.1 67 62.7
Haze_09473 Corylus avellana HOM05D003434 ORTHO05D004465 3.1e-12 75.1 66 60.6
Haze_09477 Corylus avellana HOM05D003434 ORTHO05D004465 3.1e-12 75.1 66 60.6
Lj8A158G80 Lonicera japonica HOM05D003434 ORTHO05D004465 4.1e-12 74.7 67 64.2
CSS0016315 Camellia sinensis var. sinensis HOM05D003434 ORTHO05D004465 5.3e-12 74.3 66 65.2
Gorai.007G319600 Gossypium raimondii HOM05D003434 ORTHO05D004465 5.3e-12 74.3 70 61.4
Nitab4.5_0000677g0140 Nicotiana tabacum HOM05D003434 ORTHO05D004465 5.3e-12 74.3 66 60.6
vmacro19412 Vaccinium macrocarpon HOM05D003434 ORTHO05D004465 6.9e-12 73.9 65 66.2
CARHR043150 Cardamine hirsuta HOM05D003434 ORTHO05D004465 9.1e-12 73.6 69 62.3
Hund24214 Selenicereus undatus HOM05D003434 ORTHO05D004465 9.1e-12 73.6 67 64.2
Hund31009 Selenicereus undatus HOM05D003434 ORTHO05D023136 9.1e-12 73.6 67 64.2
GSVIVG01028448001 Vitis vinifera HOM05D003434 ORTHO05D004465 9.1e-12 73.6 67 62.7
AL3G28010 Arabidopsis lyrata HOM05D003434 ORTHO05D004465 1.2e-11 73.2 66 60.6
A03p39310 Brassica napus HOM05D003434 ORTHO05D004465 1.2e-11 73.2 66 62.1
BraA03t13081Z Brassica rapa HOM05D003434 ORTHO05D004465 1.2e-11 73.2 66 62.1
Gohir.A11G282773 Gossypium hirsutum HOM05D003434 ORTHO05D004465 1.2e-11 73.2 70 60.0
Gohir.D11G296500 Gossypium hirsutum HOM05D003434 ORTHO05D004465 1.2e-11 73.2 70 61.4
SGA_v2.0_scaffold9G04937 Striga asiatica HOM05D003434 ORTHO05D004465 1.2e-11 73.2 66 63.6
COL.COLO4_09433 Corchorus olitorius HOM05D003434 ORTHO05D004465 1.5e-11 72.8 71 62.0
Duzib170G0474 Durio zibethinus HOM05D003434 ORTHO05D004465 1.5e-11 72.8 70 61.4
A05p33960 Brassica napus HOM05D003434 ORTHO05D004465 2.0e-11 72.4 70 64.3
BolC3t17044H Brassica oleracea HOM05D003434 ORTHO05D004465 2.0e-11 72.4 66 62.1
BraA05t22218Z Brassica rapa HOM05D003434 ORTHO05D004465 2.0e-11 72.4 70 64.3
Carub.0001s4208 Capsella rubella HOM05D003434 ORTHO05D004465 2.6e-11 72.0 69 60.9
Thhalv10011666m.g Eutrema salsugineum HOM05D003434 ORTHO05D004465 2.6e-11 72.0 68 61.8
Gohir.A04G028400 Gossypium hirsutum HOM05D003434 ORTHO05D004465 2.6e-11 72.0 69 59.4
THA.LOC104818062 Tarenaya hassleriana HOM05D003434 ORTHO05D004465 2.6e-11 72.0 67 59.7
THA.LOC104815549 Tarenaya hassleriana HOM05D003434 ORTHO05D004465 3.4e-11 71.6 67 61.2
BcaB06g29579 Brassica carinata HOM05D003434 ORTHO05D004465 4.5e-11 71.2 69 63.8
Oeu019344.1 Olea europaea HOM05D003434 ORTHO05D004465 4.5e-11 71.2 66 63.6
Sp1g39500 Schrenkiella parvula HOM05D003434 ORTHO05D004465 4.5e-11 71.2 69 59.4
Aa31LG8G2690 Aethionema arabicum HOM05D003434 ORTHO05D004465 5.9e-11 70.9 67 65.7
Cc05_g12350 Coffea canephora HOM05D003434 ORTHO05D004465 5.9e-11 70.9 66 60.6
ClCG01G010880 Citrullus lanatus HOM05D003434 ORTHO05D004465 7.7e-11 70.5 70 55.7
Nitab4.5_0000826g0070 Nicotiana tabacum HOM05D003434 ORTHO05D004465 7.7e-11 70.5 66 59.1
Nitab4.5_0001618g0180 Nicotiana tabacum HOM05D003434 ORTHO05D004465 7.7e-11 70.5 66 59.1
AL1G61260 Arabidopsis lyrata HOM05D003434 ORTHO05D004465 1.0e-10 70.1 69 59.4
Thhalv10021159m.g Eutrema salsugineum HOM05D003434 ORTHO05D004465 1.0e-10 70.1 69 60.9
Lj1g0009928 Lotus japonicus HOM05D003434 ORTHO05D004465 1.0e-10 70.1 71 59.2
Hund24220 Selenicereus undatus HOM05D003434 ORTHO05D004465 1.0e-10 70.1 67 62.7
Hund24225 Selenicereus undatus HOM05D003434 ORTHO05D023136 1.0e-10 70.1 67 62.7
Duzib213G0358 Durio zibethinus HOM05D003434 ORTHO05D004465 1.3e-10 69.7 69 56.5
HanXRQChr12g0374331 Helianthus annuus HOM05D003434 ORTHO05D004465 1.7e-10 69.3 66 60.6
PSO832G4191 Papaver somniferum HOM05D003434 ORTHO05D004465 2.2e-10 68.9 68 60.3
Phvul.008G022900 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 2.2e-10 68.9 70 60.0
TPR.G38897 Trifolium pratense HOM05D003434 ORTHO05D004465 2.2e-10 68.9 90 51.1
Glyma.18G278000 Glycine max HOM05D003434 ORTHO05D004465 2.9e-10 68.6 67 55.2
PSO017G4384 Papaver somniferum HOM05D003434 ORTHO05D004465 2.9e-10 68.6 69 60.9
PSO170G0766 Papaver somniferum HOM05D003434 ORTHO05D004465 2.9e-10 68.6 66 63.6
PSO210G2253 Papaver somniferum HOM05D003434 ORTHO05D004465 2.9e-10 68.6 68 60.3
Lsat_1_v5_gn_7_105060 Lactuca sativa HOM05D003434 ORTHO05D004465 3.8e-10 68.2 66 59.1
Thecc.07G077100 Theobroma cacao HOM05D003434 ORTHO05D004465 3.8e-10 68.2 71 57.7
Cpa.g.sc80.31 Carica papaya HOM05D003434 ORTHO05D004465 5.0e-10 67.8 66 62.1
HanXRQChr10g0306991 Helianthus annuus HOM05D003434 ORTHO05D004465 5.0e-10 67.8 66 59.1
AT1G52930 Arabidopsis thaliana HOM05D003434 ORTHO05D004465 6.5e-10 67.4 69 56.5
arahy.Tifrunner.gnm1.ann1.L3HXPU Arachis hypogaea HOM05D003434 ORTHO05D004465 6.5e-10 67.4 73 56.2
arahy.Tifrunner.gnm1.ann1.LC97RS Arachis hypogaea HOM05D003434 ORTHO05D004465 6.5e-10 67.4 73 56.2
Lj1A848T59 Lonicera japonica HOM05D003434 ORTHO05D004465 6.5e-10 67.4 67 53.7
Lalb_Chr17g0340551 Lupinus albus HOM05D003434 ORTHO05D004465 6.5e-10 67.4 71 56.3
Phvul.008G022950 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 6.5e-10 67.4 70 58.6
Phvul.011G077301 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 6.5e-10 67.4 70 58.6
vmacro11838 Vaccinium macrocarpon HOM05D003434 ORTHO05D004465 8.5e-10 67.0 65 60.0
CiPaw.12G120800 Carya illinoinensis HOM05D003434 ORTHO05D004465 1.1e-09 66.6 66 56.1
Glyma.08G255000 Glycine max HOM05D003434 ORTHO05D004465 1.1e-09 66.6 68 60.3
Phvul.001G137800 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 1.1e-09 66.6 70 58.6
Hma1.2p1_0687F.1_g203600 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 1.4e-09 66.2 66 59.1
TWI38G2119 Tripterygium wilfordii HOM05D003434 ORTHO05D004465 1.4e-09 66.2 66 62.1
unitig_0.g2416 Utricularia gibba HOM05D003434 ORTHO05D004465 1.4e-09 66.2 67 58.2
Aqoxy4G01062 Aquilegia oxysepala HOM05D003434 ORTHO05D004465 1.9e-09 65.9 65 61.5
AT3G15460 Arabidopsis thaliana HOM05D003434 ORTHO05D004465 1.9e-09 65.9 67 58.2
CAN.G1237.13 Capsicum annuum HOM05D003434 ORTHO05D004465 1.9e-09 65.9 69 59.4
Hma1.2p1_3282F.1_g334840 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 1.9e-09 65.9 66 57.6
Lsat_1_v5_gn_9_57521 Lactuca sativa HOM05D003434 ORTHO05D004465 1.9e-09 65.9 66 57.6
Medtr7g069430 Medicago truncatula HOM05D003434 ORTHO05D004465 1.9e-09 65.9 66 53.0
PGR083G2248 Punica granatum HOM05D003434 ORTHO05D004465 1.9e-09 65.9 68 60.3
Ca_13044_v3 Cicer arietinum L. HOM05D003434 ORTHO05D004465 2.5e-09 65.5 69 58.0
Peaxi162Scf00069g00118 Petunia axillaris HOM05D003434 ORTHO05D004465 2.5e-09 65.5 66 60.6
Hma1.2p1_1789F.1_g302480 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 3.2e-09 65.1 66 57.6
MBI01_g15748_MAGBIO Magnolia biondii HOM05D003434 ORTHO05D004465 3.2e-09 65.1 72 55.6
Phvul.001G138125 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 3.2e-09 65.1 70 55.7
Psat6g028560 Pisum sativum HOM05D003434 ORTHO05D004465 3.2e-09 65.1 70 58.6
Psat6g129960 Pisum sativum HOM05D003434 ORTHO05D004465 3.2e-09 65.1 71 60.6
Sopen04g008470 Solanum pennellii HOM05D003434 ORTHO05D004465 3.2e-09 65.1 66 62.1
EL10Ac9g22818 Beta vulgaris HOM05D003434 ORTHO05D004465 4.2e-09 64.7 71 54.9
Manes.12G076100 Manihot esculenta HOM05D003434 ORTHO05D004465 4.2e-09 64.7 66 57.6
Sabra16G0264800 Salix brachista HOM05D003434 ORTHO05D004465 4.2e-09 64.7 76 53.9
Hma1.2p1_2288F.1_g318950 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 5.5e-09 64.3 66 57.6
Aa31LG10G2140 Aethionema arabicum HOM05D003434 ORTHO05D004465 7.2e-09 63.9 68 57.4
Ah.01g001850 Amaranthus hybridus HOM05D003434 ORTHO05D004465 7.2e-09 63.9 71 50.7
CiPaw.11G173200 Carya illinoinensis HOM05D003434 ORTHO05D004465 7.2e-09 63.9 66 59.1
Ciclev10008977m.g Citrus clementina HOM05D003434 ORTHO05D004465 7.2e-09 63.9 66 56.1
Medtr1g012990 Medicago truncatula HOM05D003434 ORTHO05D004465 7.2e-09 63.9 68 52.9
Solyc04g016380.3 Solanum lycopersicum HOM05D003434 ORTHO05D004465 7.2e-09 63.9 66 60.6
PGSC0003DMG400012714 Solanum tuberosum HOM05D003434 ORTHO05D004465 7.2e-09 63.9 66 60.6
Potri.011G122200 Populus trichocarpa HOM05D003434 ORTHO05D004465 1.2e-08 63.2 70 55.7
Sabra11G0108200 Salix brachista HOM05D003434 ORTHO05D002822 1.2e-08 63.2 70 55.7
CsaV3_2G014790 Cucumis sativus L. HOM05D003434 ORTHO05D004465 1.6e-08 62.8 67 53.7
CsaV3_7G022570 Cucumis sativus L. HOM05D003434 ORTHO05D004465 1.6e-08 62.8 67 53.7
Potri.001G403100 Populus trichocarpa HOM05D003434 ORTHO05D004465 1.6e-08 62.8 70 55.7
Sed0012815 Sechium edule HOM05D003434 ORTHO05D004465 1.6e-08 62.8 66 57.6
Eucgr.F01099 Eucalyptus grandis HOM05D003434 ORTHO05D004465 2.1e-08 62.4 69 52.2
VMungo1383G3569 Vigna mungo HOM05D003434 ORTHO05D004465 2.1e-08 62.4 70 55.7
Sed0008309 Sechium edule HOM05D003434 ORTHO05D004465 3.6e-08 61.6 67 53.7
Glyma.02G114000 Glycine max HOM05D003434 ORTHO05D004465 4.7e-08 61.2 67 52.2
QL08p019759 Quercus lobata HOM05D003434 ORTHO05D004465 4.7e-08 61.2 66 57.6
ClCG03G016840 Citrullus lanatus HOM05D003434 ORTHO05D004465 6.1e-08 60.8 67 53.7
TAR626G1243 Trochodendron aralioides HOM05D003434 ORTHO05D004465 6.1e-08 60.8 67 56.7
Ca_05552_v3 Cicer arietinum L. HOM05D003434 ORTHO05D004465 7.9e-08 60.5 72 56.9
DCAR_019542 Daucus carota HOM05D003434 ORTHO05D004465 1.4e-07 59.7 66 56.1
DCAR_019543 Daucus carota HOM05D003434 ORTHO05D004465 1.4e-07 59.7 66 56.1
TAR624G0430 Trochodendron aralioides HOM05D003434 ORTHO05D004465 1.4e-07 59.7 66 56.1
MELO3C015338.2 Cucumis melo HOM05D003434 ORTHO05D004465 2.3e-07 58.9 67 53.7
Nn1g07032 Nelumbo nucifera HOM05D003434 ORTHO05D004465 2.3e-07 58.9 66 54.5
HPP92_020071 Vanilla planifolia HOM05D003434 ORTHO05D004465 2.3e-07 58.9 63 57.1
Migut.H01924 Erythranthe guttata HOM05D003434 ORTHO05D004465 3.0e-07 58.5 68 55.9
ATR0605G144 Amborella trichopoda HOM05D003434 ORTHO05D004465 8.8e-07 57.0 66 56.1
Peaxi162Scf00130g00826 Petunia axillaris HOM05D003434 ORTHO05D004465 1.1e-06 56.6 66 56.1
TPR.G27919 Trifolium pratense HOM05D003434 ORTHO05D004465 2.0e-06 55.8 74 52.7
Zm00001eb245760 Zea mays HOM05D003434 ORTHO05D004465 2.6e-06 55.5 72 48.6


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